RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 FSD1Q9BTV5 496 aa15.27■□□□□ 0.04
CSTF1-208ENST00000613138 TRIM34Q9BYJ4 488 aa15.27■□□□□ 0.04
CSTF1-208ENST00000613138 ARHGAP39Q9C0H5 1083 aa15.27■□□□□ 0.04
CSTF1-208ENST00000613138 ZBTB47Q9UFB7 747 aaPredicted RBP15.27■□□□□ 0.04
CSTF1-208ENST00000613138 STAP2Q9UGK3 403 aa15.27■□□□□ 0.04
CSTF1-208ENST00000613138 ZBTB21Q9ULJ3 1066 aa15.27■□□□□ 0.04
CSTF1-208ENST00000613138 CXCL11O14625 94 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 ERC2O15083 957 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 GH2P01242 217 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 PDE4AP27815 886 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 HMGCS2P54868 508 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 GABPAQ06546 454 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 AAMPQ13685 434 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 OTUD7BQ6GQQ9 843 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 CLEC10AQ8IUN9 316 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 APPBP2Q92624 585 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 EPB41L4AQ9HCS5 686 aaPredicted RBP15.26■□□□□ 0.03
CSTF1-208ENST00000613138 CPA4Q9UI42 421 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 SERPINB13Q9UIV8 391 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 MGAMO43451 1857 aa15.26■□□□□ 0.03
CSTF1-208ENST00000613138 CENPFP49454 3210 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 ADGRA2Q96PE1 1338 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 USP17L5A8MUK1 530 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 GSG1L2A8MUP6 293 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 USP17L12C9JPN9 530 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 USP17L21D6R901 530 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 GPAA1O43292 621 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 PEX10O60683 326 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 CTGFP29279 349 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 GUCY1A2P33402 732 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 ZSCAN25Q6NSZ9 544 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 TATDN1Q6P1N9 297 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 TMED8Q6PL24 325 aaPredicted RBP15.25■□□□□ 0.03
CSTF1-208ENST00000613138 CTU1Q7Z7A3 348 aaKnown RBP15.25■□□□□ 0.03
CSTF1-208ENST00000613138 ANKRD23Q86SG2 305 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 CERS3Q8IU89 383 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 ZFYVE28Q9HCC9 887 aa15.25■□□□□ 0.03
CSTF1-208ENST00000613138 MTMR2Q13614 643 aa15.24■□□□□ 0.03
CSTF1-208ENST00000613138 ZYXQ15942 572 aaKnown RBP15.24■□□□□ 0.03
CSTF1-208ENST00000613138 CTR9Q6PD62 1173 aa15.24■□□□□ 0.03
CSTF1-208ENST00000613138 TTC6Q86TZ1 520 aa15.24■□□□□ 0.03
CSTF1-208ENST00000613138 SKAP1Q86WV1 359 aa15.24■□□□□ 0.03
CSTF1-208ENST00000613138 ZNF280CQ8ND82 737 aa15.24■□□□□ 0.03
CSTF1-208ENST00000613138 ACER1Q8TDN7 264 aa15.24■□□□□ 0.03
CSTF1-208ENST00000613138 EHD4Q9H223 541 aa15.24■□□□□ 0.03
CSTF1-208ENST00000613138 FOXP2O15409 715 aa15.23■□□□□ 0.03
CSTF1-208ENST00000613138 RAB3GAP1Q15042 981 aa15.23■□□□□ 0.03
CSTF1-208ENST00000613138 CERKLQ49MI3 558 aaPredicted RBP15.23■□□□□ 0.03
CSTF1-208ENST00000613138 ZMYM1Q5SVZ6 1142 aa15.23■□□□□ 0.03
CSTF1-208ENST00000613138 C12orf60Q5U649 245 aa15.23■□□□□ 0.03
CSTF1-208ENST00000613138 FAM227BQ96M60 508 aa15.23■□□□□ 0.03
CSTF1-208ENST00000613138 A0A0D9SFI3 127 aa15.22■□□□□ 0.03
CSTF1-208ENST00000613138 TLR2O60603 784 aa15.22■□□□□ 0.03
CSTF1-208ENST00000613138 AKR1B1P15121 316 aa15.22■□□□□ 0.03
CSTF1-208ENST00000613138 SP3Q02447 781 aa15.22■□□□□ 0.03
CSTF1-208ENST00000613138 SEPT2Q15019 361 aa15.22■□□□□ 0.03
CSTF1-208ENST00000613138 ABCB5Q2M3G0 1257 aa15.22■□□□□ 0.03
CSTF1-208ENST00000613138 NOM1Q5C9Z4 860 aaKnown RBP15.22■□□□□ 0.03
CSTF1-208ENST00000613138 OTOP1Q7RTM1 612 aa15.22■□□□□ 0.03
CSTF1-208ENST00000613138 ATP8A2Q9NTI2 1148 aa15.22■□□□□ 0.03
CSTF1-208ENST00000613138 TRIM17Q9Y577 477 aa15.22■□□□□ 0.03
CSTF1-208ENST00000613138 CCDC85CA6NKD9 419 aa15.21■□□□□ 0.03
CSTF1-208ENST00000613138 TRIM6-TRIM34B2RNG4 842 aa15.21■□□□□ 0.03
CSTF1-208ENST00000613138 MPHOSPH10O00566 681 aaKnown RBP15.21■□□□□ 0.03
CSTF1-208ENST00000613138 ASNSP08243 561 aa15.21■□□□□ 0.03
CSTF1-208ENST00000613138 CDK8P49336 464 aa15.21■□□□□ 0.03
CSTF1-208ENST00000613138 VPS53Q5VIR6 699 aa15.21■□□□□ 0.03
CSTF1-208ENST00000613138 C17orf99Q6UX52 265 aa15.21■□□□□ 0.03
CSTF1-208ENST00000613138 RILPL2Q969X0 211 aa15.21■□□□□ 0.03
CSTF1-208ENST00000613138 WDR18Q9BV38 432 aa15.21■□□□□ 0.03
CSTF1-208ENST00000613138 GREB1LQ9C091 1923 aaPredicted RBP15.21■□□□□ 0.02
CSTF1-208ENST00000613138 MINDY4BA8MYZ0 360 aa15.2■□□□□ 0.02
CSTF1-208ENST00000613138 ZFYP08048 801 aaPredicted RBP15.2■□□□□ 0.02
CSTF1-208ENST00000613138 BACE1P56817 501 aa15.2■□□□□ 0.02
CSTF1-208ENST00000613138 NMIQ13287 307 aaPredicted RBP15.2■□□□□ 0.02
CSTF1-208ENST00000613138 KIAA1755Q5JYT7 1200 aa15.2■□□□□ 0.02
CSTF1-208ENST00000613138 FASTKD5Q7L8L6 764 aaKnown RBP15.2■□□□□ 0.02
CSTF1-208ENST00000613138 EVI5LQ96CN4 794 aa15.2■□□□□ 0.02
CSTF1-208ENST00000613138 EMILIN3Q9NT22 766 aa15.2■□□□□ 0.02
CSTF1-208ENST00000613138 AGTPBP1Q9UPW5 1226 aa15.2■□□□□ 0.02
CSTF1-208ENST00000613138 TACC3Q9Y6A5 838 aa15.2■□□□□ 0.02
CSTF1-208ENST00000613138 MYH4Q9Y623 1939 aa15.19■□□□□ 0.02
CSTF1-208ENST00000613138 A0A1W2PRG0 241 aa15.19■□□□□ 0.02
CSTF1-208ENST00000613138 APPP05067 770 aa15.19■□□□□ 0.02
CSTF1-208ENST00000613138 SH3D19Q5HYK7 790 aa15.19■□□□□ 0.02
CSTF1-208ENST00000613138 C16orf86Q6ZW13 317 aa15.19■□□□□ 0.02
CSTF1-208ENST00000613138 ZNF589Q86UQ0 364 aaPredicted RBP15.19■□□□□ 0.02
CSTF1-208ENST00000613138 IFNL3Q8IZI9 196 aa15.19■□□□□ 0.02
CSTF1-208ENST00000613138 AS3MTQ9HBK9 375 aa15.19■□□□□ 0.02
CSTF1-208ENST00000613138 ZCCHC17Q9NP64 241 aaKnown RBP15.19■□□□□ 0.02
CSTF1-208ENST00000613138 INCENPQ9NQS7 918 aa15.19■□□□□ 0.02
CSTF1-208ENST00000613138 HPS5Q9UPZ3 1129 aa15.19■□□□□ 0.02
CSTF1-208ENST00000613138 RLFQ13129 1914 aa15.18■□□□□ 0.02
CSTF1-208ENST00000613138 USP17L10C9JJH3 530 aa15.18■□□□□ 0.02
CSTF1-208ENST00000613138 PRDM1O75626 825 aa15.18■□□□□ 0.02
CSTF1-208ENST00000613138 BCRP11274 1271 aa15.18■□□□□ 0.02
CSTF1-208ENST00000613138 GSPT1P15170 499 aaKnown RBP15.18■□□□□ 0.02
CSTF1-208ENST00000613138 TDO2P48775 406 aa15.18■□□□□ 0.02
CSTF1-208ENST00000613138 LACTBP83111 547 aaPredicted RBP15.18■□□□□ 0.02
CSTF1-208ENST00000613138 POTEEQ6S8J3 1075 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms