RNA–Protein interactions for RNA: ENST00000608223.6

LINC00854-213, Long intergenic non-protein coding RNA 854, humanhuman

APPRIS ALT2 TSL 5

Gene LINC00854, Length 391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-213ENST00000608223 MS4A1P11836 297 aa17.3■□□□□ 0.36
LINC00854-213ENST00000608223 GCLCP48506 637 aaPredicted RBP17.3■□□□□ 0.36
LINC00854-213ENST00000608223 MAP3K12Q12852 859 aa17.3■□□□□ 0.36
LINC00854-213ENST00000608223 HSP90AB4PQ58FF6 505 aa17.3■□□□□ 0.36
LINC00854-213ENST00000608223 NKX2-3Q8TAU0 364 aa17.3■□□□□ 0.36
LINC00854-213ENST00000608223 RHPN1Q8TCX5 695 aa17.3■□□□□ 0.36
LINC00854-213ENST00000608223 UNC93B1Q9H1C4 597 aa17.3■□□□□ 0.36
LINC00854-213ENST00000608223 TMOD4Q9NZQ9 345 aa17.3■□□□□ 0.36
LINC00854-213ENST00000608223 GJA8P48165 433 aa17.29■□□□□ 0.36
LINC00854-213ENST00000608223 BACE1P56817 501 aa17.29■□□□□ 0.36
LINC00854-213ENST00000608223 COG6Q9Y2V7 657 aa17.29■□□□□ 0.36
LINC00854-213ENST00000608223 USP17L10C9JJH3 530 aa17.28■□□□□ 0.36
LINC00854-213ENST00000608223 INHAP05111 366 aa17.28■□□□□ 0.36
LINC00854-213ENST00000608223 IRX3P78415 501 aaPredicted RBP17.28■□□□□ 0.36
LINC00854-213ENST00000608223 IRF5Q13568 498 aa17.28■□□□□ 0.36
LINC00854-213ENST00000608223 HABP4Q5JVS0 413 aaKnown RBP17.28■□□□□ 0.36
LINC00854-213ENST00000608223 PXYLP1Q8TE99 480 aa17.28■□□□□ 0.36
LINC00854-213ENST00000608223 ZBTB21Q9ULJ3 1066 aa17.28■□□□□ 0.36
LINC00854-213ENST00000608223 C19orf81C9J6K1 198 aa17.27■□□□□ 0.36
LINC00854-213ENST00000608223 CERS3Q8IU89 383 aa17.27■□□□□ 0.36
LINC00854-213ENST00000608223 RPAP2Q8IXW5 612 aaPredicted RBP17.27■□□□□ 0.36
LINC00854-213ENST00000608223 CLASRPQ8N2M8 674 aaKnown RBP17.27■□□□□ 0.36
LINC00854-213ENST00000608223 U2AF1L4Q8WU68 220 aaKnown RBP17.27■□□□□ 0.36
LINC00854-213ENST00000608223 DPF3Q92784 378 aa17.27■□□□□ 0.36
LINC00854-213ENST00000608223 GINM1Q9NU53 330 aa17.27■□□□□ 0.36
LINC00854-213ENST00000608223 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.36
LINC00854-213ENST00000608223 PLXNB2O15031 1838 aa17.26■□□□□ 0.35
LINC00854-213ENST00000608223 PEX10O60683 326 aa17.26■□□□□ 0.35
LINC00854-213ENST00000608223 GH2P01242 217 aa17.26■□□□□ 0.35
LINC00854-213ENST00000608223 SIRT2Q8IXJ6 389 aa17.26■□□□□ 0.35
LINC00854-213ENST00000608223 KIF1BPQ96EK5 621 aa17.26■□□□□ 0.35
LINC00854-213ENST00000608223 P2RX7Q99572 595 aaKnown RBP17.26■□□□□ 0.35
LINC00854-213ENST00000608223 NAV1Q8NEY1 1877 aa17.26■□□□□ 0.35
LINC00854-213ENST00000608223 H0YGN5 161 aa17.25■□□□□ 0.35
LINC00854-213ENST00000608223 HMMRO75330 724 aa17.25■□□□□ 0.35
LINC00854-213ENST00000608223 SGPL1O95470 568 aa17.25■□□□□ 0.35
LINC00854-213ENST00000608223 HOXA7P31268 230 aaPredicted RBP17.25■□□□□ 0.35
LINC00854-213ENST00000608223 TTF1Q15361 905 aaPredicted RBP17.25■□□□□ 0.35
LINC00854-213ENST00000608223 DNAJC2Q99543 621 aaKnown RBP17.25■□□□□ 0.35
LINC00854-213ENST00000608223 ZBTB40Q9NUA8 1239 aa17.25■□□□□ 0.35
LINC00854-213ENST00000608223 SERPINB13Q9UIV8 391 aa17.25■□□□□ 0.35
LINC00854-213ENST00000608223 TRIOBPQ9H2D6 2365 aa17.24■□□□□ 0.35
LINC00854-213ENST00000608223 MAGEB6P1A0A0J9YX57 407 aa17.24■□□□□ 0.35
LINC00854-213ENST00000608223 IFIT2P09913 472 aaKnown RBP17.24■□□□□ 0.35
LINC00854-213ENST00000608223 SLC9C2Q5TAH2 1124 aa17.24■□□□□ 0.35
LINC00854-213ENST00000608223 TATDN1Q6P1N9 297 aa17.24■□□□□ 0.35
LINC00854-213ENST00000608223 TMED8Q6PL24 325 aaPredicted RBP17.24■□□□□ 0.35
LINC00854-213ENST00000608223 TTC6Q86TZ1 520 aa17.24■□□□□ 0.35
LINC00854-213ENST00000608223 DEFB118Q96PH6 123 aa17.24■□□□□ 0.35
LINC00854-213ENST00000608223 RIOK1Q9BRS2 568 aaKnown RBP17.24■□□□□ 0.35
LINC00854-213ENST00000608223 EMILIN3Q9NT22 766 aa17.24■□□□□ 0.35
LINC00854-213ENST00000608223 MORF4L1Q9UBU8 362 aa17.24■□□□□ 0.35
LINC00854-213ENST00000608223 MYH8P13535 1937 aa17.23■□□□□ 0.35
LINC00854-213ENST00000608223 GOLIM4O00461 696 aa17.23■□□□□ 0.35
LINC00854-213ENST00000608223 FARP2O94887 1054 aaPredicted RBP17.23■□□□□ 0.35
LINC00854-213ENST00000608223 TFRCP02786 760 aaKnown RBP17.23■□□□□ 0.35
LINC00854-213ENST00000608223 POLR3DP05423 398 aaPredicted RBP17.23■□□□□ 0.35
LINC00854-213ENST00000608223 PDE6AP16499 860 aa17.23■□□□□ 0.35
LINC00854-213ENST00000608223 PLCD1P51178 756 aa17.23■□□□□ 0.35
LINC00854-213ENST00000608223 HERVK_113P62684 666 aa17.23■□□□□ 0.35
LINC00854-213ENST00000608223 ZYXQ15942 572 aaKnown RBP17.23■□□□□ 0.35
LINC00854-213ENST00000608223 CERKLQ49MI3 558 aaPredicted RBP17.23■□□□□ 0.35
LINC00854-213ENST00000608223 USP17L2Q6R6M4 530 aa17.23■□□□□ 0.35
LINC00854-213ENST00000608223 UBE2Q1Q7Z7E8 422 aa17.23■□□□□ 0.35
LINC00854-213ENST00000608223 EHD4Q9H223 541 aa17.23■□□□□ 0.35
LINC00854-213ENST00000608223 TXNRD2Q9NNW7 524 aa17.23■□□□□ 0.35
LINC00854-213ENST00000608223 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
LINC00854-213ENST00000608223 GJD2Q9UKL4 321 aa17.23■□□□□ 0.35
LINC00854-213ENST00000608223 COLQQ9Y215 455 aaPredicted RBP17.23■□□□□ 0.35
LINC00854-213ENST00000608223 DDX60LQ5H9U9 1706 aaKnown RBP17.22■□□□□ 0.35
LINC00854-213ENST00000608223 MYH7P12883 1935 aa17.22■□□□□ 0.35
LINC00854-213ENST00000608223 BAZ2AQ9UIF9 1905 aaKnown RBP17.22■□□□□ 0.35
LINC00854-213ENST00000608223 RAB3GAP1Q15042 981 aa17.22■□□□□ 0.35
LINC00854-213ENST00000608223 ABCB5Q2M3G0 1257 aa17.22■□□□□ 0.35
LINC00854-213ENST00000608223 GPRC5AQ8NFJ5 357 aa17.22■□□□□ 0.35
LINC00854-213ENST00000608223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC00854-213ENST00000608223 EDC3Q96F86 508 aaKnown RBP17.22■□□□□ 0.35
LINC00854-213ENST00000608223 FEZ1Q99689 392 aa17.22■□□□□ 0.35
LINC00854-213ENST00000608223 HTATIP2Q9BUP3 242 aa17.22■□□□□ 0.35
LINC00854-213ENST00000608223 PCDH10Q9P2E7 1040 aa17.22■□□□□ 0.35
LINC00854-213ENST00000608223 RBPJLQ9UBG7 517 aa17.22■□□□□ 0.35
LINC00854-213ENST00000608223 ZNF532Q9HCE3 1301 aa17.21■□□□□ 0.35
LINC00854-213ENST00000608223 RAB11FIP3O75154 756 aa17.21■□□□□ 0.35
LINC00854-213ENST00000608223 HMGCRP04035 888 aa17.21■□□□□ 0.35
LINC00854-213ENST00000608223 CYP2B6P20813 491 aa17.21■□□□□ 0.35
LINC00854-213ENST00000608223 PAGR1Q9BTK6 254 aa17.21■□□□□ 0.35
LINC00854-213ENST00000608223 CRNKL1Q9BZJ0 848 aaKnown RBP17.21■□□□□ 0.35
LINC00854-213ENST00000608223 CABP5Q9NP86 173 aa17.21■□□□□ 0.35
LINC00854-213ENST00000608223 PAK6Q9NQU5 681 aaPredicted RBP17.21■□□□□ 0.35
LINC00854-213ENST00000608223 SHMT1P34896 483 aa17.2■□□□□ 0.34
LINC00854-213ENST00000608223 EVX2Q03828 476 aa17.2■□□□□ 0.34
LINC00854-213ENST00000608223 TRIM32Q13049 653 aa17.2■□□□□ 0.34
LINC00854-213ENST00000608223 Q3C1V9 767 aa17.2■□□□□ 0.34
LINC00854-213ENST00000608223 CCAR1Q8IX12 1150 aaKnown RBP17.2■□□□□ 0.34
LINC00854-213ENST00000608223 SDR42E1Q8WUS8 393 aa17.2■□□□□ 0.34
LINC00854-213ENST00000608223 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.2■□□□□ 0.34
LINC00854-213ENST00000608223 BOLA2Q9H3K6 86 aa17.2■□□□□ 0.34
LINC00854-213ENST00000608223 CHMP4BQ9H444 224 aaKnown RBP17.2■□□□□ 0.34
LINC00854-213ENST00000608223 MCM9Q9NXL9 1143 aa17.2■□□□□ 0.34
LINC00854-213ENST00000608223 TCRBV5S4A2TA0A5A2 114 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms