RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 NOL9Q5SY16 702 aaKnown RBP14.98□□□□□ -0.01
CHMP2A-206ENST00000600118 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.98□□□□□ -0.01
CHMP2A-206ENST00000600118 ARMC9Q7Z3E5 817 aa14.98□□□□□ -0.01
CHMP2A-206ENST00000600118 WRNIP1Q96S55 665 aa14.98□□□□□ -0.01
CHMP2A-206ENST00000600118 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.98□□□□□ -0.01
CHMP2A-206ENST00000600118 CNNM2Q9H8M5 875 aa14.98□□□□□ -0.01
CHMP2A-206ENST00000600118 MKNK2Q9HBH9 465 aa14.98□□□□□ -0.01
CHMP2A-206ENST00000600118 PAPPA2Q9BXP8 1791 aa14.98□□□□□ -0.01
CHMP2A-206ENST00000600118 AKR1B1P15121 316 aa14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 RBM25P49756 843 aaKnown RBP14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 COL9A3Q14050 684 aaPredicted RBP14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 KRT32Q14532 448 aa14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 SHROOM1Q2M3G4 852 aaPredicted RBP14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 ADCK5Q3MIX3 580 aa14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 ZNF444Q8N0Y2 327 aaPredicted RBP14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 C2orf69Q8N8R5 385 aa14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 C22orf23Q9BZE7 217 aa14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 KRT23Q9C075 422 aa14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 GINM1Q9NU53 330 aa14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 PLIN4Q96Q06 1357 aa14.97□□□□□ -0.01
CHMP2A-206ENST00000600118 IGKV6D-41A0A0C4DH26 115 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 B4E1Z4 1266 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 UBE2Q2LH0YL09 131 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 GDF11O95390 407 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 GUCY1A2P33402 732 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 VGLL4Q14135 290 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 TTLL12Q14166 644 aaPredicted RBP14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 ABCB5Q2M3G0 1257 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 MB21D2Q8IYB1 491 aaPredicted RBP14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 ANKRD13AQ8IZ07 590 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 SCYL3Q8IZE3 742 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 NEDD1Q8NHV4 660 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 NCOA7Q8NI08 942 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 ESR2Q92731 530 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 ZKSCAN4Q969J2 545 aaPredicted RBP14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 TBC1D32Q96NH3 1257 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 UPF2Q9HAU5 1272 aaKnown RBP14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 ZBTB21Q9ULJ3 1066 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 SNCAIPQ9Y6H5 919 aa14.96□□□□□ -0.01
CHMP2A-206ENST00000600118 RANBP6O60518 1105 aaKnown RBP14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 KDM4AO75164 1064 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 GH2P01242 217 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 ASNSP08243 561 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 TFAP4Q01664 338 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 TRDNQ13061 729 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 FAM47AQ5JRC9 791 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 RRP12Q5JTH9 1297 aaKnown RBP14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 TMEM179Q6ZVK1 233 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 NEK1Q96PY6 1258 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 TM6SF1Q9BZW5 370 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 TOMM22Q9NS69 142 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 TCP11L1Q9NUJ3 509 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 ZSWIM5Q9P217 1185 aa14.95□□□□□ -0.02
CHMP2A-206ENST00000600118 TSPY2A6NKD2 308 aa14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 TMEM88BA6NKF7 163 aa14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 NOVP48745 357 aa14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 ANTXR2P58335 489 aa14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 CYB5R4Q7L1T6 521 aa14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 RALYLQ86SE5 291 aaKnown RBP14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 SAPCD2Q86UD0 394 aa14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 CLMNQ96JQ2 1002 aa14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 JAKMIP1Q96N16 626 aaKnown RBP14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 KIF2CQ99661 725 aa14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 IL17RBQ9NRM6 502 aa14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 TLL2Q9Y6L7 1015 aa14.94□□□□□ -0.02
CHMP2A-206ENST00000600118 TSPY3P0CV98 308 aa14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 TSPY8P0CW00 308 aa14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 PTPRAP18433 802 aa14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 PSMA5P28066 241 aa14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 APLP1P51693 650 aa14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 EXOSC10Q01780 885 aaKnown RBP14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 SEPT2Q15019 361 aa14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 SIAH1Q8IUQ4 282 aa14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 ZSWIM6Q9HCJ5 1215 aa14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 CABP5Q9NP86 173 aa14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 CSADQ9Y600 493 aa14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 TRPM7Q96QT4 1865 aa14.93□□□□□ -0.02
CHMP2A-206ENST00000600118 SPDYE5A6NIY4 337 aa14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 MPHOSPH10O00566 681 aaKnown RBP14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 HMGB1P09429 215 aaKnown RBP14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 HUNKP57058 714 aa14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 DHX32Q7L7V1 743 aaKnown RBP14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 ANKS1AQ92625 1134 aa14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 CEP95Q96GE4 821 aa14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 HHIPL1Q96JK4 782 aa14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 MTA3Q9BTC8 594 aa14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 KANSL2Q9H9L4 492 aa14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 PICK1Q9NRD5 415 aa14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 MTMR4Q9NYA4 1195 aa14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 GREB1LQ9C091 1923 aaPredicted RBP14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 WDR19Q8NEZ3 1342 aa14.92□□□□□ -0.02
CHMP2A-206ENST00000600118 USP17L5A8MUK1 530 aa14.91□□□□□ -0.02
CHMP2A-206ENST00000600118 NMT2O60551 498 aa14.91□□□□□ -0.02
CHMP2A-206ENST00000600118 RPS6KB1P23443 525 aa14.91□□□□□ -0.02
CHMP2A-206ENST00000600118 MCM5P33992 734 aa14.91□□□□□ -0.02
CHMP2A-206ENST00000600118 RAB3GAP1Q15042 981 aa14.91□□□□□ -0.02
CHMP2A-206ENST00000600118 RCSD1Q6JBY9 416 aa14.91□□□□□ -0.02
CHMP2A-206ENST00000600118 CCDC84Q86UT8 332 aaPredicted RBP14.91□□□□□ -0.02
CHMP2A-206ENST00000600118 ERO1BQ86YB8 467 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms