RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-205ENST00000601194 USP17L5A8MUK1 530 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 USP17L12C9JPN9 530 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 USP17L21D6R901 530 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 GPR25O00155 361 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 GNAT2P19087 354 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 C12orf60Q5U649 245 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 GIMAP6Q6P9H5 292 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 ZNF280CQ8ND82 737 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 TBC1D2Q9BYX2 928 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 TAOK2Q9UL54 1235 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 ATAD5Q96QE3 1844 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 TRIM6-TRIM34B2RNG4 842 aa17.13■□□□□ 0.33
PSMC4-205ENST00000601194 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
PSMC4-205ENST00000601194 CTR9Q6PD62 1173 aa17.13■□□□□ 0.33
PSMC4-205ENST00000601194 ANKRD23Q86SG2 305 aa17.13■□□□□ 0.33
PSMC4-205ENST00000601194 SLC44A5Q8NCS7 719 aa17.13■□□□□ 0.33
PSMC4-205ENST00000601194 ZNF296Q8WUU4 475 aaPredicted RBP17.13■□□□□ 0.33
PSMC4-205ENST00000601194 EPB41L4AQ9HCS5 686 aaPredicted RBP17.13■□□□□ 0.33
PSMC4-205ENST00000601194 BAZ2AQ9UIF9 1905 aaKnown RBP17.12■□□□□ 0.33
PSMC4-205ENST00000601194 CASP8AP2Q9UKL3 1982 aa17.12■□□□□ 0.33
PSMC4-205ENST00000601194 GH2P01242 217 aa17.12■□□□□ 0.33
PSMC4-205ENST00000601194 SPP2Q13103 211 aa17.12■□□□□ 0.33
PSMC4-205ENST00000601194 TAF1CQ15572 869 aaPredicted RBP17.12■□□□□ 0.33
PSMC4-205ENST00000601194 CERKLQ49MI3 558 aaPredicted RBP17.12■□□□□ 0.33
PSMC4-205ENST00000601194 GPAT2Q6NUI2 795 aa17.12■□□□□ 0.33
PSMC4-205ENST00000601194 FASTKD5Q7L8L6 764 aaKnown RBP17.12■□□□□ 0.33
PSMC4-205ENST00000601194 AMOTL1Q8IY63 956 aa17.12■□□□□ 0.33
PSMC4-205ENST00000601194 DYNLL2Q96FJ2 89 aa17.12■□□□□ 0.33
PSMC4-205ENST00000601194 WDR18Q9BV38 432 aa17.12■□□□□ 0.33
PSMC4-205ENST00000601194 ARPP21Q9UBL0 812 aaPredicted RBP17.12■□□□□ 0.33
PSMC4-205ENST00000601194 SWAP70Q9UH65 585 aa17.12■□□□□ 0.33
PSMC4-205ENST00000601194 PATL2C9JE40 543 aaKnown RBP17.11■□□□□ 0.33
PSMC4-205ENST00000601194 ABCB5Q2M3G0 1257 aa17.11■□□□□ 0.33
PSMC4-205ENST00000601194 SBK1Q52WX2 424 aa17.11■□□□□ 0.33
PSMC4-205ENST00000601194 TNS4Q8IZW8 715 aa17.11■□□□□ 0.33
PSMC4-205ENST00000601194 RILPL2Q969X0 211 aa17.11■□□□□ 0.33
PSMC4-205ENST00000601194 FAM227BQ96M60 508 aa17.11■□□□□ 0.33
PSMC4-205ENST00000601194 AS3MTQ9HBK9 375 aa17.11■□□□□ 0.33
PSMC4-205ENST00000601194 ZFYVE28Q9HCC9 887 aa17.11■□□□□ 0.33
PSMC4-205ENST00000601194 PTPRFP10586 1907 aa17.11■□□□□ 0.33
PSMC4-205ENST00000601194 A0A0D9SFI3 127 aa17.1■□□□□ 0.33
PSMC4-205ENST00000601194 PDHXO00330 501 aa17.1■□□□□ 0.33
PSMC4-205ENST00000601194 FOXP2O15409 715 aa17.1■□□□□ 0.33
PSMC4-205ENST00000601194 GADL1Q6ZQY3 521 aa17.1■□□□□ 0.33
PSMC4-205ENST00000601194 CCDC129Q6ZRS4 1044 aa17.1■□□□□ 0.33
PSMC4-205ENST00000601194 C16orf86Q6ZW13 317 aa17.1■□□□□ 0.33
PSMC4-205ENST00000601194 HELLSQ9NRZ9 838 aa17.1■□□□□ 0.33
PSMC4-205ENST00000601194 FKTNO75072 461 aa17.09■□□□□ 0.33
PSMC4-205ENST00000601194 APPP05067 770 aa17.09■□□□□ 0.33
PSMC4-205ENST00000601194 TDO2P48775 406 aa17.09■□□□□ 0.33
PSMC4-205ENST00000601194 CDK8P49336 464 aa17.09■□□□□ 0.33
PSMC4-205ENST00000601194 HMGCS2P54868 508 aa17.09■□□□□ 0.33
PSMC4-205ENST00000601194 BACE1P56817 501 aa17.09■□□□□ 0.33
PSMC4-205ENST00000601194 MTMR2Q13614 643 aa17.09■□□□□ 0.33
PSMC4-205ENST00000601194 SH3D19Q5HYK7 790 aa17.09■□□□□ 0.33
PSMC4-205ENST00000601194 IFNL3Q8IZI9 196 aa17.09■□□□□ 0.33
PSMC4-205ENST00000601194 PROCA1Q8NCQ7 364 aaPredicted RBP17.09■□□□□ 0.33
PSMC4-205ENST00000601194 SLC45A1Q9Y2W3 748 aa17.09■□□□□ 0.33
PSMC4-205ENST00000601194 ROBO3Q96MS0 1386 aa17.09■□□□□ 0.33
PSMC4-205ENST00000601194 ADGRA2Q96PE1 1338 aa17.08■□□□□ 0.32
PSMC4-205ENST00000601194 TLR2O60603 784 aa17.08■□□□□ 0.32
PSMC4-205ENST00000601194 GSPT1P15170 499 aaKnown RBP17.08■□□□□ 0.32
PSMC4-205ENST00000601194 SDSP20132 328 aa17.08■□□□□ 0.32
PSMC4-205ENST00000601194 GUCY1A2P33402 732 aa17.08■□□□□ 0.32
PSMC4-205ENST00000601194 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.32
PSMC4-205ENST00000601194 DGKZQ13574 1117 aa17.08■□□□□ 0.32
PSMC4-205ENST00000601194 RAB3GAP1Q15042 981 aa17.08■□□□□ 0.32
PSMC4-205ENST00000601194 MCMDC2Q4G0Z9 681 aa17.08■□□□□ 0.32
PSMC4-205ENST00000601194 TTC22Q5TAA0 569 aa17.08■□□□□ 0.32
PSMC4-205ENST00000601194 CENPQQ7L2Z9 268 aaPredicted RBP17.08■□□□□ 0.32
PSMC4-205ENST00000601194 NACAP1Q9BZK3 213 aa17.08■□□□□ 0.32
PSMC4-205ENST00000601194 CABP5Q9NP86 173 aa17.08■□□□□ 0.32
PSMC4-205ENST00000601194 AGTPBP1Q9UPW5 1226 aa17.08■□□□□ 0.32
PSMC4-205ENST00000601194 LOC285556D6RIA3 1793 aa17.07■□□□□ 0.32
PSMC4-205ENST00000601194 MINDY4BA8MYZ0 360 aa17.07■□□□□ 0.32
PSMC4-205ENST00000601194 USP17L10C9JJH3 530 aa17.07■□□□□ 0.32
PSMC4-205ENST00000601194 SEPT2Q15019 361 aa17.07■□□□□ 0.32
PSMC4-205ENST00000601194 TREML2Q5T2D2 321 aa17.07■□□□□ 0.32
PSMC4-205ENST00000601194 VPS53Q5VIR6 699 aa17.07■□□□□ 0.32
PSMC4-205ENST00000601194 PARK7Q99497 189 aaKnown RBP17.07■□□□□ 0.32
PSMC4-205ENST00000601194 C19orf81C9J6K1 198 aa17.06■□□□□ 0.32
PSMC4-205ENST00000601194 MPHOSPH10O00566 681 aaKnown RBP17.06■□□□□ 0.32
PSMC4-205ENST00000601194 CYP2C8P10632 490 aa17.06■□□□□ 0.32
PSMC4-205ENST00000601194 AKR1B1P15121 316 aa17.06■□□□□ 0.32
PSMC4-205ENST00000601194 SP3Q02447 781 aa17.06■□□□□ 0.32
PSMC4-205ENST00000601194 TMEM179Q6ZVK1 233 aa17.06■□□□□ 0.32
PSMC4-205ENST00000601194 CTU1Q7Z7A3 348 aaKnown RBP17.06■□□□□ 0.32
PSMC4-205ENST00000601194 ZNF589Q86UQ0 364 aaPredicted RBP17.06■□□□□ 0.32
PSMC4-205ENST00000601194 CCDC17Q96LX7 622 aa17.06■□□□□ 0.32
PSMC4-205ENST00000601194 NAPBQ9H115 298 aa17.06■□□□□ 0.32
PSMC4-205ENST00000601194 HTTP42858 3142 aa17.06■□□□□ 0.32
PSMC4-205ENST00000601194 CCDC171Q6TFL3 1326 aa17.05■□□□□ 0.32
PSMC4-205ENST00000601194 C17orf99Q6UX52 265 aa17.05■□□□□ 0.32
PSMC4-205ENST00000601194 ACER1Q8TDN7 264 aa17.05■□□□□ 0.32
PSMC4-205ENST00000601194 MCOLN1Q9GZU1 580 aa17.05■□□□□ 0.32
PSMC4-205ENST00000601194 KIAA1683Q9H0B3 1180 aa17.05■□□□□ 0.32
PSMC4-205ENST00000601194 DIAPH3Q9NSV4 1193 aa17.05■□□□□ 0.32
PSMC4-205ENST00000601194 TMOD4Q9NZQ9 345 aa17.05■□□□□ 0.32
PSMC4-205ENST00000601194 HIP1O00291 1037 aa17.04■□□□□ 0.32
PSMC4-205ENST00000601194 NEFLP07196 543 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms