RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 ZNF341Q9BYN7 854 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 SLC6A16Q9GZN6 736 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 ADAMTS8Q9UP79 889 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 SYNGAP1Q96PV0 1343 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 ATP2A1O14983 1001 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 CELF2O95319 508 aaKnown RBP6.78□□□□□ -1.32
CBWD3-215ENST00000619322 SLFN5Q08AF3 891 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 KCNH6Q9H252 994 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 GPR75-ASB3A0A0A6YYF3 556 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 NR1I2O75469 434 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 PUM3Q15397 648 aaKnown RBP6.78□□□□□ -1.32
CBWD3-215ENST00000619322 RETREG3Q86VR2 466 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 GBF1Q92538 1859 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 ZC3H12CQ9C0D7 883 aaKnown RBP6.78□□□□□ -1.32
CBWD3-215ENST00000619322 PNMA2Q9UL42 364 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 ADAMTS5Q9UNA0 930 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 NR6A1Q15406 480 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 LPIN2Q92539 896 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 SNCAIPQ9Y6H5 919 aa6.78□□□□□ -1.32
CBWD3-215ENST00000619322 KMT2EQ8IZD2 1858 aa6.77□□□□□ -1.32
CBWD3-215ENST00000619322 PAPLNO95428 1278 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 FMNL1O95466 1100 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-215ENST00000619322 WDR43Q15061 677 aaKnown RBP eCLIP6.77□□□□□ -1.33
CBWD3-215ENST00000619322 GPAT2Q6NUI2 795 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 NYAP1Q6ZVC0 841 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 FASTKD5Q7L8L6 764 aaKnown RBP6.77□□□□□ -1.33
CBWD3-215ENST00000619322 MAGEB6Q8N7X4 407 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 ZMYND15Q9H091 742 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 DENND2AQ9ULE3 1009 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 TNKSO95271 1327 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 PPM1GO15355 546 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-215ENST00000619322 TLR2O60603 784 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 GJA8P48165 433 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 LBX1P52954 281 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 USP46P62068 366 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 TWISTNBQ3B726 338 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-215ENST00000619322 SPTY2D1Q68D10 685 aaPredicted RBP6.77□□□□□ -1.33
CBWD3-215ENST00000619322 KRT26Q7Z3Y9 468 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 TRIM34Q9BYJ4 488 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 ZBTB3Q9H5J0 574 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 OGDHLQ9ULD0 1010 aa6.77□□□□□ -1.33
CBWD3-215ENST00000619322 LAS1LQ9Y4W2 734 aaKnown RBP6.77□□□□□ -1.33
CBWD3-215ENST00000619322 CTNND1O60716 968 aaKnown RBP6.76□□□□□ -1.33
CBWD3-215ENST00000619322 CST5P28325 142 aaPredicted RBP6.76□□□□□ -1.33
CBWD3-215ENST00000619322 CHRNDQ07001 517 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 RBL2Q08999 1139 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 LINC01559Q495D7 138 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 TATDN1Q6P1N9 297 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 GIMAP6Q6P9H5 292 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 MORC4Q8TE76 937 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 DHX36Q9H2U1 1008 aaKnown RBP6.76□□□□□ -1.33
CBWD3-215ENST00000619322 ZNF70Q9UC06 446 aaPredicted RBP6.76□□□□□ -1.33
CBWD3-215ENST00000619322 PDE8BO95263 885 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 GSTO1P78417 241 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 CERS5Q8N5B7 392 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 C8orf58Q8NAV2 365 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 STK31Q9BXU1 1019 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 API5Q9BZZ5 524 aaKnown RBP6.76□□□□□ -1.33
CBWD3-215ENST00000619322 MAP3K2Q9Y2U5 619 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 DXOO77932 396 aaKnown RBP6.76□□□□□ -1.33
CBWD3-215ENST00000619322 UFL1O94874 794 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 HOXD10P28358 340 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 IL15P40933 162 aaPredicted RBP6.76□□□□□ -1.33
CBWD3-215ENST00000619322 CAP1Q01518 475 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 SOCS4Q8WXH5 440 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 GGA3Q9NZ52 723 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 AFG3L2Q9Y4W6 797 aa6.76□□□□□ -1.33
CBWD3-215ENST00000619322 C19orf81C9J6K1 198 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 HNRNPUQ00839 825 aaKnown RBP eCLIP6.75□□□□□ -1.33
CBWD3-215ENST00000619322 FAM110CQ1W6H9 321 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 ATG9AQ7Z3C6 839 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 ZFYVE28Q9HCC9 887 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 TRIM67Q6ZTA4 783 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 OTOP1Q7RTM1 612 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 UPF3AQ9H1J1 476 aaKnown RBP6.75□□□□□ -1.33
CBWD3-215ENST00000619322 MROH7-TTC4A0A0A0MT08 1334 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 MYO1BO43795 1136 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 ITGA6P23229 1130 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 GJA5P36382 358 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 SKOR1P84550 965 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 PABPC4Q13310 644 aaKnown RBP eCLIP6.75□□□□□ -1.33
CBWD3-215ENST00000619322 SNAPC2Q13487 334 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 SHISA4Q96DD7 197 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 FAM84BQ96KN1 310 aaPredicted RBP6.75□□□□□ -1.33
CBWD3-215ENST00000619322 PARK7Q99497 189 aaKnown RBP6.75□□□□□ -1.33
CBWD3-215ENST00000619322 NUDT12Q9BQG2 462 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 DEFB129Q9H1M3 183 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 MRS2Q9HD23 443 aa6.75□□□□□ -1.33
CBWD3-215ENST00000619322 AOX1Q06278 1338 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 TNFRSF10AO00220 468 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 GJB1P08034 283 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 MMP16P51512 607 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 APOBEC3HQ6NTF7 200 aaKnown RBP6.74□□□□□ -1.33
CBWD3-215ENST00000619322 TSEN34Q9BSV6 310 aaKnown RBP6.74□□□□□ -1.33
CBWD3-215ENST00000619322 CHMP4BQ9H444 224 aaKnown RBP6.74□□□□□ -1.33
CBWD3-215ENST00000619322 GREM2Q9H772 168 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 MKRN1Q9UHC7 482 aaKnown RBP6.74□□□□□ -1.33
CBWD3-215ENST00000619322 MSCO60682 206 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 UQCRFS1P1P0C7P4 283 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 C4orf48Q5BLP8 95 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms