RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 CEP131Q9UPN4 1083 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 PIK3C2AO00443 1686 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 UBE2Q2LH0YL09 131 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 HLA-DOAP06340 250 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 KIF5BP33176 963 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 ZNF76P36508 570 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 KARSQ15046 597 aaKnown RBP10.32□□□□□ -0.76
GGA3-222ENST00000621217 ENOX2Q16206 610 aaKnown RBP10.32□□□□□ -0.76
GGA3-222ENST00000621217 CYB5R4Q7L1T6 521 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 CENPHQ9H3R5 247 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 SENP2Q9HC62 589 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 TNKSO95271 1327 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 USP42Q9H9J4 1324 aaKnown RBP10.31□□□□□ -0.76
GGA3-222ENST00000621217 TRIM75PA6NK02 468 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 CYP2D6P10635 497 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 KLRK1P26718 216 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 LMAN1P49257 510 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 KIAA1468Q9P260 1216 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 GJA3Q9Y6H8 435 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 JCADQ9P266 1359 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 GNG11P61952 73 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 PRKG1Q13976 671 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 UBE4AQ14139 1066 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 TXNRD1Q16881 649 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 ADALQ6DHV7 355 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 C2CD5Q86YS7 1000 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 KRI1Q8N9T8 703 aaKnown RBP10.31□□□□□ -0.76
GGA3-222ENST00000621217 WDR66Q8TBY9 1149 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 CCDC47Q96A33 483 aaKnown RBP10.31□□□□□ -0.76
GGA3-222ENST00000621217 DACH1Q9UI36 760 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 ATF5Q9Y2D1 282 aaPredicted RBP10.31□□□□□ -0.76
GGA3-222ENST00000621217 TRIM28Q13263 835 aaKnown RBP10.31□□□□□ -0.76
GGA3-222ENST00000621217 UTP14CQ5TAP6 766 aaKnown RBP10.31□□□□□ -0.76
GGA3-222ENST00000621217 TMEM87AQ8NBN3 555 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 MYRIPQ8NFW9 859 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 KNDC1Q76NI1 1749 aa10.31□□□□□ -0.76
GGA3-222ENST00000621217 CAVIN2O95810 425 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 U2AF2P26368 475 aaKnown RBP eCLIP10.3□□□□□ -0.761e-9■■■□□ 18.3
GGA3-222ENST00000621217 NAPAP54920 295 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 EN1Q05925 392 aaPredicted RBP10.3□□□□□ -0.76
GGA3-222ENST00000621217 VPS72Q15906 364 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 C3orf67Q6ZVT6 689 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 ZNF654Q8IZM8 581 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 TMTC2Q8N394 836 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 TMEM87BQ96K49 555 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 PLCD4Q9BRC7 762 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 SHTN1A0MZ66 631 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 IDEP14735 1019 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 CCT6AP40227 531 aaKnown RBP10.3□□□□□ -0.76
GGA3-222ENST00000621217 FANCCQ00597 558 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 MECOMQ03112 1051 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 UBE3CQ15386 1083 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 PIK3AP1Q6ZUJ8 805 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 ZNF34Q8IZ26 560 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 LARGE2Q8N3Y3 721 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 CPVLQ9H3G5 476 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 SERTAD1Q9UHV2 236 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 MED23Q9ULK4 1368 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 IVLP07476 585 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 DNA2P51530 1060 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 GSDMDP57764 484 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 RRAGBQ5VZM2 374 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 SLC44A5Q8NCS7 719 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 TANGO6Q9C0B7 1094 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 MAGEC2Q9UBF1 373 aaPredicted RBP10.3□□□□□ -0.76
GGA3-222ENST00000621217 RCOR1Q9UKL0 485 aa10.3□□□□□ -0.76
GGA3-222ENST00000621217 VIRMAQ69YN4 1812 aaKnown RBP10.3□□□□□ -0.76
GGA3-222ENST00000621217 NAA30Q147X3 362 aaPredicted RBP10.29□□□□□ -0.76
GGA3-222ENST00000621217 ARHGAP29Q52LW3 1261 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 LINC00301Q8NCQ3 95 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 STRBPQ96SI9 672 aaKnown RBP10.29□□□□□ -0.76
GGA3-222ENST00000621217 NUP88Q99567 741 aaPredicted RBP10.29□□□□□ -0.76
GGA3-222ENST00000621217 BLZF1Q9H2G9 400 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 BCL2L12Q9HB09 334 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 LZTFL1Q9NQ48 299 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 PPIP5K2O43314 1243 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 NMT2O60551 498 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 CTDNEP1O95476 244 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 ATP1A3P13637 1013 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 CDC27P30260 824 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 CDC25AP30304 524 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 BTDP43251 543 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 ZNF397Q8NF99 534 aaPredicted RBP10.29□□□□□ -0.76
GGA3-222ENST00000621217 FBXO3Q9UK99 471 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 ELP1O95163 1332 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 NEDD4P46934 1319 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 FAM196BA6NMK8 535 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 AP5Z1O43299 807 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 KIF23Q02241 960 aaPredicted RBP10.29□□□□□ -0.76
GGA3-222ENST00000621217 DMTNQ08495 405 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 CCDC144BQ3MJ40 725 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 WDR78Q5VTH9 848 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 CLEC4GQ6UXB4 293 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 USP40Q9NVE5 1235 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 GOLGA6L7A0A1B0GV03 622 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 KIF28PB7ZC32 967 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 N4BP3O15049 544 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 CASP1P29466 404 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 UBA7P41226 1012 aa10.29□□□□□ -0.76
GGA3-222ENST00000621217 TNNI2P48788 182 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms