RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 LMNB1P20700 586 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 FANCCQ00597 558 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 EPN3Q9H201 632 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 C9orf78Q9NZ63 289 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 HMG20BQ9P0W2 317 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 TNNQ9UQP3 1299 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 BLMP54132 1417 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 TUBA1BP68363 451 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 PDE1BQ01064 536 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 SCRN1Q12765 414 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 TUBA1AQ71U36 451 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 OPTNQ96CV9 577 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 HAUS8Q9BT25 410 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 TRAIPQ9BWF2 469 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 PLVAPQ9BX97 442 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 UBTFL1P0CB47 393 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 LMOD1P29536 600 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 LMNB2Q03252 620 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 FBXW10Q5XX13 1052 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 DENND2CQ68D51 928 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 PPP1R14CQ8TAE6 165 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 UBAC1Q9BSL1 405 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 ZGPATQ8N5A5 531 aaKnown RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 C8orf76Q96K31 380 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 KPNB1Q14974 876 aaKnown RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 PREPLQ4J6C6 727 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 PACS2Q86VP3 889 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 AKAP2Q9Y2D5 859 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 LIN7AO14910 233 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 FAM186BQ8IYM0 893 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 SURF6O75683 361 aaKnown RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 EIF2S1P05198 315 aaKnown RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 CTCFP49711 727 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 LRMPQ12912 555 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 TSG101Q99816 390 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 ABCC1P33527 1531 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 ARHGEF9O43307 516 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 IMPDH2P12268 514 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 PPP1R14BQ96C90 147 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 HDAC9Q9UKV0 1011 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 SMIM23A6NLE4 172 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 AP1G2O75843 785 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 VPS53Q5VIR6 699 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 FSD1Q9BTV5 496 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 SYNCQ9H7C4 482 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 ABCB6Q9NP58 842 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 GMNCA6NCL1 334 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 RGS16O15492 202 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 IGSF22Q8N9C0 903 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 MAIP1Q8WWC4 291 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 EIF3HO15372 352 aaKnown RBP eCLIP5.48□□□□□ -1.536e-7■■■■■ 28
VPS13D-213ENST00000613099 TRIM11Q96F44 468 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 BMP2KQ9NSY1 1161 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 FMN2Q9NZ56 1722 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 ADCY10Q96PN6 1610 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 NNTQ13423 1086 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 BBOF1Q8ND07 529 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 ARHGAP45Q92619 1136 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 THOC1Q96FV9 657 aaKnown RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 COQ7Q99807 217 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 CCDC169A6NNP5 214 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 KDM1AO60341 852 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 NDC80O14777 642 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 MCF2LO15068 1137 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 MAGEA8P43361 318 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 NDUFA5Q16718 116 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 HNRNPLLQ8WVV9 542 aaKnown RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 ABCC11Q96J66 1382 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 MYH13Q9UKX3 1938 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 GNAT1P11488 350 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 ATP1A2P50993 1020 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 RPS6KA3P51812 740 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 GJC2Q5T442 439 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-213ENST00000613099 MAGEC3Q8TD91 643 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 NRBF2Q96F24 287 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 PREX2Q70Z35 1606 aa5.48□□□□□ -1.53
VPS13D-213ENST00000613099 FAM133BQ5BKY9 247 aaKnown RBP5.47□□□□□ -1.53
VPS13D-213ENST00000613099 ZFYVE27Q5T4F4 411 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 SESTD1Q86VW0 696 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 KLHL29Q96CT2 875 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 GLRX3O76003 335 aaKnown RBP5.47□□□□□ -1.53
VPS13D-213ENST00000613099 BMP15O95972 392 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 MTA1Q13330 715 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 KRT71Q3SY84 523 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 MCM8Q9UJA3 840 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS13D-213ENST00000613099 SSH1Q8WYL5 1049 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 FAM81BQ96LP2 452 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 ZNF518AQ6AHZ1 1483 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 GOLGA8AA7E2F4 631 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 GOLGA8BA8MQT2 603 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 HOXC6P09630 235 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 GPTP24298 496 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 TEKT4Q8WW24 435 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 RIOK1Q9BRS2 568 aaKnown RBP5.47□□□□□ -1.53
VPS13D-213ENST00000613099 DDX21Q9NR30 783 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS13D-213ENST00000613099 CARD8Q9Y2G2 431 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 NCOA1Q15788 1441 aa5.47□□□□□ -1.53
VPS13D-213ENST00000613099 DNMT1P26358 1616 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms