RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 BIN2Q9UBW5 565 aaPredicted RBP12.88□□□□□ -0.35
COL4A1-205ENST00000615732 AKAP2Q9Y2D5 859 aa12.88□□□□□ -0.35
COL4A1-205ENST00000615732 UBXN2AP68543 259 aa12.87□□□□□ -0.35
COL4A1-205ENST00000615732 SPTY2D1Q68D10 685 aaPredicted RBP12.87□□□□□ -0.35
COL4A1-205ENST00000615732 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
COL4A1-205ENST00000615732 U2AF1L4Q8WU68 220 aaKnown RBP12.87□□□□□ -0.35
COL4A1-205ENST00000615732 RUFY2Q8WXA3 655 aa12.87□□□□□ -0.35
COL4A1-205ENST00000615732 EVI5LQ96CN4 794 aa12.87□□□□□ -0.35
COL4A1-205ENST00000615732 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
COL4A1-205ENST00000615732 GPR108Q9NPR9 543 aa12.87□□□□□ -0.35
COL4A1-205ENST00000615732 RAI14Q9P0K7 980 aa12.87□□□□□ -0.35
COL4A1-205ENST00000615732 AFG3L2Q9Y4W6 797 aa12.87□□□□□ -0.35
COL4A1-205ENST00000615732 GPR75-ASB3A0A0A6YYF3 556 aa12.86□□□□□ -0.35
COL4A1-205ENST00000615732 HIP1O00291 1037 aa12.86□□□□□ -0.35
COL4A1-205ENST00000615732 FARP2O94887 1054 aaPredicted RBP12.86□□□□□ -0.35
COL4A1-205ENST00000615732 MCAMP43121 646 aa12.86□□□□□ -0.35
COL4A1-205ENST00000615732 TREML2Q5T2D2 321 aa12.86□□□□□ -0.35
COL4A1-205ENST00000615732 SPATA5Q8NB90 893 aa12.86□□□□□ -0.35
COL4A1-205ENST00000615732 SMCR8Q8TEV9 937 aaPredicted RBP12.86□□□□□ -0.35
COL4A1-205ENST00000615732 NSUN4Q96CB9 384 aaKnown RBP12.86□□□□□ -0.35
COL4A1-205ENST00000615732 FAM163AQ96GL9 167 aaPredicted RBP12.86□□□□□ -0.35
COL4A1-205ENST00000615732 USP26Q9BXU7 913 aa12.86□□□□□ -0.35
COL4A1-205ENST00000615732 ANO2Q9NQ90 1003 aa12.86□□□□□ -0.35
COL4A1-205ENST00000615732 SNRKQ9NRH2 765 aa12.86□□□□□ -0.35
COL4A1-205ENST00000615732 TLR7Q9NYK1 1049 aaKnown RBP12.86□□□□□ -0.35
COL4A1-205ENST00000615732 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
COL4A1-205ENST00000615732 ZBTB22O15209 634 aa12.85□□□□□ -0.35
COL4A1-205ENST00000615732 ADCY3O60266 1144 aa12.85□□□□□ -0.35
COL4A1-205ENST00000615732 CTNND1O60716 968 aaKnown RBP12.85□□□□□ -0.35
COL4A1-205ENST00000615732 INHAP05111 366 aa12.85□□□□□ -0.35
COL4A1-205ENST00000615732 ELNP15502 786 aa12.85□□□□□ -0.35
COL4A1-205ENST00000615732 ARID4AP29374 1257 aaPredicted RBP12.85□□□□□ -0.35
COL4A1-205ENST00000615732 FLT3LGP49771 235 aa12.85□□□□□ -0.35
COL4A1-205ENST00000615732 RABEP1Q15276 862 aa12.85□□□□□ -0.35
COL4A1-205ENST00000615732 FASTKD5Q7L8L6 764 aaKnown RBP12.85□□□□□ -0.35
COL4A1-205ENST00000615732 TEX11Q8IYF3 940 aa12.85□□□□□ -0.35
COL4A1-205ENST00000615732 TBC1D2Q9BYX2 928 aa12.85□□□□□ -0.35
COL4A1-205ENST00000615732 BOLA2Q9H3K6 86 aa12.85□□□□□ -0.35
COL4A1-205ENST00000615732 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.85□□□□□ -0.35
COL4A1-205ENST00000615732 DBNLQ9UJU6 430 aaKnown RBP12.85□□□□□ -0.35
COL4A1-205ENST00000615732 LOC285556D6RIA3 1793 aa12.84□□□□□ -0.35
COL4A1-205ENST00000615732 ALPK3Q96L96 1907 aa12.84□□□□□ -0.35
COL4A1-205ENST00000615732 SGPL1O95470 568 aa12.84□□□□□ -0.35
COL4A1-205ENST00000615732 GSTO1P78417 241 aa12.84□□□□□ -0.35
COL4A1-205ENST00000615732 MAP3K10Q02779 954 aa12.84□□□□□ -0.35
COL4A1-205ENST00000615732 RRP1BQ14684 758 aaKnown RBP12.84□□□□□ -0.35
COL4A1-205ENST00000615732 KIAA1211Q6ZU35 1233 aa12.84□□□□□ -0.35
COL4A1-205ENST00000615732 ANKRD13CQ8N6S4 541 aa12.84□□□□□ -0.35
COL4A1-205ENST00000615732 SH3RF3Q8TEJ3 882 aaPredicted RBP12.84□□□□□ -0.35
COL4A1-205ENST00000615732 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
COL4A1-205ENST00000615732 FSD1Q9BTV5 496 aa12.84□□□□□ -0.35
COL4A1-205ENST00000615732 OSBPL5Q9H0X9 879 aaPredicted RBP12.84□□□□□ -0.35
COL4A1-205ENST00000615732 AGTPBP1Q9UPW5 1226 aa12.84□□□□□ -0.35
COL4A1-205ENST00000615732 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
COL4A1-205ENST00000615732 COL6A3P12111 3177 aa12.83□□□□□ -0.35
COL4A1-205ENST00000615732 TNPO2O14787 897 aaKnown RBP12.83□□□□□ -0.36
COL4A1-205ENST00000615732 ATP5JP18859 108 aa12.83□□□□□ -0.36
COL4A1-205ENST00000615732 IRF5Q13568 498 aa12.83□□□□□ -0.36
COL4A1-205ENST00000615732 PXYLP1Q8TE99 480 aa12.83□□□□□ -0.36
COL4A1-205ENST00000615732 SNX21Q969T3 373 aa12.83□□□□□ -0.36
COL4A1-205ENST00000615732 AATFQ9NY61 560 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL4A1-205ENST00000615732 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.36
COL4A1-205ENST00000615732 NR2E3Q9Y5X4 410 aa12.83□□□□□ -0.36
COL4A1-205ENST00000615732 MAST2Q6P0Q8 1798 aa12.82□□□□□ -0.36
COL4A1-205ENST00000615732 EPB41L2O43491 1005 aaKnown RBP12.82□□□□□ -0.36
COL4A1-205ENST00000615732 HMGCS2P54868 508 aa12.82□□□□□ -0.36
COL4A1-205ENST00000615732 SPP2Q13103 211 aa12.82□□□□□ -0.36
COL4A1-205ENST00000615732 SHROOM1Q2M3G4 852 aaPredicted RBP12.82□□□□□ -0.36
COL4A1-205ENST00000615732 TTC39AQ5SRH9 613 aa12.82□□□□□ -0.36
COL4A1-205ENST00000615732 CWC27Q6UX04 472 aaKnown RBP12.82□□□□□ -0.36
COL4A1-205ENST00000615732 ADGRA1Q86SQ6 560 aa12.82□□□□□ -0.36
COL4A1-205ENST00000615732 DEFB118Q96PH6 123 aa12.82□□□□□ -0.36
COL4A1-205ENST00000615732 DNAJC2Q99543 621 aaKnown RBP12.82□□□□□ -0.36
COL4A1-205ENST00000615732 PAK6Q9NQU5 681 aaPredicted RBP12.82□□□□□ -0.36
COL4A1-205ENST00000615732 ATAD5Q96QE3 1844 aa12.82□□□□□ -0.36
COL4A1-205ENST00000615732 RAD50Q92878 1312 aa12.82□□□□□ -0.36
COL4A1-205ENST00000615732 COL2A1P02458 1487 aaPredicted RBP12.81□□□□□ -0.36
COL4A1-205ENST00000615732 SOX1O00570 391 aaPredicted RBP12.81□□□□□ -0.36
COL4A1-205ENST00000615732 SGSM2O43147 1006 aa12.81□□□□□ -0.36
COL4A1-205ENST00000615732 TBC1D12O60347 775 aa12.81□□□□□ -0.36
COL4A1-205ENST00000615732 LDHCP07864 332 aa12.81□□□□□ -0.36
COL4A1-205ENST00000615732 UQCRFS1P1P0C7P4 283 aa12.81□□□□□ -0.36
COL4A1-205ENST00000615732 NAA16Q6N069 864 aaPredicted RBP12.81□□□□□ -0.36
COL4A1-205ENST00000615732 MAPKAPK5Q8IW41 473 aa12.81□□□□□ -0.36
COL4A1-205ENST00000615732 DIS3LQ8TF46 1054 aaKnown RBP12.81□□□□□ -0.36
COL4A1-205ENST00000615732 ANP32EQ9BTT0 268 aa12.81□□□□□ -0.36
COL4A1-205ENST00000615732 DNAJC18Q9H819 358 aa12.81□□□□□ -0.36
COL4A1-205ENST00000615732 FLT1P17948 1338 aa12.81□□□□□ -0.36
COL4A1-205ENST00000615732 ST18O60284 1047 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 EVI5O60447 810 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 PEX10O60683 326 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
COL4A1-205ENST00000615732 TFRCP02786 760 aaKnown RBP12.8□□□□□ -0.36
COL4A1-205ENST00000615732 CAP2P40123 477 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 MTMR2Q13614 643 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 CCDC158Q5M9N0 1113 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 ZNF280CQ8ND82 737 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 KIF2CQ99661 725 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 HAUS7Q99871 368 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms