RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	COL2A1	P02458	1487 aa	Predicted RBP	5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171		A0A0G2JMZ2	1700 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	TCRBV5S4A2T	A0A5A2	114 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171		M0R2C6	588 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	TLR2	O60603	784 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	BAG3	O95817	575 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	ALDH1A1	P00352	501 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	POLR3D	P05423	398 aa	Predicted RBP	5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	HLA-DOA	P06340	250 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	MS4A1	P11836	297 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	CAP2	P40123	477 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	LACTB	P83111	547 aa	Predicted RBP	5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	ATP2B2	Q01814	1243 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	MAP3K12	Q12852	859 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	TRIM32	Q13049	653 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	SEPT2	Q15019	361 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	SLC9C1	Q4G0N8	1177 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	WDR78	Q5VTH9	848 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	HOOK2	Q96ED9	719 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	FAM163A	Q96GL9	167 aa	Predicted RBP	5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	FEZ1	Q99689	392 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	RIOK1	Q9BRS2	568 aa	Known RBP	5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	MRI	Q9BWK5	157 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	PUS7L	Q9H0K6	701 aa	Known RBP	5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	MCM9	Q9NXL9	1143 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	BIN2	Q9UBW5	565 aa	Predicted RBP	5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	MYPN	Q86TC9	1320 aa		5.41	□□□□□ -1.54
LINC00649-219	ENST00000622171	RANBP2	P49792	3224 aa	Known RBP	5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	LAMA4	Q16363	1823 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	CTNND1	O60716	968 aa	Known RBP	5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	PRDM1	O75626	825 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	AKR1B1	P15121	316 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	TAL1	P17542	331 aa	Predicted RBP	5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	SHMT1	P34896	483 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	ADD2	P35612	726 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	INHBE	P58166	350 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	PDE3A	Q14432	1141 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	HSP90AB4P	Q58FF6	505 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	KIAA1755	Q5JYT7	1200 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	C17orf99	Q6UX52	265 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	RASGRP2	Q7LDG7	609 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	ANKRD23	Q86SG2	305 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	SKAP1	Q86WV1	359 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	REM2	Q8IYK8	340 aa	Predicted RBP	5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	SPICE1	Q8N0Z3	855 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	ZNF280C	Q8ND82	737 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	RAET1E	Q8TD07	263 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	PARK7	Q99497	189 aa	Known RBP	5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	CRNKL1	Q9BZJ0	848 aa	Known RBP	5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	LNPK	Q9C0E8	428 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	TXNRD2	Q9NNW7	524 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	MTMR7	Q9Y216	660 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	SLC4A4	Q9Y6R1	1079 aa		5.4	□□□□□ -1.54
LINC00649-219	ENST00000622171	LCT	P09848	1927 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	SZT2	Q5T011	3432 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	USP17L5	A8MUK1	530 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	MINDY4B	A8MYZ0	360 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	RBAK-RBAKDN	I3L0D1	243 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	TNPO2	O14787	897 aa	Known RBP	5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	RAB11FIP3	O75154	756 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	BCR	P11274	1271 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	PLCG2	P16885	1265 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	ATP5J	P18859	108 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	GUCY1A2	P33402	732 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	SLC4A3	P48751	1232 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	FLT3LG	P49771	235 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	PPP4C	P60510	307 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	IRX3	P78415	501 aa	Predicted RBP	5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	KIF22	Q14807	665 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	ABCB5	Q2M3G0	1257 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	ANKRD45	Q5TZF3	282 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	POTEE	Q6S8J3	1075 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	OSBP2	Q969R2	916 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	SHISA4	Q96DD7	197 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	ZNF333	Q96JL9	665 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	NUP88	Q99567	741 aa	Predicted RBP	5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	P2RX7	Q99572	595 aa	Known RBP	5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	HAUS7	Q99871	368 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	FSD1	Q9BTV5	496 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	CFHR5	Q9BXR6	569 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	UNC93B1	Q9H1C4	597 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	PORCN	Q9H237	461 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	DCP1A	Q9NPI6	582 aa	Predicted RBP	5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	INCENP	Q9NQS7	918 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	EMILIN3	Q9NT22	766 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	TMOD4	Q9NZQ9	345 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	PI4KB	Q9UBF8	816 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	SRRD	Q9UH36	339 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	ISY1	Q9ULR0	285 aa	Known RBP	5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	AGTPBP1	Q9UPW5	1226 aa		5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171	BAZ2B	Q9UIF8	2168 aa	Known RBP	5.39	□□□□□ -1.55
LINC00649-219	ENST00000622171		A0A1W2PRG0	241 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	USP17L12	C9JPN9	530 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	USP17L21	D6R901	530 aa		5.38	□□□□□ -1.55
LINC00649-219	ENST00000622171	CXCL11	O14625	94 aa		5.38	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms