RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CCDC155Q8N6L0 562 aa15.11■□□□□ 0.01
PPP4R3B-205ENST00000616288 DDX27Q96GQ7 796 aaKnown RBP15.11■□□□□ 0.01
PPP4R3B-205ENST00000616288 SERTAD1Q9UHV2 236 aa15.11■□□□□ 0.01
PPP4R3B-205ENST00000616288 CD2APQ9Y5K6 639 aa15.11■□□□□ 0.01
PPP4R3B-205ENST00000616288 A0A1W2PQ27 194 aa15.11■□□□□ 0.01
PPP4R3B-205ENST00000616288 A0A1W2PQ64 194 aa15.11■□□□□ 0.01
PPP4R3B-205ENST00000616288 A0A1W2PQD8 194 aa15.11■□□□□ 0.01
PPP4R3B-205ENST00000616288 ANKRD13CQ8N6S4 541 aa15.11■□□□□ 0.01
PPP4R3B-205ENST00000616288 C19orf44Q9H6X5 657 aa15.11■□□□□ 0.01
PPP4R3B-205ENST00000616288 TSGA10IPQ3SY00 556 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 MGARPQ8TDB4 240 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 EPB41L5Q9HCM4 733 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 CEP170Q5SW79 1584 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 TNNC1P63316 161 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 FMR1NBQ8N0W7 255 aaPredicted RBP15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 LINC00301Q8NCQ3 95 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 TRIM7Q9C029 511 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 TTC21BQ7Z4L5 1316 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 EVI5O60447 810 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 LAMB3Q13751 1172 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 GRIPAP1Q4V328 841 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 OSBPL9Q96SU4 736 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 PTPRTO14522 1441 aa15.1■□□□□ 0.01
PPP4R3B-205ENST00000616288 ZNF213O14771 459 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 PRC1O43663 620 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 CTNND1O60716 968 aaKnown RBP15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 PPP1R37O75864 691 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 SSRP1Q08945 709 aaKnown RBP15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 INTS8Q75QN2 995 aaKnown RBP15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 FAM114A1Q8IWE2 563 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 OR8K1Q8NGG5 319 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 PSMD1Q99460 953 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 PHAXQ9H814 394 aaKnown RBP15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 VIPAS39Q9H9C1 493 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 SNRKQ9NRH2 765 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 RTEL1Q9NZ71 1219 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 CREB3O43889 395 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 CPP00450 1065 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 KRT14P02533 472 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 SMTNP53814 917 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 WASF1Q92558 559 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 LRRC45Q96CN5 670 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 TRAPPC8Q9Y2L5 1435 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 FOXO3O43524 673 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 LSP1P33241 339 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 OSBPL1AQ9BXW6 950 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 DDX21Q9NR30 783 aaKnown RBP eCLIP15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 SERPINA10Q9UK55 444 aa15.09■□□□□ 0.01
PPP4R3B-205ENST00000616288 RPS6KA5O75582 802 aa15.08■□□□□ 0.01
PPP4R3B-205ENST00000616288 HDLBPQ00341 1268 aaKnown RBP15.08■□□□□ 0.01
PPP4R3B-205ENST00000616288 BEND3Q5T5X7 828 aa15.08■□□□□ 0.01
PPP4R3B-205ENST00000616288 NAA35Q5VZE5 725 aa15.08■□□□□ 0.01
PPP4R3B-205ENST00000616288 LMBR1Q8WVP7 490 aa15.08■□□□□ 0.01
PPP4R3B-205ENST00000616288 NFU1Q9UMS0 254 aa15.08■□□□□ 0.01
PPP4R3B-205ENST00000616288 NPM1P06748 294 aaKnown RBP eCLIP15.08■□□□□ 0
PPP4R3B-205ENST00000616288 SNX1Q13596 522 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 PREPLQ4J6C6 727 aaPredicted RBP15.08■□□□□ 0
PPP4R3B-205ENST00000616288 THEMIS2Q5TEJ8 643 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 ALS2CLQ60I27 953 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 GRAMD1CQ8IYS0 662 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 EEF2KMTQ96G04 330 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 MMS19Q96T76 1030 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 SEPT11Q9NVA2 429 aaKnown RBP15.08■□□□□ 0
PPP4R3B-205ENST00000616288 CHCHD3Q9NX63 227 aaKnown RBP15.08■□□□□ 0
PPP4R3B-205ENST00000616288 ARHGAP5Q13017 1502 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 MYL6BP14649 208 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 C1orf141Q5JVX7 400 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 SOGA3Q5TF21 947 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 ARHGEF25Q86VW2 580 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 KSR1Q8IVT5 923 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 MAP4K1Q92918 833 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 CCDC51Q96ER9 411 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 MYO1AQ9UBC5 1043 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 KIF24Q5T7B8 1368 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 PTCH1Q13635 1447 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 TOPBP1Q92547 1522 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 RBM43Q6ZSC3 357 aaKnown RBP15.08■□□□□ 0
PPP4R3B-205ENST00000616288 ARMC9Q7Z3E5 817 aa15.08■□□□□ 0
PPP4R3B-205ENST00000616288 TBC1D8BQ0IIM8 1120 aa15.07■□□□□ 0
PPP4R3B-205ENST00000616288 SETDB1Q15047 1291 aa15.07■□□□□ 0
PPP4R3B-205ENST00000616288 CFAP221Q4G0U5 840 aa15.07■□□□□ 0
PPP4R3B-205ENST00000616288 NSUN7Q8NE18 718 aaKnown RBP15.07■□□□□ 0
PPP4R3B-205ENST00000616288 ARHGEF2Q92974 986 aaKnown RBP15.07■□□□□ 0
PPP4R3B-205ENST00000616288 EPN3Q9H201 632 aa15.07■□□□□ 0
PPP4R3B-205ENST00000616288 ESYT3A0FGR9 886 aa15.07■□□□□ 0
PPP4R3B-205ENST00000616288 HEXIM1O94992 359 aaKnown RBP15.07■□□□□ 0
PPP4R3B-205ENST00000616288 RBM5P52756 815 aaKnown RBP eCLIP15.07■□□□□ 0
PPP4R3B-205ENST00000616288 PROSER2Q86WR7 435 aaPredicted RBP15.07■□□□□ 0
PPP4R3B-205ENST00000616288 STIM2Q9P246 746 aa15.07■□□□□ 0
PPP4R3B-205ENST00000616288 PTPROQ16827 1216 aa15.07■□□□□ 0
PPP4R3B-205ENST00000616288 KCNV1Q6PIU1 500 aa15.07■□□□□ 0
PPP4R3B-205ENST00000616288 CCDC25Q86WR0 208 aa15.07■□□□□ 0
PPP4R3B-205ENST00000616288 SMYD4Q8IYR2 804 aaPredicted RBP15.07■□□□□ 0
PPP4R3B-205ENST00000616288 UHMK1Q8TAS1 419 aaKnown RBP15.07■□□□□ 0
PPP4R3B-205ENST00000616288 PLB1Q6P1J6 1458 aa15.07■□□□□ 0
PPP4R3B-205ENST00000616288 GSTTP1A0A1W2PQM5 241 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 GMNCA6NCL1 334 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 TEX33O43247 280 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 APBA1Q02410 837 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 NECTIN1Q15223 517 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms