RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 BDP1A6H8Y1 2624 aa12.84□□□□□ -0.35
SSX3-204ENST00000612497 HOXA7P31268 230 aaPredicted RBP12.84□□□□□ -0.35
SSX3-204ENST00000612497 CAP2P40123 477 aa12.84□□□□□ -0.35
SSX3-204ENST00000612497 BTDP43251 543 aa12.84□□□□□ -0.35
SSX3-204ENST00000612497 ERVK-9P63128 1117 aa12.84□□□□□ -0.35
SSX3-204ENST00000612497 ERVK-24P63145 666 aa12.84□□□□□ -0.35
SSX3-204ENST00000612497 MAP2K5Q13163 448 aa12.84□□□□□ -0.35
SSX3-204ENST00000612497 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
SSX3-204ENST00000612497 GJC2Q5T442 439 aaPredicted RBP12.84□□□□□ -0.35
SSX3-204ENST00000612497 SLC39A5Q6ZMH5 540 aa12.84□□□□□ -0.35
SSX3-204ENST00000612497 SLF2Q8IX21 1173 aa12.84□□□□□ -0.35
SSX3-204ENST00000612497 ZGPATQ8N5A5 531 aaKnown RBP12.84□□□□□ -0.35
SSX3-204ENST00000612497 EDC3Q96F86 508 aaKnown RBP12.84□□□□□ -0.35
SSX3-204ENST00000612497 ASB2Q96Q27 587 aa12.84□□□□□ -0.35
SSX3-204ENST00000612497 DENND2AQ9ULE3 1009 aa12.84□□□□□ -0.35
SSX3-204ENST00000612497 IL16Q14005 1332 aa12.84□□□□□ -0.35
SSX3-204ENST00000612497 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
SSX3-204ENST00000612497 EXOSC9Q06265 439 aaKnown RBP12.83□□□□□ -0.36
SSX3-204ENST00000612497 RRP1BQ14684 758 aaKnown RBP12.83□□□□□ -0.36
SSX3-204ENST00000612497 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
SSX3-204ENST00000612497 TRIM60Q495X7 471 aa12.83□□□□□ -0.36
SSX3-204ENST00000612497 SH3RF1Q7Z6J0 888 aa12.83□□□□□ -0.36
SSX3-204ENST00000612497 ARRDC4Q8NCT1 418 aa12.83□□□□□ -0.36
SSX3-204ENST00000612497 IL27Q8NEV9 243 aa12.83□□□□□ -0.36
SSX3-204ENST00000612497 UHRF1Q96T88 793 aaPredicted RBP12.83□□□□□ -0.36
SSX3-204ENST00000612497 PDLIM7Q9NR12 457 aa12.83□□□□□ -0.36
SSX3-204ENST00000612497 FLRT1Q9NZU1 646 aa12.83□□□□□ -0.36
SSX3-204ENST00000612497 THEGQ9P2T0 379 aa12.83□□□□□ -0.36
SSX3-204ENST00000612497 ABCF2Q9UG63 623 aa12.83□□□□□ -0.36
SSX3-204ENST00000612497 NDUFB9Q9Y6M9 179 aa12.83□□□□□ -0.36
SSX3-204ENST00000612497 UTYO14607 1347 aa12.83□□□□□ -0.36
SSX3-204ENST00000612497 TCF20Q9UGU0 1960 aaKnown RBP12.82□□□□□ -0.36
SSX3-204ENST00000612497 TRIM43BA6NCK2 446 aa12.82□□□□□ -0.36
SSX3-204ENST00000612497 KBTBD13C9JR72 458 aa12.82□□□□□ -0.36
SSX3-204ENST00000612497 EYA2O00167 538 aa12.82□□□□□ -0.36
SSX3-204ENST00000612497 SEMA3EO15041 775 aa12.82□□□□□ -0.36
SSX3-204ENST00000612497 GLRX3O76003 335 aaKnown RBP12.82□□□□□ -0.36
SSX3-204ENST00000612497 DNAJB2P25686 324 aa12.82□□□□□ -0.36
SSX3-204ENST00000612497 BACE1P56817 501 aa12.82□□□□□ -0.36
SSX3-204ENST00000612497 ATP2B2Q01814 1243 aa12.82□□□□□ -0.36
SSX3-204ENST00000612497 WDR78Q5VTH9 848 aa12.82□□□□□ -0.36
SSX3-204ENST00000612497 TRIM43Q96BQ3 446 aaPredicted RBP12.82□□□□□ -0.36
SSX3-204ENST00000612497 WDR18Q9BV38 432 aa12.82□□□□□ -0.36
SSX3-204ENST00000612497 ZNF576Q9H609 170 aa12.82□□□□□ -0.36
SSX3-204ENST00000612497 CYP2C19P33261 490 aa12.81□□□□□ -0.36
SSX3-204ENST00000612497 PHKA1P46020 1223 aa12.81□□□□□ -0.36
SSX3-204ENST00000612497 MRPS5P82675 430 aaKnown RBP12.81□□□□□ -0.36
SSX3-204ENST00000612497 ATP2B3Q16720 1220 aa12.81□□□□□ -0.36
SSX3-204ENST00000612497 GTF3C2Q8WUA4 911 aaPredicted RBP12.81□□□□□ -0.36
SSX3-204ENST00000612497 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
SSX3-204ENST00000612497 GAS2L1Q99501 681 aaPredicted RBP12.81□□□□□ -0.36
SSX3-204ENST00000612497 C1QTNF1Q9BXJ1 281 aa12.81□□□□□ -0.36
SSX3-204ENST00000612497 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
SSX3-204ENST00000612497 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.8□□□□□ -0.36
SSX3-204ENST00000612497 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.8□□□□□ -0.36
SSX3-204ENST00000612497 C19orf81C9J6K1 198 aa12.8□□□□□ -0.36
SSX3-204ENST00000612497 EPHB4P54760 987 aa12.8□□□□□ -0.36
SSX3-204ENST00000612497 CCNA1P78396 465 aa12.8□□□□□ -0.36
SSX3-204ENST00000612497 ANO1Q5XXA6 986 aa12.8□□□□□ -0.36
SSX3-204ENST00000612497 SPTY2D1Q68D10 685 aaPredicted RBP12.8□□□□□ -0.36
SSX3-204ENST00000612497 TRPV1Q8NER1 839 aa12.8□□□□□ -0.36
SSX3-204ENST00000612497 FERMT2Q96AC1 680 aa12.8□□□□□ -0.36
SSX3-204ENST00000612497 TIFAQ96CG3 184 aa12.8□□□□□ -0.36
SSX3-204ENST00000612497 MROH7-TTC4A0A0A0MT08 1334 aa12.8□□□□□ -0.36
SSX3-204ENST00000612497 GPR75-ASB3A0A0A6YYF3 556 aa12.79□□□□□ -0.36
SSX3-204ENST00000612497 SLC15A5A6NIM6 579 aa12.79□□□□□ -0.36
SSX3-204ENST00000612497 USP17L10C9JJH3 530 aa12.79□□□□□ -0.36
SSX3-204ENST00000612497 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
SSX3-204ENST00000612497 ASNSP08243 561 aa12.79□□□□□ -0.36
SSX3-204ENST00000612497 ADCYAP1R1P41586 468 aa12.79□□□□□ -0.36
SSX3-204ENST00000612497 RHBDL3P58872 404 aa12.79□□□□□ -0.36
SSX3-204ENST00000612497 SNX17Q15036 470 aa12.79□□□□□ -0.36
SSX3-204ENST00000612497 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
SSX3-204ENST00000612497 CEP126Q9P2H0 1117 aa12.79□□□□□ -0.36
SSX3-204ENST00000612497 HERC5Q9UII4 1024 aaKnown RBP12.79□□□□□ -0.36
SSX3-204ENST00000612497 TACC3Q9Y6A5 838 aa12.79□□□□□ -0.36
SSX3-204ENST00000612497 IVNS1ABPQ9Y6Y0 642 aa12.79□□□□□ -0.36
SSX3-204ENST00000612497 PTPREP23469 700 aa12.78□□□□□ -0.36
SSX3-204ENST00000612497 ITGB8P26012 769 aa12.78□□□□□ -0.36
SSX3-204ENST00000612497 TLE2Q04725 743 aa12.78□□□□□ -0.36
SSX3-204ENST00000612497 CCDC85BQ15834 202 aaPredicted RBP12.78□□□□□ -0.36
SSX3-204ENST00000612497 AKNAD1Q5T1N1 836 aa12.78□□□□□ -0.36
SSX3-204ENST00000612497 ATG9AQ7Z3C6 839 aa12.78□□□□□ -0.36
SSX3-204ENST00000612497 NPLOC4Q8TAT6 608 aa12.78□□□□□ -0.36
SSX3-204ENST00000612497 SIL1Q9H173 461 aa12.78□□□□□ -0.36
SSX3-204ENST00000612497 HCN4Q9Y3Q4 1203 aa12.78□□□□□ -0.36
SSX3-204ENST00000612497 SYNGAP1Q96PV0 1343 aa12.78□□□□□ -0.36
SSX3-204ENST00000612497 PLXNA1Q9UIW2 1896 aa12.78□□□□□ -0.36
SSX3-204ENST00000612497 CLTBP09497 229 aa12.77□□□□□ -0.37
SSX3-204ENST00000612497 CYBAP13498 195 aa12.77□□□□□ -0.37
SSX3-204ENST00000612497 RAG1P15918 1043 aa12.77□□□□□ -0.37
SSX3-204ENST00000612497 ADORA1P30542 326 aa12.77□□□□□ -0.37
SSX3-204ENST00000612497 RFX5P48382 616 aaPredicted RBP12.77□□□□□ -0.37
SSX3-204ENST00000612497 MECOMQ03112 1051 aa12.77□□□□□ -0.37
SSX3-204ENST00000612497 FPGSQ05932 587 aa12.77□□□□□ -0.37
SSX3-204ENST00000612497 RASGRF1Q13972 1273 aa12.77□□□□□ -0.37
SSX3-204ENST00000612497 CCDC102BQ68D86 513 aa12.77□□□□□ -0.37
SSX3-204ENST00000612497 ERICH6Q7L0X2 663 aa12.77□□□□□ -0.37
SSX3-204ENST00000612497 NECAB3Q96P71 396 aaPredicted RBP12.77□□□□□ -0.37
SSX3-204ENST00000612497 PRDM12Q9H4Q4 367 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms