RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 IQUBQ8NA54 791 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 VTI1AQ96AJ9 217 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 I3L4J1 428 aa9.65□□□□□ -0.87
CSMD1-216ENST00000602557 ZC4H2Q9NQZ6 224 aa9.65□□□□□ -0.87
CSMD1-216ENST00000602557 SLC4A7Q9Y6M7 1214 aa9.65□□□□□ -0.87
CSMD1-216ENST00000602557 CWF19L2Q2TBE0 894 aaKnown RBP9.65□□□□□ -0.87
CSMD1-216ENST00000602557 CEBPAP49715 358 aaPredicted RBP9.65□□□□□ -0.87
CSMD1-216ENST00000602557 CCDC14Q49A88 953 aa9.65□□□□□ -0.87
CSMD1-216ENST00000602557 KCNV2Q8TDN2 545 aa9.65□□□□□ -0.87
CSMD1-216ENST00000602557 USP26Q9BXU7 913 aa9.65□□□□□ -0.87
CSMD1-216ENST00000602557 PDHA1P08559 390 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 MX2P20592 715 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 CALCOCO2Q13137 446 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 DTHD1Q6ZMT9 781 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 DHX32Q7L7V1 743 aaKnown RBP9.64□□□□□ -0.87
CSMD1-216ENST00000602557 TTF2Q9UNY4 1162 aaKnown RBP9.64□□□□□ -0.87
CSMD1-216ENST00000602557 KIF1CO43896 1103 aaKnown RBP9.64□□□□□ -0.87
CSMD1-216ENST00000602557 PPFIA2O75334 1257 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 PDCD7Q8N8D1 485 aaKnown RBP9.64□□□□□ -0.87
CSMD1-216ENST00000602557 CNGA1P29973 690 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 ZNF174Q15697 407 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 HELBQ8NG08 1087 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-216ENST00000602557 CEP70Q8NHQ1 597 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 PALMDQ9NP74 551 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 RGS16O15492 202 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-216ENST00000602557 GNA11P29992 359 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 NIP7Q9Y221 180 aaKnown RBP eCLIP9.64□□□□□ -0.87
CSMD1-216ENST00000602557 DUOX2Q9NRD8 1548 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 ZKSCAN3Q9BRR0 538 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 TRAF5O00463 557 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 ZMYND10O75800 440 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 MSANTD4Q8NCY6 345 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 TERF2Q15554 542 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 TAOK1Q7L7X3 1001 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 VPS16Q9H269 839 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 MAP3K5Q99683 1374 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 ADKP55263 362 aaKnown RBP9.64□□□□□ -0.87
CSMD1-216ENST00000602557 PROCA1Q8NCQ7 364 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-216ENST00000602557 CHAMP1Q96JM3 812 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 NOX5Q96PH1 765 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 TRIM35Q9UPQ4 493 aa9.64□□□□□ -0.87
CSMD1-216ENST00000602557 PARP1P09874 1014 aaKnown RBP9.63□□□□□ -0.87
CSMD1-216ENST00000602557 HARSP12081 509 aaKnown RBP9.63□□□□□ -0.87
CSMD1-216ENST00000602557 FBXO38Q6PIJ6 1188 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 DDX41Q9UJV9 622 aaKnown RBP9.63□□□□□ -0.87
CSMD1-216ENST00000602557 PRAG1Q86YV5 1406 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 CHMP2AO43633 222 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 RNF40O75150 1001 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 XPO4Q9C0E2 1151 aaKnown RBP9.63□□□□□ -0.87
CSMD1-216ENST00000602557 PLCB1Q9NQ66 1216 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 PARD3Q8TEW0 1356 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 MYO10Q9HD67 2058 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 SH3BP5O60239 455 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 CHMLP26374 656 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 INF2Q27J81 1249 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 TADA2BQ86TJ2 420 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 GPT2Q8TD30 523 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 C14orf93Q9H972 538 aaKnown RBP9.63□□□□□ -0.87
CSMD1-216ENST00000602557 SCOCQ9UIL1 159 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 LAMC3Q9Y6N6 1575 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 SPOPO43791 374 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 LARSQ9P2J5 1176 aaKnown RBP9.63□□□□□ -0.87
CSMD1-216ENST00000602557 ZRANB1Q9UGI0 708 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 EIF3CLB5ME19 914 aaKnown RBP9.63□□□□□ -0.87
CSMD1-216ENST00000602557 RASA3Q14644 834 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 EIF3CQ99613 913 aaKnown RBP9.63□□□□□ -0.87
CSMD1-216ENST00000602557 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-216ENST00000602557 CEP104O60308 925 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 GMNNO75496 209 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 CRCPO75575 148 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 PLCG2P16885 1265 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 NRBP1Q9UHY1 535 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 ZNF711Q9Y462 761 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 ZMYM4Q5VZL5 1548 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 BAZ2BQ9UIF8 2168 aaKnown RBP9.63□□□□□ -0.87
CSMD1-216ENST00000602557 EPB41P11171 864 aaKnown RBP9.63□□□□□ -0.87
CSMD1-216ENST00000602557 GOLGA8FQ08AF8 430 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 GOLGA8DPQ0D2H9 430 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 BIRC3Q13489 604 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 MTUS1Q9ULD2 1270 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 NUB1Q9Y5A7 615 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 SERPINB6P35237 376 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 CLCN6P51797 869 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 CLUL1Q15846 466 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 USP6NLQ92738 828 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 GRM1Q13255 1194 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 CFAP61Q8NHU2 1237 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 VCX3AQ9NNX9 186 aa9.63□□□□□ -0.87
CSMD1-216ENST00000602557 EFCAB8A8MWE9 144 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 BACH1O14867 736 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 PNMA6AP0CW24 399 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 DYDC2Q96IM9 177 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 MAPK8IP1Q9UQF2 711 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 PTPROQ16827 1216 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 LEO1Q8WVC0 666 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 TRIM6Q9C030 488 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 ATG3Q9NT62 314 aa9.62□□□□□ -0.87
CSMD1-216ENST00000602557 CCNT1O60563 726 aaKnown RBP9.62□□□□□ -0.87
CSMD1-216ENST00000602557 SNX16P57768 344 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms