RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 B4GALNT3Q6L9W6 998 aa21.41■■□□□ 1.02
MUC1-224ENST00000611577 TBC1D9Q6ZT07 1266 aa21.41■■□□□ 1.02
MUC1-224ENST00000611577 DNAJC2Q99543 621 aaKnown RBP21.41■■□□□ 1.02
MUC1-224ENST00000611577 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.41■■□□□ 1.02
MUC1-224ENST00000611577 LAMA3Q16787 3333 aa21.4■■□□□ 1.02
MUC1-224ENST00000611577 HMGCS2P54868 508 aa21.4■■□□□ 1.02
MUC1-224ENST00000611577 GSTO1P78417 241 aa21.4■■□□□ 1.02
MUC1-224ENST00000611577 ZNF280CQ8ND82 737 aa21.4■■□□□ 1.02
MUC1-224ENST00000611577 PAWRQ96IZ0 340 aaKnown RBP21.4■■□□□ 1.02
MUC1-224ENST00000611577 CRISPLD2Q9H0B8 497 aa21.4■■□□□ 1.02
MUC1-224ENST00000611577 LOC285556D6RIA3 1793 aa21.4■■□□□ 1.02
MUC1-224ENST00000611577 COL2A1P02458 1487 aaPredicted RBP21.39■■□□□ 1.02
MUC1-224ENST00000611577 A0A1W2PPC1 479 aa21.39■■□□□ 1.01
MUC1-224ENST00000611577 LDHCP07864 332 aa21.39■■□□□ 1.01
MUC1-224ENST00000611577 GCLCP48506 637 aaPredicted RBP21.39■■□□□ 1.01
MUC1-224ENST00000611577 PABPC4Q13310 644 aaKnown RBP eCLIP21.39■■□□□ 1.017e-9■■■□□ 14.9
MUC1-224ENST00000611577 DIS3LQ8TF46 1054 aaKnown RBP21.39■■□□□ 1.01
MUC1-224ENST00000611577 NSUN4Q96CB9 384 aaKnown RBP21.39■■□□□ 1.01
MUC1-224ENST00000611577 ECHDC1Q9NTX5 307 aa21.39■■□□□ 1.01
MUC1-224ENST00000611577 MAP4K4O95819 1239 aaPredicted RBP21.38■■□□□ 1.01
MUC1-224ENST00000611577 HMGCRP04035 888 aa21.38■■□□□ 1.01
MUC1-224ENST00000611577 TTF1Q15361 905 aaPredicted RBP21.38■■□□□ 1.01
MUC1-224ENST00000611577 NECAB2Q7Z6G3 386 aa21.38■■□□□ 1.01
MUC1-224ENST00000611577 SMC5Q8IY18 1101 aa21.38■■□□□ 1.01
MUC1-224ENST00000611577 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.38■■□□□ 1.01
MUC1-224ENST00000611577 TBC1D2Q9BYX2 928 aa21.38■■□□□ 1.01
MUC1-224ENST00000611577 BOLA2Q9H3K6 86 aa21.38■■□□□ 1.01
MUC1-224ENST00000611577 STAP2Q9UGK3 403 aa21.38■■□□□ 1.01
MUC1-224ENST00000611577 NDUFB9Q9Y6M9 179 aa21.38■■□□□ 1.01
MUC1-224ENST00000611577 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
MUC1-224ENST00000611577 DOCK3Q8IZD9 2030 aa21.38■■□□□ 1.01
MUC1-224ENST00000611577 MYO5AQ9Y4I1 1855 aaKnown RBP21.37■■□□□ 1.01
MUC1-224ENST00000611577 IDH1O75874 414 aaKnown RBP21.37■■□□□ 1.01
MUC1-224ENST00000611577 CYP2E1P05181 493 aaPredicted RBP21.37■■□□□ 1.01
MUC1-224ENST00000611577 ATP5JP18859 108 aa21.37■■□□□ 1.01
MUC1-224ENST00000611577 CAP2P40123 477 aa21.37■■□□□ 1.01
MUC1-224ENST00000611577 TEX11Q8IYF3 940 aa21.37■■□□□ 1.01
MUC1-224ENST00000611577 ATAD5Q96QE3 1844 aa21.36■■□□□ 1.01
MUC1-224ENST00000611577 USP17L5A8MUK1 530 aa21.36■■□□□ 1.01
MUC1-224ENST00000611577 SOX1O00570 391 aaPredicted RBP21.36■■□□□ 1.01
MUC1-224ENST00000611577 ERC2O15083 957 aa21.36■■□□□ 1.01
MUC1-224ENST00000611577 RRP1BQ14684 758 aaKnown RBP21.36■■□□□ 1.01
MUC1-224ENST00000611577 NOL10Q9BSC4 688 aaKnown RBP21.36■■□□□ 1.01
MUC1-224ENST00000611577 LNPKQ9C0E8 428 aa21.36■■□□□ 1.01
MUC1-224ENST00000611577 ASCC2Q9H1I8 757 aaPredicted RBP21.36■■□□□ 1.01
MUC1-224ENST00000611577 AS3MTQ9HBK9 375 aa21.36■■□□□ 1.01
MUC1-224ENST00000611577 GOLIM4O00461 696 aa21.35■■□□□ 1.01
MUC1-224ENST00000611577 MAP3K12Q12852 859 aa21.35■■□□□ 1.01
MUC1-224ENST00000611577 NAA16Q6N069 864 aaPredicted RBP21.35■■□□□ 1.01
MUC1-224ENST00000611577 C7orf61Q8IZ16 206 aa21.35■■□□□ 1.01
MUC1-224ENST00000611577 PIH1D3Q9NQM4 214 aaKnown RBP21.35■■□□□ 1.01
MUC1-224ENST00000611577 HERC5Q9UII4 1024 aaKnown RBP21.35■■□□□ 1.01
MUC1-224ENST00000611577 ALPK3Q96L96 1907 aa21.35■■□□□ 1.01
MUC1-224ENST00000611577 TTC41PQ6P2S7 1318 aa21.34■■□□□ 1.01
MUC1-224ENST00000611577 MX1P20591 662 aa21.34■■□□□ 1.01
MUC1-224ENST00000611577 TRIM32Q13049 653 aa21.34■■□□□ 1.01
MUC1-224ENST00000611577 SH3D19Q5HYK7 790 aa21.34■■□□□ 1.01
MUC1-224ENST00000611577 CHD1LQ86WJ1 897 aa21.34■■□□□ 1.01
MUC1-224ENST00000611577 ANKLE1Q8NAG6 615 aa21.34■■□□□ 1.01
MUC1-224ENST00000611577 SH3RF3Q8TEJ3 882 aaPredicted RBP21.34■■□□□ 1.01
MUC1-224ENST00000611577 LRCH3Q96II8 777 aa21.34■■□□□ 1.01
MUC1-224ENST00000611577 ANTXR1Q9H6X2 564 aa21.34■■□□□ 1.01
MUC1-224ENST00000611577 PAG1Q9NWQ8 432 aa21.34■■□□□ 1.01
MUC1-224ENST00000611577 GJD2Q9UKL4 321 aa21.34■■□□□ 1.01
MUC1-224ENST00000611577 RPTORQ8N122 1335 aa21.33■■□□□ 1.01
MUC1-224ENST00000611577 IRX3P78415 501 aaPredicted RBP21.33■■□□□ 1.01
MUC1-224ENST00000611577 MTMR2Q13614 643 aa21.33■■□□□ 1.01
MUC1-224ENST00000611577 TSHZ3Q63HK5 1081 aa21.33■■□□□ 1.01
MUC1-224ENST00000611577 HAUS7Q99871 368 aa21.33■■□□□ 1.01
MUC1-224ENST00000611577 HMX1Q9NP08 348 aaPredicted RBP21.33■■□□□ 1.01
MUC1-224ENST00000611577 IGSF3O75054 1194 aa21.32■■□□□ 1
MUC1-224ENST00000611577 NUCB1Q02818 461 aa21.32■■□□□ 1
MUC1-224ENST00000611577 OTUD7AQ8TE49 926 aaPredicted RBP21.32■■□□□ 1
MUC1-224ENST00000611577 TMOD4Q9NZQ9 345 aa21.32■■□□□ 1
MUC1-224ENST00000611577 PI4KBQ9UBF8 816 aa21.32■■□□□ 1
MUC1-224ENST00000611577 MORF4L1Q9UBU8 362 aa21.32■■□□□ 1
MUC1-224ENST00000611577 ZMYND8Q9ULU4 1186 aaPredicted RBP21.32■■□□□ 1
MUC1-224ENST00000611577 GLRX3O76003 335 aaKnown RBP21.31■■□□□ 1
MUC1-224ENST00000611577 SLC17A8Q8NDX2 589 aa21.31■■□□□ 1
MUC1-224ENST00000611577 TRIB2Q92519 343 aa21.31■■□□□ 1
MUC1-224ENST00000611577 WDR18Q9BV38 432 aa21.31■■□□□ 1
MUC1-224ENST00000611577 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.31■■□□□ 1
MUC1-224ENST00000611577 NBPF3Q9H094 633 aa21.31■■□□□ 1
MUC1-224ENST00000611577 DHX36Q9H2U1 1008 aaKnown RBP21.31■■□□□ 1
MUC1-224ENST00000611577 AATFQ9NY61 560 aaKnown RBP eCLIP21.31■■□□□ 1
MUC1-224ENST00000611577 BAG3O95817 575 aa21.3■■□□□ 1
MUC1-224ENST00000611577 CYP2B6P20813 491 aa21.3■■□□□ 1
MUC1-224ENST00000611577 CYP7A1P22680 504 aa21.3■■□□□ 1
MUC1-224ENST00000611577 BACE1P56817 501 aa21.3■■□□□ 1
MUC1-224ENST00000611577 MAGEB6Q8N7X4 407 aa21.3■■□□□ 1
MUC1-224ENST00000611577 EDC3Q96F86 508 aaKnown RBP21.3■■□□□ 1
MUC1-224ENST00000611577 GDF15Q99988 308 aa21.3■■□□□ 1
MUC1-224ENST00000611577 C11orf49Q9H6J7 331 aa21.3■■□□□ 1
MUC1-224ENST00000611577 DDX60LQ5H9U9 1706 aaKnown RBP21.29■■□□□ 1
MUC1-224ENST00000611577 SIPA1L1O43166 1804 aa21.29■■□□□ 1
MUC1-224ENST00000611577 MYH7P12883 1935 aa21.29■■□□□ 1
MUC1-224ENST00000611577 PEX10O60683 326 aa21.29■■□□□ 1
MUC1-224ENST00000611577 ASNSP08243 561 aa21.29■■□□□ 1
MUC1-224ENST00000611577 MAPKAPK5Q8IW41 473 aa21.29■■□□□ 1
MUC1-224ENST00000611577 TRIM34Q9BYJ4 488 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms