RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 KCNQ5Q9NR82 932 aa14.35□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 PSDA5PKW4 1024 aaPredicted RBP14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 PSMD14O00487 310 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 RASA1P20936 1047 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 CDK8P49336 464 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 PLCD1P51178 756 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 CCT2P78371 535 aaKnown RBP14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 NTRK3Q16288 839 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 RTN1Q16799 776 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 ATL3Q6DD88 541 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 CIAPIN1Q6FI81 312 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 METTL16Q86W50 562 aaKnown RBP14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 TMEM87AQ8NBN3 555 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 NEDD1Q8NHV4 660 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 NKX2-3Q8TAU0 364 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 MXD3Q9BW11 206 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 SERPINB13Q9UIV8 391 aa14.34□□□□□ -0.11
NEDD8-MDP1-203ENST00000604306 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 JAK2O60674 1132 aa14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 TSPY3P0CV98 308 aa14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 TSPY8P0CW00 308 aa14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 TROAPQ12815 778 aa14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 CFAP100Q494V2 611 aa14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 MICU3Q86XE3 530 aa14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FAM177A1Q8N128 213 aaPredicted RBP14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FANCBQ8NB91 859 aa14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 CCDC17Q96LX7 622 aa14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 NCOA5Q9HCD5 579 aaKnown RBP14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 DDX4Q9NQI0 724 aaKnown RBP14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 TMOD2Q9NZR1 351 aa14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 RBM27Q9P2N5 1060 aaKnown RBP14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 NAP1L2Q9ULW6 460 aaPredicted RBP14.33□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FZD9O00144 591 aa14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 PRDM1O75626 825 aa14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FMNL1O95466 1100 aaPredicted RBP14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FDPSP14324 419 aaKnown RBP14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 TFAP4Q01664 338 aa14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 NBR1Q14596 966 aa14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 RCSD1Q6JBY9 416 aa14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 TRIM22Q8IYM9 498 aa14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 DPF2Q92785 391 aa14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 ZBED3Q96IU2 234 aaPredicted RBP14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 RNF26Q9BY78 433 aaPredicted RBP14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 SENP2Q9HC62 589 aa14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FAM217BQ9NTX9 383 aaPredicted RBP14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 ORC3Q9UBD5 711 aaPredicted RBP14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 PI4KBQ9UBF8 816 aa14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 BCS1LQ9Y276 419 aa14.32□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 ATAD5Q96QE3 1844 aa14.31□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 VPS37CA5D8V6 355 aaPredicted RBP14.31□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 H3BQV1 296 aa14.31□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 KIF5BP33176 963 aa14.31□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 ZNF280AP59817 542 aaPredicted RBP14.31□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 CXCL9Q07325 125 aa14.31□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 IFFO2Q5TF58 517 aa14.31□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FOXP4Q8IVH2 680 aaPredicted RBP14.31□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 ZKSCAN3Q9BRR0 538 aa14.31□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 SAP30BPQ9UHR5 308 aaKnown RBP14.31□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 SMIM22K7EJ46 135 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 DEXIO95424 95 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 CDC27P30260 824 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 GNAQP50148 359 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 RBM5P52756 815 aaKnown RBP eCLIP14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 SSRP1Q08945 709 aaKnown RBP14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 DLGAP5Q15398 846 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 CDC37L1Q7L3B6 337 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FAM83AQ86UY5 434 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 KLHL34Q8N239 644 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FBXO18Q8NFZ0 1043 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 CTCFLQ8NI51 663 aaPredicted RBP14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 DYNLL2Q96FJ2 89 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 LZTS2Q9BRK4 669 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 KAT14Q9H8E8 782 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 PPP1R1BQ9UD71 204 aaPredicted RBP14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FAM198AQ9UFP1 575 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 HERC5Q9UII4 1024 aaKnown RBP14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 SYNPO2Q9UMS6 1093 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 ELP1O95163 1332 aa14.3□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 IGKV6D-41A0A0C4DH26 115 aa14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 MYO1BO43795 1136 aa14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 RAD17O75943 681 aa14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 SMARCA1P28370 1054 aa14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 ADD1P35611 737 aaKnown RBP14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 EIF6P56537 245 aaKnown RBP14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 EVX2Q03828 476 aa14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 PICALMQ13492 652 aa14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 FAM47AQ5JRC9 791 aa14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 BRAPQ7Z569 592 aa14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 DDX11Q96FC9 970 aa14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 C8orf76Q96K31 380 aa14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 IL17RBQ9NRM6 502 aa14.29□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 PRPF3O43395 683 aaKnown RBP14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 MBD3O95983 291 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 TOP1P11387 765 aaKnown RBP14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 KRT85P78386 507 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 NFIAQ12857 509 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 RESTQ13127 1097 aa14.28□□□□□ -0.12
NEDD8-MDP1-203ENST00000604306 GRM4Q14833 912 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms