RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 NUTM2AQ8IVF1 878 aaPredicted RBP16.74■□□□□ 0.27
CTCFL-219ENST00000608720 FEZ2Q9UHY8 353 aaPredicted RBP16.74■□□□□ 0.27
CTCFL-219ENST00000608720 SLC4A4Q9Y6R1 1079 aa16.74■□□□□ 0.27
CTCFL-219ENST00000608720 SHANK3Q9BYB0 1731 aa16.74■□□□□ 0.27
CTCFL-219ENST00000608720 VWA3AA6NCI4 1184 aa16.74■□□□□ 0.27
CTCFL-219ENST00000608720 EFCAB8A8MWE9 144 aa16.74■□□□□ 0.27
CTCFL-219ENST00000608720 GOLGA8FQ08AF8 430 aa16.74■□□□□ 0.27
CTCFL-219ENST00000608720 GOLGA8DPQ0D2H9 430 aa16.74■□□□□ 0.27
CTCFL-219ENST00000608720 ZNF34Q8IZ26 560 aa16.74■□□□□ 0.27
CTCFL-219ENST00000608720 CCDC34Q96HJ3 373 aa16.74■□□□□ 0.27
CTCFL-219ENST00000608720 EFCC1Q9HA90 598 aa16.74■□□□□ 0.27
CTCFL-219ENST00000608720 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
CTCFL-219ENST00000608720 ERICH4A6NGS2 130 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 PRKAB2O43741 272 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 ERCC5P28715 1186 aaPredicted RBP16.73■□□□□ 0.27
CTCFL-219ENST00000608720 HNRNPH2P55795 449 aaKnown RBP16.73■□□□□ 0.27
CTCFL-219ENST00000608720 GRIN1Q05586 938 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 FMR1Q06787 632 aaKnown RBP eCLIP16.73■□□□□ 0.271e-7■■□□□ 12.2
CTCFL-219ENST00000608720 PPP2R5BQ15173 497 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 DZIP3Q86Y13 1208 aaKnown RBP16.73■□□□□ 0.27
CTCFL-219ENST00000608720 PDILTQ8N807 584 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 FANCBQ8NB91 859 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 ZBTB1Q9Y2K1 713 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 PCDHB6Q9Y5E3 794 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 PARP3Q9Y6F1 533 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 ATP8B1O43520 1251 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 TADA3O75528 432 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 CASQ1P31415 396 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 IL6STP40189 918 aaPredicted RBP16.73■□□□□ 0.27
CTCFL-219ENST00000608720 TC2NQ8N9U0 490 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 SLC4A9Q96Q91 983 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 FHOD1Q9Y613 1164 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
CTCFL-219ENST00000608720 ACTN4O43707 911 aaKnown RBP16.72■□□□□ 0.27
CTCFL-219ENST00000608720 PLCD1P51178 756 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 TEX35Q5T0J7 233 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 TXLNBQ8N3L3 684 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 LCORLQ8N3X6 602 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 SPATA20Q8TB22 786 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 FBXO41Q8TF61 875 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 ZKSCAN3Q9BRR0 538 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 NR5A1Q13285 461 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 PTPN21Q16825 1174 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 TMCO3Q6UWJ1 677 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 ZNF654Q8IZM8 581 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 CARD6Q9BX69 1037 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 RAI14Q9P0K7 980 aa16.72■□□□□ 0.27
CTCFL-219ENST00000608720 ROBO1Q9Y6N7 1651 aa16.71■□□□□ 0.27
CTCFL-219ENST00000608720 FANCGO15287 622 aa16.71■□□□□ 0.27
CTCFL-219ENST00000608720 XBP1P17861 261 aa16.71■□□□□ 0.27
CTCFL-219ENST00000608720 NR1I3Q14994 352 aa16.71■□□□□ 0.27
CTCFL-219ENST00000608720 CCDC82Q8N4S0 544 aa16.71■□□□□ 0.27
CTCFL-219ENST00000608720 UBAC1Q9BSL1 405 aa16.71■□□□□ 0.27
CTCFL-219ENST00000608720 CABP5Q9NP86 173 aa16.71■□□□□ 0.27
CTCFL-219ENST00000608720 ZRANB2O95218 330 aaKnown RBP eCLIP16.7■□□□□ 0.26
CTCFL-219ENST00000608720 GNG11P61952 73 aa16.7■□□□□ 0.26
CTCFL-219ENST00000608720 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
CTCFL-219ENST00000608720 AKAP17AQ02040 695 aaKnown RBP16.7■□□□□ 0.26
CTCFL-219ENST00000608720 HSP90AA4PQ58FG1 418 aa16.7■□□□□ 0.26
CTCFL-219ENST00000608720 NUP133Q8WUM0 1156 aa16.7■□□□□ 0.26
CTCFL-219ENST00000608720 RNF26Q9BY78 433 aaPredicted RBP16.7■□□□□ 0.26
CTCFL-219ENST00000608720 CSRNP2Q9H175 543 aa16.7■□□□□ 0.26
CTCFL-219ENST00000608720 AATFQ9NY61 560 aaKnown RBP eCLIP16.7■□□□□ 0.26
CTCFL-219ENST00000608720 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
CTCFL-219ENST00000608720 PNMA6AP0CW24 399 aaPredicted RBP16.7■□□□□ 0.26
CTCFL-219ENST00000608720 ADKP55263 362 aaKnown RBP16.7■□□□□ 0.26
CTCFL-219ENST00000608720 PPARAQ07869 468 aa16.7■□□□□ 0.26
CTCFL-219ENST00000608720 RAD51AP2Q09MP3 1159 aa16.7■□□□□ 0.26
CTCFL-219ENST00000608720 YY1AP1Q9H869 796 aa16.7■□□□□ 0.26
CTCFL-219ENST00000608720 LRP5O75197 1615 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 BCL9O00512 1426 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 A0A1B0GTH6 734 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 TRIM75PA6NK02 468 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 ZNF827Q17R98 1081 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 TRMT44Q8IYL2 757 aaKnown RBP16.69■□□□□ 0.26
CTCFL-219ENST00000608720 GRAMD1CQ8IYS0 662 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 OXER1Q8TDS5 423 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 TRIM34Q9BYJ4 488 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 SAMSN1Q9NSI8 373 aaKnown RBP16.69■□□□□ 0.26
CTCFL-219ENST00000608720 LRP2BPQ9P2M1 347 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 RTL9Q8NET4 1388 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 BMP15O95972 392 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 ATP2B1P20020 1258 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 BCAMP50895 628 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 TOGARAM2Q6ZUX3 1019 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 FAM177A1Q8N128 213 aaPredicted RBP16.69■□□□□ 0.26
CTCFL-219ENST00000608720 CMTR1Q8N1G2 835 aaKnown RBP16.69■□□□□ 0.26
CTCFL-219ENST00000608720 ESR2Q92731 530 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 PANX2Q96RD6 677 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 MED15Q96RN5 788 aa16.69■□□□□ 0.26
CTCFL-219ENST00000608720 AKR1B15C9JRZ8 316 aaPredicted RBP16.68■□□□□ 0.26
CTCFL-219ENST00000608720 SNAP23O00161 211 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 SPATA1Q5VX52 437 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 SUSD4Q5VX71 490 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 WDR24Q96S15 920 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 ANAPC4Q9UJX5 808 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 IGHMBP2P38935 993 aaKnown RBP16.68■□□□□ 0.26
CTCFL-219ENST00000608720 PLA2G4AP47712 749 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 IRX3P78415 501 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms