RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	IFT57	Q9NWB7	429 aa		11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SLC30A1	Q9Y6M5	507 aa		11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	ZNF831	Q5JPB2	1677 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	UBR3	Q6ZT12	1888 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	LAMB4	A4D0S4	1761 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	LOC102724428	A0A0B4J2F2	783 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	PRAMEF22	A3QJZ6	481 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	GTPBP10	A4D1E9	387 aa	Known RBP	11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SPDYE4	A6NLX3	237 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	C19orf81	C9J6K1	198 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	ERLIN1	O75477	346 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	RECK	O95980	971 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	VAMP1	P23763	118 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	MSN	P26038	577 aa	Known RBP	11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TPP2	P29144	1249 aa	Predicted RBP	11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SIK1	P57059	783 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	MUM1L1	Q5H9M0	696 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	PEX5L	Q8IYB4	626 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	KRI1	Q8N9T8	703 aa	Known RBP	11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	C8orf48	Q96LL4	319 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TBK1	Q9UHD2	729 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TSPYL4	Q9UJ04	414 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	RRP15	Q9Y3B9	282 aa	Known RBP	11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	ZNF521	Q96K83	1311 aa		11.01	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SMC2	O95347	1197 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	RAPGEF1	Q13905	1077 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	KRT24	Q2M2I5	525 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CPLX2	Q6PUV4	134 aa	Known RBP	11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TMEM110	Q86TL2	294 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TTC5	Q8N0Z6	440 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	USP33	Q8TEY7	942 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TSR2	Q969E8	191 aa	Known RBP	11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TBC1D20	Q96BZ9	403 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	MBIP	Q9NS73	344 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CCNL1	Q9UK58	526 aa	Predicted RBP	11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	COG6	Q9Y2V7	657 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	RABGAP1	Q9Y3P9	1069 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	C4B	P0C0L5	1744 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	ITPK1	Q13572	414 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	MYBPC3	Q14896	1274 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TOMM20	Q15388	145 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TSGA10IP	Q3SY00	556 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	C10orf62	Q5T681	223 aa	Predicted RBP	11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	FAM76A	Q8TAV0	307 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	DDX12P	Q92771	950 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	KCNN1	Q92952	543 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	DHTKD1	Q96HY7	919 aa	Predicted RBP	11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SCLT1	Q96NL6	688 aa		11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	LRRFIP2	Q9Y608	721 aa	Known RBP	11	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CIC	Q96RK0	1608 aa	Predicted RBP	10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940		H0Y3Z8	333 aa		10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SNUPN	O95149	360 aa	Known RBP	10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TRAPPC10	P48553	1259 aa		10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	NASP	P49321	788 aa	Predicted RBP	10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	GOLGA2	Q08379	1002 aa		10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CCSAP	Q6IQ19	270 aa	Predicted RBP	10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	PDCL2	Q8N4E4	241 aa		10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CDCA7L	Q96GN5	454 aa		10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SH3GL1	Q99961	368 aa		10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TCHP	Q9BT92	498 aa		10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CAPS2	Q9BXY5	557 aa		10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	ABCG4	Q9H172	646 aa		10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.99	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TBX3	O15119	743 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	DNAJC10	Q8IXB1	793 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	UROC1	Q96N76	676 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SPAG5	Q96R06	1193 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	LRRCC1	Q9C099	1032 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	ZNF304	Q9HCX3	659 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	EVL	Q9UI08	416 aa	Predicted RBP	10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TTF2	Q9UNY4	1162 aa	Known RBP	10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CACNA1F	O60840	1977 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	HEG1	Q9ULI3	1381 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CCDC163	A0A0D9SF12	145 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	EIF4A1	P60842	406 aa	Known RBP	10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	GNAI1	P63096	354 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	GRIK3	Q13003	919 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	NEK10	Q6ZWH5	1172 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SMIM5	Q71RC9	77 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	WDR63	Q8IWG1	891 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	LINC00116	Q8NCU8	138 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	MYRIP	Q8NFW9	859 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	WDR66	Q8TBY9	1149 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	VPS33B	Q9H267	617 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SENP2	Q9HC62	589 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	LMCD1	Q9NZU5	365 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SQOR	Q9Y6N5	450 aa		10.98	□□□□□ -0.65
LRTOMT-222	ENST00000615940	GRXCR2	A6NFK2	248 aa		10.97	□□□□□ -0.65
LRTOMT-222	ENST00000615940	FRAT2	O75474	233 aa	Predicted RBP	10.97	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CSE1L	P55060	971 aa	Known RBP	10.97	□□□□□ -0.65
LRTOMT-222	ENST00000615940	RABEP1	Q15276	862 aa		10.97	□□□□□ -0.65
LRTOMT-222	ENST00000615940	SYCP2L	Q5T4T6	812 aa		10.97	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CCDC144CP	Q8IYA2	1237 aa		10.97	□□□□□ -0.65
LRTOMT-222	ENST00000615940	KRT222	Q8N1A0	295 aa		10.97	□□□□□ -0.65
LRTOMT-222	ENST00000615940	RNF214	Q8ND24	703 aa		10.97	□□□□□ -0.65
LRTOMT-222	ENST00000615940	ANKK1	Q8NFD2	765 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms