RNA–Protein interactions for RNA: ENST00000611905.1

CCL16-205, Transcript of C-C motif chemokine ligand 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL16, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-205ENST00000611905 SF3A1Q15459 793 aaKnown RBP8.72□□□□□ -1.01
CCL16-205ENST00000611905 CAVIN4Q5BKX8 364 aa8.72□□□□□ -1.01
CCL16-205ENST00000611905 NFXL1Q6ZNB6 911 aa8.72□□□□□ -1.01
CCL16-205ENST00000611905 RAB11FIP4Q86YS3 637 aa8.72□□□□□ -1.01
CCL16-205ENST00000611905 KIAA1524Q8TCG1 905 aa8.72□□□□□ -1.01
CCL16-205ENST00000611905 TIGD1Q96MW7 591 aa8.72□□□□□ -1.01
CCL16-205ENST00000611905 INCENPQ9NQS7 918 aa8.72□□□□□ -1.01
CCL16-205ENST00000611905 COL5A3P25940 1745 aaPredicted RBP8.72□□□□□ -1.01
CCL16-205ENST00000611905 KAT6BQ8WYB5 2073 aa8.72□□□□□ -1.01
CCL16-205ENST00000611905 BCORQ6W2J9 1755 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 C4AP0C0L4 1744 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 C4BP0C0L5 1744 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 MAGEB6P1A0A0J9YX57 407 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 CCDC196A0A1B0GTZ2 297 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 RANBP6O60518 1105 aaKnown RBP8.71□□□□□ -1.01
CCL16-205ENST00000611905 FGRP09769 529 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 PSEN2P49810 448 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 NDUFA8P51970 172 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 RPS8P62241 208 aaKnown RBP8.71□□□□□ -1.01
CCL16-205ENST00000611905 MAP3K9P80192 1104 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 PPARAQ07869 468 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 PTPAQ15257 358 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 FAM98CQ17RN3 349 aaKnown RBP8.71□□□□□ -1.01
CCL16-205ENST00000611905 FNBP4Q8N3X1 1017 aaPredicted RBP8.71□□□□□ -1.01
CCL16-205ENST00000611905 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.01
CCL16-205ENST00000611905 FAM84BQ96KN1 310 aaPredicted RBP8.71□□□□□ -1.01
CCL16-205ENST00000611905 ZNF830Q96NB3 372 aaPredicted RBP8.71□□□□□ -1.01
CCL16-205ENST00000611905 MAP3K14Q99558 947 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 BPIFA3Q9BQP9 254 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 RIOK1Q9BRS2 568 aaKnown RBP8.71□□□□□ -1.01
CCL16-205ENST00000611905 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.71□□□□□ -1.01
CCL16-205ENST00000611905 BRIP1Q9BX63 1249 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 ANKRD2Q9GZV1 360 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 TTC12Q9H892 705 aaPredicted RBP8.71□□□□□ -1.01
CCL16-205ENST00000611905 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.71□□□□□ -1.01
CCL16-205ENST00000611905 GJB4Q9NTQ9 266 aa8.71□□□□□ -1.01
CCL16-205ENST00000611905 A0A1B0GVL5 298 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 GYG1P46976 350 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 RBM6P78332 1123 aaKnown RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 TRIM29Q14134 588 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 WTAPQ15007 396 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 SEC23AQ15436 765 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 TBC1D9BQ66K14 1250 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 C11orf57Q6ZUT1 292 aaPredicted RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 ADGRA1Q86SQ6 560 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 MICU3Q86XE3 530 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 VPS37DQ86XT2 251 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 ELOA2Q8IYF1 753 aaPredicted RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 CRACR2BQ8N4Y2 399 aaPredicted RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 JMYQ8N9B5 988 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 PHKBQ93100 1093 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 MRFAP1L1Q96HT8 127 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 AIFM3Q96NN9 605 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 SDF4Q9BRK5 362 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 TRIM5Q9C035 493 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 NAT10Q9H0A0 1025 aaKnown RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 KCNF1Q9H3M0 494 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 RAI14Q9P0K7 980 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 KIAA1468Q9P260 1216 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 PCDHGA4Q9Y5G9 962 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 MYO5AQ9Y4I1 1855 aaKnown RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 ERICH2A1L162 156 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 GOLGA6L19H0YKK7 550 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 CUTAO60888 179 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 WDHD1O75717 1129 aaPredicted RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 ZNF202O95125 648 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 RTN1Q16799 776 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 RBM26Q5T8P6 1007 aaKnown RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 TPTE2Q6XPS3 522 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 NBPF11Q86T75 865 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 DHX40Q8IX18 779 aaKnown RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 CEP57L1Q8IYX8 460 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 FANCBQ8NB91 859 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 ESR2Q92731 530 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 CELF1Q92879 486 aaKnown RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 NGLY1Q96IV0 654 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 NLRP3Q96P20 1036 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 SETDB2Q96T68 719 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 HPSEQ9Y251 543 aa8.7□□□□□ -1.02
CCL16-205ENST00000611905 R3HCC1Q9Y3T6 440 aaKnown RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 MORC2Q9Y6X9 1032 aaPredicted RBP8.7□□□□□ -1.02
CCL16-205ENST00000611905 COL4A1P02462 1669 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 COL1A1P02452 1464 aaPredicted RBP8.69□□□□□ -1.02
CCL16-205ENST00000611905 DEXIO95424 95 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 PFKFB1P16118 471 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 RXRAP19793 462 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 GTF2E1P29083 439 aaPredicted RBP8.69□□□□□ -1.02
CCL16-205ENST00000611905 TM4SF1P30408 202 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 NT5C2P49902 561 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 PIP4K2BP78356 416 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 NOSTRINQ8IVI9 506 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 TRIM22Q8IYM9 498 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 MPNDQ8N594 471 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 MIGA1Q8NAN2 632 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 UBAC1Q9BSL1 405 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 SLC26A6Q9BXS9 759 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 FOXP1Q9H334 677 aaPredicted RBP8.69□□□□□ -1.02
CCL16-205ENST00000611905 ABCF2Q9UG63 623 aa8.69□□□□□ -1.02
CCL16-205ENST00000611905 IRS2Q9Y4H2 1338 aa8.68□□□□□ -1.02
CCL16-205ENST00000611905 WTIPA6NIX2 430 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms