RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 FANCLQ9NW38 375 aa10.48□□□□□ -0.73
RBFOX1-223ENST00000620507 BSDC1Q9NW68 430 aaPredicted RBP10.48□□□□□ -0.73
RBFOX1-223ENST00000620507 TUBB4AP04350 444 aa10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 TFAP4Q01664 338 aa10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 TRMT44Q8IYL2 757 aaKnown RBP10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 IGDCC4Q8TDY8 1250 aa10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 FERMT2Q96AC1 680 aa10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 ARPP21Q9UBL0 812 aaPredicted RBP10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 MPHOSPH10O00566 681 aaKnown RBP10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 KIF5CO60282 957 aa10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 RBM5P52756 815 aaKnown RBP eCLIP10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 ZSCAN29Q8IWY8 852 aaPredicted RBP10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 KCNQ2O43526 872 aa10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 PCP11498 1178 aaKnown RBP10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 IQCB1Q15051 598 aa10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 ZNF827Q17R98 1081 aa10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 LONRF3Q496Y0 759 aa10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 SPTLC3Q9NUV7 552 aa10.47□□□□□ -0.73
RBFOX1-223ENST00000620507 IKBKBO14920 756 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 SEMA3EO15041 775 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 SSBP05455 408 aaKnown RBP eCLIP10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 NAPAP54920 295 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 ARID5BQ14865 1188 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 DTHD1Q6ZMT9 781 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 BAG1Q99933 345 aaPredicted RBP10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 KCNF1Q9H3M0 494 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 PRDM10Q9NQV6 1147 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 SAP30BPQ9UHR5 308 aaKnown RBP10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 ZNF804BA4D1E1 1349 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 KDM3BQ7LBC6 1761 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 SPAG1Q07617 926 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 STAMQ92783 540 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 CCDC94Q9BW85 323 aaPredicted RBP10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 SENP2Q9HC62 589 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 ATP8A2Q9NTI2 1148 aa10.46□□□□□ -0.73
RBFOX1-223ENST00000620507 CAMTA2O94983 1202 aa10.46□□□□□ -0.74
RBFOX1-223ENST00000620507 EVCP57679 992 aa10.46□□□□□ -0.74
RBFOX1-223ENST00000620507 CCDC144BQ3MJ40 725 aa10.46□□□□□ -0.74
RBFOX1-223ENST00000620507 TEX35Q5T0J7 233 aa10.46□□□□□ -0.74
RBFOX1-223ENST00000620507 ENGASEQ8NFI3 743 aa10.46□□□□□ -0.74
RBFOX1-223ENST00000620507 MINPP1Q9UNW1 487 aa10.46□□□□□ -0.74
RBFOX1-223ENST00000620507 PCDHB6Q9Y5E3 794 aa10.46□□□□□ -0.74
RBFOX1-223ENST00000620507 AP5Z1O43299 807 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 WDHD1O75717 1129 aaPredicted RBP10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 PLCG2P16885 1265 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 KIF4BQ2VIQ3 1234 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 TMCO3Q6UWJ1 677 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 RBM43Q6ZSC3 357 aaKnown RBP10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 EPB41L4AQ9HCS5 686 aaPredicted RBP10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 STK36Q9NRP7 1315 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 TCHHQ07283 1943 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 MYO1BO43795 1136 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 UFL1O94874 794 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 CCDC70Q6NSX1 233 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 SAMD1Q6SPF0 538 aaPredicted RBP10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 FBXL16Q8N461 479 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 RAB34Q9BZG1 259 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 CSRNP2Q9H175 543 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 BMP2KQ9NSY1 1161 aaPredicted RBP10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 PNPLA7Q6ZV29 1317 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 F8W031 263 aaPredicted RBP10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 DDAH1O94760 285 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 KRT18P05783 430 aaKnown RBP10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 CCDC96Q2M329 555 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 DHX40Q8IX18 779 aaKnown RBP10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 TEX11Q8IYF3 940 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 TGFBRAP1Q8WUH2 860 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 CELF1Q92879 486 aaKnown RBP10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 CALML4Q96GE6 196 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 TRIM47Q96LD4 638 aa10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 SRP68Q9UHB9 627 aaKnown RBP10.45□□□□□ -0.74
RBFOX1-223ENST00000620507 SCG2P13521 617 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 ATP1A3P13637 1013 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 NAP1L1P55209 391 aaKnown RBP10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 AMPD3Q01432 767 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 PICALMQ13492 652 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 TMEM266Q2M3C6 531 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 RESP18Q5W5W9 173 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 MARCH10Q8NA82 808 aaPredicted RBP10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 MECOMQ03112 1051 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 ITPK1Q13572 414 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 MAPKAPK5Q8IW41 473 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 GOLGA6L1Q8N7Z2 621 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 TRIML1Q8N9V2 468 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 PLIN2Q99541 437 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 MTA3Q9BTC8 594 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 ZHX3Q9H4I2 956 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 C6orf50Q9HD87 102 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 JCADQ9P266 1359 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 PSMA7O14818 248 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 ARHGAP6O43182 974 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 CCDC175P0C221 793 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 EPS15P42566 896 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 PTGDRQ13258 359 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 FAM182BQ5T319 152 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 SPECC1LQ69YQ0 1117 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 SHC4Q6S5L8 630 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 PNMA1Q8ND90 353 aa10.44□□□□□ -0.74
RBFOX1-223ENST00000620507 ERO1AQ96HE7 468 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms