RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 ATP8A2Q9NTI2 1148 aa20.51■□□□□ 0.87
LHX1-202ENST00000616237 ZBTB21Q9ULJ3 1066 aa20.51■□□□□ 0.87
LHX1-202ENST00000616237 TLR2O60603 784 aa20.5■□□□□ 0.87
LHX1-202ENST00000616237 CAPN15O75808 1086 aa20.5■□□□□ 0.87
LHX1-202ENST00000616237 ASNSP08243 561 aa20.5■□□□□ 0.87
LHX1-202ENST00000616237 NUCB1Q02818 461 aa20.5■□□□□ 0.87
LHX1-202ENST00000616237 CHD1LQ86WJ1 897 aa20.5■□□□□ 0.87
LHX1-202ENST00000616237 SLC4A4Q9Y6R1 1079 aa20.5■□□□□ 0.87
LHX1-202ENST00000616237 ADGRA2Q96PE1 1338 aa20.5■□□□□ 0.87
LHX1-202ENST00000616237 CYP2D7A0A087X1C5 515 aa20.49■□□□□ 0.87
LHX1-202ENST00000616237 M0R2C6 588 aa20.49■□□□□ 0.87
LHX1-202ENST00000616237 ZFYP08048 801 aaPredicted RBP20.49■□□□□ 0.87
LHX1-202ENST00000616237 GADL1Q6ZQY3 521 aa20.49■□□□□ 0.87
LHX1-202ENST00000616237 SEC62Q99442 399 aaKnown RBP20.49■□□□□ 0.87
LHX1-202ENST00000616237 WDR18Q9BV38 432 aa20.49■□□□□ 0.87
LHX1-202ENST00000616237 BAZ2AQ9UIF9 1905 aaKnown RBP20.49■□□□□ 0.87
LHX1-202ENST00000616237 GH2P01242 217 aa20.48■□□□□ 0.87
LHX1-202ENST00000616237 CYP2C8P10632 490 aa20.48■□□□□ 0.87
LHX1-202ENST00000616237 SP3Q02447 781 aa20.48■□□□□ 0.87
LHX1-202ENST00000616237 FASTKD5Q7L8L6 764 aaKnown RBP20.48■□□□□ 0.87
LHX1-202ENST00000616237 SLC44A5Q8NCS7 719 aa20.48■□□□□ 0.87
LHX1-202ENST00000616237 CD99L2Q8TCZ2 262 aa20.48■□□□□ 0.87
LHX1-202ENST00000616237 FSD1Q9BTV5 496 aa20.48■□□□□ 0.87
LHX1-202ENST00000616237 TBC1D2Q9BYX2 928 aa20.48■□□□□ 0.87
LHX1-202ENST00000616237 GSG1L2A8MUP6 293 aa20.47■□□□□ 0.87
LHX1-202ENST00000616237 USP17L12C9JPN9 530 aa20.47■□□□□ 0.87
LHX1-202ENST00000616237 USP17L21D6R901 530 aa20.47■□□□□ 0.87
LHX1-202ENST00000616237 GPAA1O43292 621 aa20.47■□□□□ 0.87
LHX1-202ENST00000616237 TREML2Q5T2D2 321 aa20.47■□□□□ 0.87
LHX1-202ENST00000616237 C12orf60Q5U649 245 aa20.47■□□□□ 0.87
LHX1-202ENST00000616237 C17orf99Q6UX52 265 aa20.47■□□□□ 0.87
LHX1-202ENST00000616237 DYNLL2Q96FJ2 89 aa20.47■□□□□ 0.87
LHX1-202ENST00000616237 GINM1Q9NU53 330 aa20.47■□□□□ 0.87
LHX1-202ENST00000616237 GUCY1A2P33402 732 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 HMGCS2P54868 508 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 CERKLQ49MI3 558 aaPredicted RBP20.46■□□□□ 0.87
LHX1-202ENST00000616237 SH3D19Q5HYK7 790 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 CTR9Q6PD62 1173 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 PLEKHM2Q8IWE5 1019 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 AS3MTQ9HBK9 375 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 CPA4Q9UI42 421 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 BACE1P56817 501 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 MTMR2Q13614 643 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 ZMYM1Q5SVZ6 1142 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 OTOP1Q7RTM1 612 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 EVI5LQ96CN4 794 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 ERO1AQ96HE7 468 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 EPB41L4AQ9HCS5 686 aaPredicted RBP20.46■□□□□ 0.87
LHX1-202ENST00000616237 AGTPBP1Q9UPW5 1226 aa20.46■□□□□ 0.87
LHX1-202ENST00000616237 HTTP42858 3142 aa20.45■□□□□ 0.86
LHX1-202ENST00000616237 LOC285556D6RIA3 1793 aa20.45■□□□□ 0.86
LHX1-202ENST00000616237 ABCB5Q2M3G0 1257 aa20.45■□□□□ 0.86
LHX1-202ENST00000616237 PROCA1Q8NCQ7 364 aaPredicted RBP20.45■□□□□ 0.86
LHX1-202ENST00000616237 PARK7Q99497 189 aaKnown RBP20.45■□□□□ 0.86
LHX1-202ENST00000616237 SLC45A1Q9Y2W3 748 aa20.45■□□□□ 0.86
LHX1-202ENST00000616237 TRIM17Q9Y577 477 aa20.45■□□□□ 0.86
LHX1-202ENST00000616237 LRRFIP1Q32MZ4 808 aaKnown RBP20.44■□□□□ 0.86
LHX1-202ENST00000616237 ARHGAP39Q9C0H5 1083 aa20.44■□□□□ 0.86
LHX1-202ENST00000616237 OSBPL3Q9H4L5 887 aa20.44■□□□□ 0.86
LHX1-202ENST00000616237 ZSWIM8A7E2V4 1837 aa20.43■□□□□ 0.86
LHX1-202ENST00000616237 BCRP11274 1271 aa20.43■□□□□ 0.86
LHX1-202ENST00000616237 CTGFP29279 349 aa20.43■□□□□ 0.86
LHX1-202ENST00000616237 PKN2Q16513 984 aaKnown RBP20.43■□□□□ 0.86
LHX1-202ENST00000616237 SWAP70Q9UH65 585 aa20.43■□□□□ 0.86
LHX1-202ENST00000616237 USP17L10C9JJH3 530 aa20.42■□□□□ 0.86
LHX1-202ENST00000616237 PDE4AP27815 886 aa20.42■□□□□ 0.86
LHX1-202ENST00000616237 CDK8P49336 464 aa20.42■□□□□ 0.86
LHX1-202ENST00000616237 LACTBP83111 547 aaPredicted RBP20.42■□□□□ 0.86
LHX1-202ENST00000616237 SEPT2Q15019 361 aa20.42■□□□□ 0.86
LHX1-202ENST00000616237 RAB3GAP1Q15042 981 aa20.42■□□□□ 0.86
LHX1-202ENST00000616237 SBK1Q52WX2 424 aa20.42■□□□□ 0.86
LHX1-202ENST00000616237 GIMAP6Q6P9H5 292 aa20.42■□□□□ 0.86
LHX1-202ENST00000616237 FBXO46Q6PJ61 603 aaPredicted RBP20.42■□□□□ 0.86
LHX1-202ENST00000616237 CCDC129Q6ZRS4 1044 aa20.42■□□□□ 0.86
LHX1-202ENST00000616237 ACER1Q8TDN7 264 aa20.42■□□□□ 0.86
LHX1-202ENST00000616237 EMILIN3Q9NT22 766 aa20.42■□□□□ 0.86
LHX1-202ENST00000616237 HPS5Q9UPZ3 1129 aa20.42■□□□□ 0.86
LHX1-202ENST00000616237 C19orf81C9J6K1 198 aa20.41■□□□□ 0.86
LHX1-202ENST00000616237 FOXP2O15409 715 aa20.41■□□□□ 0.86
LHX1-202ENST00000616237 AKR1B1P15121 316 aa20.41■□□□□ 0.86
LHX1-202ENST00000616237 C16orf86Q6ZW13 317 aa20.41■□□□□ 0.86
LHX1-202ENST00000616237 DDRGK1Q96HY6 314 aa20.41■□□□□ 0.86
LHX1-202ENST00000616237 EFCC1Q9HA90 598 aa20.41■□□□□ 0.86
LHX1-202ENST00000616237 CABP5Q9NP86 173 aa20.41■□□□□ 0.86
LHX1-202ENST00000616237 ARPP21Q9UBL0 812 aaPredicted RBP20.41■□□□□ 0.86
LHX1-202ENST00000616237 TAOK2Q9UL54 1235 aa20.41■□□□□ 0.86
LHX1-202ENST00000616237 CCDC85CA6NKD9 419 aa20.4■□□□□ 0.86
LHX1-202ENST00000616237 PATL2C9JE40 543 aaKnown RBP20.4■□□□□ 0.86
LHX1-202ENST00000616237 ECM2O94769 699 aaPredicted RBP20.4■□□□□ 0.86
LHX1-202ENST00000616237 GNAT2P19087 354 aa20.4■□□□□ 0.86
LHX1-202ENST00000616237 IFNL3Q8IZI9 196 aa20.4■□□□□ 0.86
LHX1-202ENST00000616237 A0A1W2PRG0 241 aa20.39■□□□□ 0.85
LHX1-202ENST00000616237 MPHOSPH10O00566 681 aaKnown RBP20.39■□□□□ 0.85
LHX1-202ENST00000616237 AMOTL1Q8IY63 956 aa20.39■□□□□ 0.85
LHX1-202ENST00000616237 FAM227BQ96M60 508 aa20.39■□□□□ 0.85
LHX1-202ENST00000616237 ASCC2Q9H1I8 757 aaPredicted RBP20.39■□□□□ 0.85
LHX1-202ENST00000616237 TMOD4Q9NZQ9 345 aa20.39■□□□□ 0.85
LHX1-202ENST00000616237 PTPN22Q9Y2R2 807 aa20.39■□□□□ 0.85
LHX1-202ENST00000616237 A0A0D9SFI3 127 aa20.38■□□□□ 0.85
LHX1-202ENST00000616237 MINDY4BA8MYZ0 360 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms