RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 G2E3Q7L622 706 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 TMTC1Q8IUR5 882 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
SCN8A-208ENST00000599343 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 GUCY2FP51841 1108 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 POSTNQ15063 836 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 TNNI3KQ59H18 835 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 HERC4Q5GLZ8 1057 aaPredicted RBP13.14□□□□□ -0.31
SCN8A-208ENST00000599343 CDC37L1Q7L3B6 337 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 MYCT1Q8N699 235 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 BAIAP2L1Q9UHR4 511 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 FPGT-TNNI3KV9GXZ4 949 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 RPS6KA1Q15418 735 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 FNBP4Q8N3X1 1017 aaPredicted RBP13.14□□□□□ -0.31
SCN8A-208ENST00000599343 MLKLQ8NB16 471 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 FAM89AQ96GI7 184 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 RILPQ96NA2 401 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 KCNJ14Q9UNX9 436 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 EXOC7Q9UPT5 735 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 hCG_1642624A0A1W2PR95 340 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 GCNT3O95395 438 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 ZNF853P0CG23 659 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 ARHGAP25P42331 645 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 LRMPQ12912 555 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 ARHGAP44Q17R89 818 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 PEX26Q7Z412 305 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 ZNF594Q96JF6 807 aaPredicted RBP13.13□□□□□ -0.31
SCN8A-208ENST00000599343 PHACTR3Q96KR7 559 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 IMPACTQ9P2X3 320 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 NDUFB9Q9Y6M9 179 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 IQGAP2Q13576 1575 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 ITGA6P23229 1130 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 PNOCQ13519 176 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 CFAP221Q4G0U5 840 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 SFMBT2Q5VUG0 894 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 DBNDD2Q9BQY9 259 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 ANGEL1Q9UNK9 670 aaKnown RBP13.13□□□□□ -0.31
SCN8A-208ENST00000599343 KRT19P08727 400 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 ADKP55263 362 aaKnown RBP13.13□□□□□ -0.31
SCN8A-208ENST00000599343 KRT71Q3SY84 523 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 USH1GQ495M9 461 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 BSPRYQ5W0U4 402 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 DENND2CQ68D51 928 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 KSR1Q8IVT5 923 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.13□□□□□ -0.31
SCN8A-208ENST00000599343 LRWD1Q9UFC0 647 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 PLCH2O75038 1416 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 IL2RBP14784 551 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 ARHGAP24Q8N264 748 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 PLCB1Q9NQ66 1216 aa13.13□□□□□ -0.31
SCN8A-208ENST00000599343 CCDC38Q502W7 563 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 RNF10Q8N5U6 811 aaKnown RBP13.12□□□□□ -0.31
SCN8A-208ENST00000599343 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 VCXQ9H320 206 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 FAM207AQ9NSI2 230 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-208ENST00000599343 ARHGAP6O43182 974 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 GPAA1O43292 621 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 EXOC3O60645 756 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 LONRF2Q1L5Z9 754 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 SH2D4BQ5SQS7 431 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 CADPS2Q86UW7 1296 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
SCN8A-208ENST00000599343 TFCP2L1Q9NZI6 479 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 UFL1O94874 794 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 PTPROQ16827 1216 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 RRAGAQ7L523 313 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
SCN8A-208ENST00000599343 C8orf37Q96NL8 207 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 NLRC4Q9NPP4 1024 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCN8A-208ENST00000599343 CCDC89Q8N998 374 aa13.12□□□□□ -0.31
SCN8A-208ENST00000599343 MRPL44Q9H9J2 332 aaKnown RBP13.12□□□□□ -0.31
SCN8A-208ENST00000599343 CD19P15391 556 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 CABP7Q86V35 215 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 EYA3Q99504 573 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 VGLL3A8MV65 326 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 JAK2O60674 1132 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 MTMR3Q13615 1198 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 SYCE1Q8N0S2 351 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 ADCY7P51828 1080 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 CUL4BQ13620 913 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 PHLDB2Q86SQ0 1253 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 RBM17Q96I25 401 aaKnown RBP13.11□□□□□ -0.31
SCN8A-208ENST00000599343 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 ZBTB7BO15156 539 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-208ENST00000599343 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
SCN8A-208ENST00000599343 GABPB1Q06547 395 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-208ENST00000599343 PPFIA1Q13136 1202 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 CALCRLQ16602 461 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 GJA3Q9Y6H8 435 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 MAP7Q14244 749 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 ANKRD20A3Q5VUR7 823 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 RDH13Q8NBN7 331 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 TSC1Q92574 1164 aa13.11□□□□□ -0.31
SCN8A-208ENST00000599343 IFIH1Q9BYX4 1025 aaKnown RBP13.11□□□□□ -0.31
SCN8A-208ENST00000599343 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
SCN8A-208ENST00000599343 FLOT1O75955 427 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 KRT40Q6A162 431 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 LSM14BQ9BX40 385 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms