RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ABCB5Q2M3G0 1257 aa18.5■□□□□ 0.55
PCDHGC3-204ENST00000617222 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
PCDHGC3-204ENST00000617222 ANKRD13AQ8IZ07 590 aa18.5■□□□□ 0.55
PCDHGC3-204ENST00000617222 CCDC17Q96LX7 622 aa18.5■□□□□ 0.55
PCDHGC3-204ENST00000617222 NEDD4P46934 1319 aa18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 E7EWF7 191 aa18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 RANBP6O60518 1105 aaKnown RBP18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 PCP11498 1178 aaKnown RBP18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 ZKSCAN1P17029 563 aaPredicted RBP18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 VGLL4Q14135 290 aa18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 FAM47AQ5JRC9 791 aa18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 STOX1Q6ZVD7 989 aa18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 KCNB2Q92953 911 aa18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 CLMNQ96JQ2 1002 aa18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 CABP5Q9NP86 173 aa18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 ABT1Q9ULW3 272 aaKnown RBP18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 CSADQ9Y600 493 aa18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 SIPA1L1O43166 1804 aa18.49■□□□□ 0.55
PCDHGC3-204ENST00000617222 B4E1Z4 1266 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 GH2P01242 217 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 TFAP4Q01664 338 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 TRDNQ13061 729 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 SAPCD2Q86UD0 394 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 SCYL3Q8IZE3 742 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 NKX2-3Q8TAU0 364 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 SLC10A4Q96EP9 437 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 KRT23Q9C075 422 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 ELP3Q9H9T3 547 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 PICK1Q9NRD5 415 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 SNX14Q9Y5W7 946 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 TLL2Q9Y6L7 1015 aa18.48■□□□□ 0.55
PCDHGC3-204ENST00000617222 C1QTNF8P60827 252 aa18.47■□□□□ 0.55
PCDHGC3-204ENST00000617222 TSGA10IPQ3SY00 556 aa18.47■□□□□ 0.55
PCDHGC3-204ENST00000617222 NOL9Q5SY16 702 aaKnown RBP18.47■□□□□ 0.55
PCDHGC3-204ENST00000617222 ESR2Q92731 530 aa18.47■□□□□ 0.55
PCDHGC3-204ENST00000617222 CNNM2Q9H8M5 875 aa18.47■□□□□ 0.55
PCDHGC3-204ENST00000617222 ZBTB21Q9ULJ3 1066 aa18.47■□□□□ 0.55
PCDHGC3-204ENST00000617222 SNCAIPQ9Y6H5 919 aa18.47■□□□□ 0.55
PCDHGC3-204ENST00000617222 UNCXA6NJT0 531 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 TSPY2A6NKD2 308 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 KDM4AO75164 1064 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 ASNSP08243 561 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 TSPY3P0CV98 308 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 TSPY8P0CW00 308 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 GUCY1A2P33402 732 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 SEPT2Q15019 361 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 RAB3GAP1Q15042 981 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 RALYLQ86SE5 291 aaKnown RBP18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 CCDC84Q86UT8 332 aaPredicted RBP18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 NCOA7Q8NI08 942 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 CREBZFQ9NS37 354 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 GINM1Q9NU53 330 aa18.46■□□□□ 0.55
PCDHGC3-204ENST00000617222 PAPPA2Q9BXP8 1791 aa18.45■□□□□ 0.54
PCDHGC3-204ENST00000617222 PTPRAP18433 802 aa18.45■□□□□ 0.54
PCDHGC3-204ENST00000617222 KRT32Q14532 448 aa18.45■□□□□ 0.54
PCDHGC3-204ENST00000617222 ADCK5Q3MIX3 580 aa18.45■□□□□ 0.54
PCDHGC3-204ENST00000617222 TMEM179Q6ZVK1 233 aa18.45■□□□□ 0.54
PCDHGC3-204ENST00000617222 NEDD1Q8NHV4 660 aa18.45■□□□□ 0.54
PCDHGC3-204ENST00000617222 CNKSR2Q8WXI2 1034 aa18.45■□□□□ 0.54
PCDHGC3-204ENST00000617222 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.45■□□□□ 0.54
PCDHGC3-204ENST00000617222 UPF2Q9HAU5 1272 aaKnown RBP18.45■□□□□ 0.54
PCDHGC3-204ENST00000617222 ZSWIM5Q9P217 1185 aa18.45■□□□□ 0.54
PCDHGC3-204ENST00000617222 ZHX2Q9Y6X8 837 aa18.45■□□□□ 0.54
PCDHGC3-204ENST00000617222 TRPM7Q96QT4 1865 aa18.44■□□□□ 0.54
PCDHGC3-204ENST00000617222 USP17L5A8MUK1 530 aa18.44■□□□□ 0.54
PCDHGC3-204ENST00000617222 ZNF157P51786 506 aaPredicted RBP18.44■□□□□ 0.54
PCDHGC3-204ENST00000617222 CYB5R4Q7L1T6 521 aa18.44■□□□□ 0.54
PCDHGC3-204ENST00000617222 ERO1BQ86YB8 467 aa18.44■□□□□ 0.54
PCDHGC3-204ENST00000617222 NEK1Q96PY6 1258 aa18.44■□□□□ 0.54
PCDHGC3-204ENST00000617222 C22orf23Q9BZE7 217 aa18.44■□□□□ 0.54
PCDHGC3-204ENST00000617222 LAMB1P07942 1786 aa18.43■□□□□ 0.54
PCDHGC3-204ENST00000617222 RGMBQ6NW40 437 aa18.43■□□□□ 0.54
PCDHGC3-204ENST00000617222 CLEC10AQ8IUN9 316 aa18.43■□□□□ 0.54
PCDHGC3-204ENST00000617222 MB21D2Q8IYB1 491 aaPredicted RBP18.43■□□□□ 0.54
PCDHGC3-204ENST00000617222 JAKMIP1Q96N16 626 aaKnown RBP18.43■□□□□ 0.54
PCDHGC3-204ENST00000617222 ZKSCAN3Q9BRR0 538 aa18.43■□□□□ 0.54
PCDHGC3-204ENST00000617222 IL17RBQ9NRM6 502 aa18.43■□□□□ 0.54
PCDHGC3-204ENST00000617222 IGKV6D-41A0A0C4DH26 115 aa18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 SPDYE5A6NIY4 337 aa18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 NMT2O60551 498 aa18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 NT5C2P49902 561 aa18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 HTRA3P83110 453 aa18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 COL9A3Q14050 684 aaPredicted RBP18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 PAXIP1Q6ZW49 1069 aaPredicted RBP18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 CHST3Q7LGC8 479 aa18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 OPTNQ96CV9 577 aa18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 OTUD5Q96G74 571 aa18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 CEP95Q96GE4 821 aa18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 KANSL2Q9H9L4 492 aa18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 TCP11L1Q9NUJ3 509 aa18.42■□□□□ 0.54
PCDHGC3-204ENST00000617222 PSMA5P28066 241 aa18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 GJA5P36382 358 aa18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 ANAPC15P60006 121 aa18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 ATP2B2Q01814 1243 aa18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 ICA1Q05084 483 aa18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 PPATQ06203 517 aa18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 MKRN3Q13064 507 aaKnown RBP18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 DEFB115Q30KQ5 88 aa18.41■□□□□ 0.54
PCDHGC3-204ENST00000617222 IQCA1Q86XH1 822 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms