RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 NKX2-3Q8TAU0 364 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 HOOK2Q96ED9 719 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 TTC14Q96N46 770 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 DNAJC18Q9H819 358 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 ZSWIM5Q9P217 1185 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 SCAF8Q9UPN6 1271 aaKnown RBP18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 SIPA1L1O43166 1804 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 PRDM1O75626 825 aa18.85■□□□□ 0.61
CLTCL1-207ENST00000611723 RASA1P20936 1047 aa18.85■□□□□ 0.61
CLTCL1-207ENST00000611723 CTCFP49711 727 aaPredicted RBP18.85■□□□□ 0.61
CLTCL1-207ENST00000611723 NEK4P51957 841 aa18.85■□□□□ 0.61
CLTCL1-207ENST00000611723 CDAN1Q8IWY9 1227 aa18.85■□□□□ 0.61
CLTCL1-207ENST00000611723 CRACR2BQ8N4Y2 399 aaPredicted RBP18.85■□□□□ 0.61
CLTCL1-207ENST00000611723 UPF3BQ9BZI7 483 aaKnown RBP18.85■□□□□ 0.61
CLTCL1-207ENST00000611723 TMEM88BA6NKF7 163 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 KDM4AO75164 1064 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 CPA1P15085 419 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 ANTXR2P58335 489 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 SUPT20HL1Q3ZLR7 823 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 RRP12Q5JTH9 1297 aaKnown RBP18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 NBPF12Q5TAG4 269 aaPredicted RBP18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 CYB5R4Q7L1T6 521 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 CDC37L1Q7L3B6 337 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 KRT26Q7Z3Y9 468 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 CCDC17Q96LX7 622 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 TRIM34Q9BYJ4 488 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 PDRG1Q9NUG6 133 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 TCP11L1Q9NUJ3 509 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 WBP1LQ9NX94 342 aa18.84■□□□□ 0.61
CLTCL1-207ENST00000611723 RANBP6O60518 1105 aaKnown RBP18.83■□□□□ 0.6
CLTCL1-207ENST00000611723 NEDD1Q8NHV4 660 aa18.83■□□□□ 0.6
CLTCL1-207ENST00000611723 SNX21Q969T3 373 aa18.83■□□□□ 0.6
CLTCL1-207ENST00000611723 TMEM87BQ96K49 555 aa18.83■□□□□ 0.6
CLTCL1-207ENST00000611723 AGXT2Q9BYV1 514 aa18.83■□□□□ 0.6
CLTCL1-207ENST00000611723 TOMM22Q9NS69 142 aa18.83■□□□□ 0.6
CLTCL1-207ENST00000611723 PRC1O43663 620 aa18.82■□□□□ 0.6
CLTCL1-207ENST00000611723 SLURP2P0DP57 97 aa18.82■□□□□ 0.6
CLTCL1-207ENST00000611723 TFAP4Q01664 338 aa18.82■□□□□ 0.6
CLTCL1-207ENST00000611723 DCAF15Q66K64 600 aa18.82■□□□□ 0.6
CLTCL1-207ENST00000611723 USP48Q86UV5 1035 aa18.82■□□□□ 0.6
CLTCL1-207ENST00000611723 IGDCC4Q8TDY8 1250 aa18.82■□□□□ 0.6
CLTCL1-207ENST00000611723 CLEC11AQ9Y240 323 aa18.82■□□□□ 0.6
CLTCL1-207ENST00000611723 TSPY2A6NKD2 308 aa18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 ADM5C9JUS6 153 aa18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 ST18O60284 1047 aa18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 SLC34A2O95436 690 aa18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 HSPA8P11142 646 aaKnown RBP18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 CERKLQ49MI3 558 aaPredicted RBP18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 CCDC178Q5BJE1 867 aa18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 FAM47AQ5JRC9 791 aa18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 MAP1SQ66K74 1059 aaPredicted RBP18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 MIGA2Q7L4E1 593 aa18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 ZNF112Q9UJU3 913 aa18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 PLIN4Q96Q06 1357 aa18.81■□□□□ 0.6
CLTCL1-207ENST00000611723 FAM196BA6NMK8 535 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 PHF20L1A8MW92 1017 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 TSPY3P0CV98 308 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 TSPY8P0CW00 308 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 NOVP48745 357 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 MCM2P49736 904 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 ANKRD1Q15327 319 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 PRAMEF18Q5VWM3 479 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 CHST3Q7LGC8 479 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 IQCA1Q86XH1 822 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 ANKS1AQ92625 1134 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 ABHD8Q96I13 439 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 GINM1Q9NU53 330 aa18.8■□□□□ 0.6
CLTCL1-207ENST00000611723 IGKV6D-41A0A0C4DH26 115 aa18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 SH2B2O14492 632 aaPredicted RBP18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 AKR1B1P15121 316 aa18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 LIFRP42702 1097 aa18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 TOB2Q14106 344 aaPredicted RBP18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 RRP1BQ14684 758 aaKnown RBP18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 SART3Q15020 963 aaKnown RBP18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 SEC23AQ15436 765 aa18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 Q6ZUG5 572 aa18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 TMTC2Q8N394 836 aa18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 TCEANC2Q96MN5 208 aa18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 ZSCAN10Q96SZ4 725 aaPredicted RBP18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 ZNF341Q9BYN7 854 aa18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 GLIS2Q9BZE0 524 aaPredicted RBP18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 IL17RBQ9NRM6 502 aa18.79■□□□□ 0.6
CLTCL1-207ENST00000611723 IFIT3O14879 490 aaKnown RBP18.78■□□□□ 0.6
CLTCL1-207ENST00000611723 AK2P54819 239 aa18.78■□□□□ 0.6
CLTCL1-207ENST00000611723 EVCP57679 992 aa18.78■□□□□ 0.6
CLTCL1-207ENST00000611723 FMR1Q06787 632 aaKnown RBP eCLIP18.78■□□□□ 0.6
CLTCL1-207ENST00000611723 DGKHQ86XP1 1220 aa18.78■□□□□ 0.6
CLTCL1-207ENST00000611723 CDCA5Q96FF9 252 aa18.78■□□□□ 0.6
CLTCL1-207ENST00000611723 UBAC1Q9BSL1 405 aa18.78■□□□□ 0.6
CLTCL1-207ENST00000611723 LRRC2Q9BYS8 371 aa18.78■□□□□ 0.6
CLTCL1-207ENST00000611723 ANGEL1Q9UNK9 670 aaKnown RBP18.78■□□□□ 0.6
CLTCL1-207ENST00000611723 RASSF10A6NK89 507 aa18.77■□□□□ 0.6
CLTCL1-207ENST00000611723 CTNND1O60716 968 aaKnown RBP18.77■□□□□ 0.6
CLTCL1-207ENST00000611723 CD2BP2O95400 341 aaKnown RBP18.77■□□□□ 0.6
CLTCL1-207ENST00000611723 CAP2P40123 477 aa18.77■□□□□ 0.6
CLTCL1-207ENST00000611723 ABCB5Q2M3G0 1257 aa18.77■□□□□ 0.6
CLTCL1-207ENST00000611723 DEFB115Q30KQ5 88 aa18.77■□□□□ 0.6
CLTCL1-207ENST00000611723 TMEM67Q5HYA8 995 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms