RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 ZNF827Q17R98 1081 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 LRRN4CLQ8ND94 238 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 TSPYL1Q9H0U9 437 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 PARP3Q9Y6F1 533 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 TNS1Q9HBL0 1735 aaKnown RBP12.82□□□□□ -0.36
ATF3-211ENST00000613954 ZMYM6O95789 1325 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 ERICH4A6NGS2 130 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 STX10O60499 249 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 WDHD1O75717 1129 aaPredicted RBP12.82□□□□□ -0.36
ATF3-211ENST00000613954 FGAP02671 866 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 CASQ1P31415 396 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 TRDNQ13061 729 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 GPS2Q13227 327 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 GRAPQ13588 217 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 CAVIN4Q5BKX8 364 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 JAKMIP3Q5VZ66 844 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 RESP18Q5W5W9 173 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 POTEAQ6S8J7 498 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 TXLNBQ8N3L3 684 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 FLAD1Q8NFF5 587 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 GRAPLQ8TC17 118 aaPredicted RBP12.82□□□□□ -0.36
ATF3-211ENST00000613954 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.82□□□□□ -0.36
ATF3-211ENST00000613954 ST7Q9NRC1 585 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.82□□□□□ -0.36
ATF3-211ENST00000613954 DACH1Q9UI36 760 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 PPP2R2CQ9Y2T4 447 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 RGPD3A6NKT7 1758 aaPredicted RBP12.82□□□□□ -0.36
ATF3-211ENST00000613954 RGPD4Q7Z3J3 1758 aa12.82□□□□□ -0.36
ATF3-211ENST00000613954 ZNF213O14771 459 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 CUTAO60888 179 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 PDE6AP16499 860 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 MAP3K12Q12852 859 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
ATF3-211ENST00000613954 CARD6Q9BX69 1037 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 PUS7LQ9H0K6 701 aaKnown RBP12.81□□□□□ -0.36
ATF3-211ENST00000613954 DOCK2Q92608 1830 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 VWA3AA6NCI4 1184 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
ATF3-211ENST00000613954 MARCKSP29966 332 aaPredicted RBP12.81□□□□□ -0.36
ATF3-211ENST00000613954 MAP3K9P80192 1104 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 DDR1Q08345 913 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 CRY2Q49AN0 593 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 VPS37DQ86XT2 251 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 RPGRQ92834 1020 aaKnown RBP12.81□□□□□ -0.36
ATF3-211ENST00000613954 BAG1Q99933 345 aaPredicted RBP12.81□□□□□ -0.36
ATF3-211ENST00000613954 ALG1Q9BT22 464 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 UBXN6Q9BZV1 441 aa12.81□□□□□ -0.36
ATF3-211ENST00000613954 GPHNQ9NQX3 736 aaPredicted RBP12.81□□□□□ -0.36
ATF3-211ENST00000613954 ZNF532Q9HCE3 1301 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 TCRBV5S4A2TA0A5A2 114 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 GPAA1O43292 621 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 CDK11BP21127 795 aaKnown RBP12.8□□□□□ -0.36
ATF3-211ENST00000613954 GYG1P46976 350 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 ANTXR2P58335 489 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 HAND2P61296 217 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 TRIM29Q14134 588 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 PTPAQ15257 358 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 SHC4Q6S5L8 630 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 KRBA2Q6ZNG9 492 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 NLGN1Q8N2Q7 840 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 CNNM3Q8NE01 707 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 FBXO41Q8TF61 875 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 DPF2Q92785 391 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 WWC3Q9ULE0 1092 aa12.8□□□□□ -0.36
ATF3-211ENST00000613954 ANGEL1Q9UNK9 670 aaKnown RBP12.8□□□□□ -0.36
ATF3-211ENST00000613954 METAP2P50579 478 aaKnown RBP eCLIP12.79□□□□□ -0.36
ATF3-211ENST00000613954 SLC20A2Q08357 652 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 TBX2Q13207 712 aaPredicted RBP12.79□□□□□ -0.36
ATF3-211ENST00000613954 PNOCQ13519 176 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 KRT40Q6A162 431 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 ISM2Q6H9L7 571 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 FBXO33Q7Z6M2 555 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
ATF3-211ENST00000613954 TMEM139Q8IV31 216 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 RABGGTAQ92696 567 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 FAM84BQ96KN1 310 aaPredicted RBP12.79□□□□□ -0.36
ATF3-211ENST00000613954 MRFAP1Q9Y605 127 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 EP400Q96L91 3159 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 WTIPA6NIX2 430 aaPredicted RBP12.79□□□□□ -0.36
ATF3-211ENST00000613954 TULP2O00295 520 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 SEMA3EO15041 775 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 FOXP2O15409 715 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 TUBB4BP68371 445 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 CC2D1AQ6P1N0 951 aaPredicted RBP12.79□□□□□ -0.36
ATF3-211ENST00000613954 RBM17Q96I25 401 aaKnown RBP12.79□□□□□ -0.36
ATF3-211ENST00000613954 MAP3K14Q99558 947 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 ARFGAP3Q9NP61 516 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 FANCLQ9NW38 375 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 KCNH3Q9ULD8 1083 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 DENND2AQ9ULE3 1009 aa12.79□□□□□ -0.36
ATF3-211ENST00000613954 MYO5AQ9Y4I1 1855 aaKnown RBP12.78□□□□□ -0.36
ATF3-211ENST00000613954 GNG11P61952 73 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 PPP2R3AQ06190 1150 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 SPECC1LQ69YQ0 1117 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 RSRC2Q7L4I2 434 aaKnown RBP12.78□□□□□ -0.36
ATF3-211ENST00000613954 METTL16Q86W50 562 aaKnown RBP12.78□□□□□ -0.36
ATF3-211ENST00000613954 MAGEB6Q8N7X4 407 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 PDS5AQ29RF7 1337 aaKnown RBP12.78□□□□□ -0.36
ATF3-211ENST00000613954 KLRG2A4D1S0 409 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms