RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 DDX4Q9NQI0 724 aaKnown RBP13.42□□□□□ -0.26
ATRX-213ENST00000624032 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
ATRX-213ENST00000624032 MTMR6Q9Y217 621 aa13.42□□□□□ -0.26
ATRX-213ENST00000624032 B4E1Z4 1266 aa13.42□□□□□ -0.26
ATRX-213ENST00000624032 GJB2P29033 226 aa13.42□□□□□ -0.26
ATRX-213ENST00000624032 NFIAQ12857 509 aa13.42□□□□□ -0.26
ATRX-213ENST00000624032 TDRD3Q9H7E2 651 aaKnown RBP13.42□□□□□ -0.26
ATRX-213ENST00000624032 TOMM22Q9NS69 142 aa13.42□□□□□ -0.26
ATRX-213ENST00000624032 SERPINA10Q9UK55 444 aa13.42□□□□□ -0.26
ATRX-213ENST00000624032 FLT1P17948 1338 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 FZD9O00144 591 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 PRDM1O75626 825 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 WDHD1O75717 1129 aaPredicted RBP13.41□□□□□ -0.26
ATRX-213ENST00000624032 PLCG2P16885 1265 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 NCBP1Q09161 790 aaKnown RBP13.41□□□□□ -0.26
ATRX-213ENST00000624032 SBF1O95248 1867 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 SMTNL1A8MU46 457 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 DTNBO60941 627 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 LMNB1P20700 586 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 PLCD1P51178 756 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 MAP3K11Q16584 847 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 AKNAD1Q5T1N1 836 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 Q6ZUG5 572 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 CYB5R4Q7L1T6 521 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
ATRX-213ENST00000624032 DYNLL2Q96FJ2 89 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 MYO3BQ8WXR4 1341 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 EIF6P56537 245 aaKnown RBP13.41□□□□□ -0.26
ATRX-213ENST00000624032 ANTXR2P58335 489 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 HDLBPQ00341 1268 aaKnown RBP13.41□□□□□ -0.26
ATRX-213ENST00000624032 TOB2Q14106 344 aaPredicted RBP13.41□□□□□ -0.26
ATRX-213ENST00000624032 TNIP1Q15025 636 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 MFSD6Q6ZSS7 791 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 CCDC83Q8IWF9 413 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 ZFPM1Q8IX07 1006 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 MB21D2Q8IYB1 491 aaPredicted RBP13.41□□□□□ -0.26
ATRX-213ENST00000624032 NCOA7Q8NI08 942 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 MRIQ9BWK5 157 aa13.41□□□□□ -0.26
ATRX-213ENST00000624032 NAV1Q8NEY1 1877 aa13.4□□□□□ -0.26
ATRX-213ENST00000624032 LARGE1O95461 756 aa13.4□□□□□ -0.26
ATRX-213ENST00000624032 EXOSC10Q01780 885 aaKnown RBP13.4□□□□□ -0.26
ATRX-213ENST00000624032 GPR162Q16538 588 aa13.4□□□□□ -0.26
ATRX-213ENST00000624032 RALYLQ86SE5 291 aaKnown RBP13.4□□□□□ -0.26
ATRX-213ENST00000624032 AGBL3Q8NEM8 1001 aa13.4□□□□□ -0.26
ATRX-213ENST00000624032 ZSCAN31Q96LW9 406 aaPredicted RBP13.4□□□□□ -0.26
ATRX-213ENST00000624032 NUP62CLQ9H1M0 184 aa13.4□□□□□ -0.26
ATRX-213ENST00000624032 VPS37CA5D8V6 355 aaPredicted RBP13.4□□□□□ -0.26
ATRX-213ENST00000624032 POLR3DP05423 398 aaPredicted RBP13.4□□□□□ -0.26
ATRX-213ENST00000624032 GMPSP49915 693 aaPredicted RBP13.4□□□□□ -0.26
ATRX-213ENST00000624032 TCP10Q12799 353 aa13.4□□□□□ -0.26
ATRX-213ENST00000624032 RBM26Q5T8P6 1007 aaKnown RBP13.4□□□□□ -0.26
ATRX-213ENST00000624032 TAF3Q5VWG9 929 aa13.4□□□□□ -0.26
ATRX-213ENST00000624032 OGFOD1Q8N543 542 aa13.4□□□□□ -0.26
ATRX-213ENST00000624032 SH2B1Q9NRF2 756 aaPredicted RBP13.4□□□□□ -0.26
ATRX-213ENST00000624032 EGFRP00533 1210 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 SLURP2P0DP57 97 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 TYRO3Q06418 890 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 TRDNQ13061 729 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 C12orf60Q5U649 245 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 CCDC186Q7Z3E2 898 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 DRC7Q8IY82 874 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 STAG1Q8WVM7 1258 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 ARPP21Q9UBL0 812 aaPredicted RBP13.39□□□□□ -0.27
ATRX-213ENST00000624032 ANAPC4Q9UJX5 808 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 CLRN2A0PK11 232 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 PRC1O43663 620 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 SBK1Q52WX2 424 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 SLC44A5Q8NCS7 719 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 C16orf45Q96MC5 204 aaPredicted RBP13.39□□□□□ -0.27
ATRX-213ENST00000624032 HDAC9Q9UKV0 1011 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 TPCN1Q9ULQ1 816 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 MRVI1Q9Y6F6 885 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 ECM29Q5VYK3 1845 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 MYH1P12882 1939 aa13.39□□□□□ -0.27
ATRX-213ENST00000624032 FGD1P98174 961 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 DLGAP5Q15398 846 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 ZNF771Q7L3S4 317 aaPredicted RBP13.38□□□□□ -0.27
ATRX-213ENST00000624032 LUZP1Q86V48 1076 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 CERS3Q8IU89 383 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 BRF1Q92994 677 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 ZKSCAN3Q9BRR0 538 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 ZSWIM5Q9P217 1185 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 CGNQ9P2M7 1197 aaKnown RBP13.38□□□□□ -0.27
ATRX-213ENST00000624032 SCAF8Q9UPN6 1271 aaKnown RBP13.38□□□□□ -0.27
ATRX-213ENST00000624032 TIAM2Q8IVF5 1701 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 HMGB1P09429 215 aaKnown RBP13.38□□□□□ -0.27
ATRX-213ENST00000624032 KRT85P78386 507 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 GABPB1Q06547 395 aaPredicted RBP13.38□□□□□ -0.27
ATRX-213ENST00000624032 PAXBP1Q9Y5B6 917 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 FOCADQ5VW36 1801 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 TNNT1P13805 278 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 FAM198AQ9UFP1 575 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 LAMB1P07942 1786 aa13.38□□□□□ -0.27
ATRX-213ENST00000624032 APOBRQ0VD83 1088 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 LRMPQ12912 555 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 NBPF9Q3BBW0 867 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 C9orf131Q5VYM1 1079 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms