RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 MRE11P49959 708 aa16.31■□□□□ 0.2
IRF3-218ENST00000597369 HERVK_113P62684 666 aa16.31■□□□□ 0.2
IRF3-218ENST00000597369 ERVK-9P63128 1117 aa16.31■□□□□ 0.2
IRF3-218ENST00000597369 ERVK-24P63145 666 aa16.31■□□□□ 0.2
IRF3-218ENST00000597369 IRX3P78415 501 aaPredicted RBP16.31■□□□□ 0.2
IRF3-218ENST00000597369 VGLL2Q8N8G2 317 aa16.31■□□□□ 0.2
IRF3-218ENST00000597369 PORCNQ9H237 461 aa16.31■□□□□ 0.2
IRF3-218ENST00000597369 C11orf16Q9NQ32 467 aa16.31■□□□□ 0.2
IRF3-218ENST00000597369 FLRT1Q9NZU1 646 aa16.31■□□□□ 0.2
IRF3-218ENST00000597369 KBTBD13C9JR72 458 aa16.3■□□□□ 0.2
IRF3-218ENST00000597369 KIAA0355O15063 1070 aa16.3■□□□□ 0.2
IRF3-218ENST00000597369 PEX10O60683 326 aa16.3■□□□□ 0.2
IRF3-218ENST00000597369 CNGA1P29973 690 aa16.3■□□□□ 0.2
IRF3-218ENST00000597369 FKBP5Q13451 457 aaPredicted RBP16.3■□□□□ 0.2
IRF3-218ENST00000597369 CCAR1Q8IX12 1150 aaKnown RBP16.3■□□□□ 0.2
IRF3-218ENST00000597369 WDFY4Q6ZS81 3184 aa16.3■□□□□ 0.2
IRF3-218ENST00000597369 IGHA2P01877 340 aa16.29■□□□□ 0.2
IRF3-218ENST00000597369 HOXC6P09630 235 aa16.29■□□□□ 0.2
IRF3-218ENST00000597369 PRDX5P30044 214 aa16.29■□□□□ 0.2
IRF3-218ENST00000597369 TLE2Q04725 743 aa16.29■□□□□ 0.2
IRF3-218ENST00000597369 FPGSQ05932 587 aa16.29■□□□□ 0.2
IRF3-218ENST00000597369 BEND3Q5T5X7 828 aa16.29■□□□□ 0.2
IRF3-218ENST00000597369 GTF3C2Q8WUA4 911 aaPredicted RBP16.29■□□□□ 0.2
IRF3-218ENST00000597369 PBX4Q9BYU1 374 aa16.29■□□□□ 0.2
IRF3-218ENST00000597369 USP17L5A8MUK1 530 aa16.28■□□□□ 0.2
IRF3-218ENST00000597369 GRM8O00222 908 aa16.28■□□□□ 0.2
IRF3-218ENST00000597369 CENPBP07199 599 aaPredicted RBP16.28■□□□□ 0.2
IRF3-218ENST00000597369 CLTBP09497 229 aa16.28■□□□□ 0.2
IRF3-218ENST00000597369 METTL24Q5JXM2 366 aa16.28■□□□□ 0.2
IRF3-218ENST00000597369 YTHDC1Q96MU7 727 aaKnown RBP16.28■□□□□ 0.2
IRF3-218ENST00000597369 PRKRIP1Q9H875 184 aaPredicted RBP16.28■□□□□ 0.2
IRF3-218ENST00000597369 AS3MTQ9HBK9 375 aa16.28■□□□□ 0.2
IRF3-218ENST00000597369 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.2
IRF3-218ENST00000597369 LDHBP07195 334 aaKnown RBP16.27■□□□□ 0.2
IRF3-218ENST00000597369 RAG1P15918 1043 aa16.27■□□□□ 0.2
IRF3-218ENST00000597369 IGFBP4P22692 258 aa16.27■□□□□ 0.2
IRF3-218ENST00000597369 CAP2P40123 477 aa16.27■□□□□ 0.2
IRF3-218ENST00000597369 BACE1P56817 501 aa16.27■□□□□ 0.2
IRF3-218ENST00000597369 ATP2B2Q01814 1243 aa16.27■□□□□ 0.2
IRF3-218ENST00000597369 TRPV1Q8NER1 839 aa16.27■□□□□ 0.2
IRF3-218ENST00000597369 WDR18Q9BV38 432 aa16.27■□□□□ 0.2
IRF3-218ENST00000597369 ADAMTS8Q9UP79 889 aa16.27■□□□□ 0.2
IRF3-218ENST00000597369 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
IRF3-218ENST00000597369 SLC15A5A6NIM6 579 aa16.26■□□□□ 0.19
IRF3-218ENST00000597369 IFIT1P09914 478 aaKnown RBP16.26■□□□□ 0.19
IRF3-218ENST00000597369 CYBAP13498 195 aa16.26■□□□□ 0.19
IRF3-218ENST00000597369 FGFR2P21802 821 aa16.26■□□□□ 0.19
IRF3-218ENST00000597369 PBX2P40425 430 aa16.26■□□□□ 0.19
IRF3-218ENST00000597369 ADCYAP1R1P41586 468 aa16.26■□□□□ 0.19
IRF3-218ENST00000597369 TFF2Q03403 129 aa16.26■□□□□ 0.19
IRF3-218ENST00000597369 RALBP1Q15311 655 aa16.26■□□□□ 0.19
IRF3-218ENST00000597369 LRRC24Q50LG9 513 aa16.26■□□□□ 0.19
IRF3-218ENST00000597369 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.26■□□□□ 0.19
IRF3-218ENST00000597369 DDX4Q9NQI0 724 aaKnown RBP16.26■□□□□ 0.19
IRF3-218ENST00000597369 USP34Q70CQ2 3546 aa16.25■□□□□ 0.19
IRF3-218ENST00000597369 GAKO14976 1311 aa16.25■□□□□ 0.19
IRF3-218ENST00000597369 ERC2O15083 957 aa16.25■□□□□ 0.19
IRF3-218ENST00000597369 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
IRF3-218ENST00000597369 KCNQ1P51787 676 aa16.25■□□□□ 0.19
IRF3-218ENST00000597369 WDR43Q15061 677 aaKnown RBP eCLIP16.25■□□□□ 0.19
IRF3-218ENST00000597369 TWISTNBQ3B726 338 aaPredicted RBP16.25■□□□□ 0.19
IRF3-218ENST00000597369 RASIP1Q5U651 963 aa16.25■□□□□ 0.19
IRF3-218ENST00000597369 TMOD4Q9NZQ9 345 aa16.25■□□□□ 0.19
IRF3-218ENST00000597369 SMCHD1A6NHR9 2005 aa16.24■□□□□ 0.19
IRF3-218ENST00000597369 C19orf81C9J6K1 198 aa16.24■□□□□ 0.19
IRF3-218ENST00000597369 SMIM22K7EJ46 135 aa16.24■□□□□ 0.19
IRF3-218ENST00000597369 PTPREP23469 700 aa16.24■□□□□ 0.19
IRF3-218ENST00000597369 CYP2C19P33261 490 aa16.24■□□□□ 0.19
IRF3-218ENST00000597369 PUM3Q15397 648 aaKnown RBP16.24■□□□□ 0.19
IRF3-218ENST00000597369 CCDC129Q6ZRS4 1044 aa16.24■□□□□ 0.19
IRF3-218ENST00000597369 FAM163AQ96GL9 167 aaPredicted RBP16.24■□□□□ 0.19
IRF3-218ENST00000597369 KAZALD1Q96I82 304 aa16.24■□□□□ 0.19
IRF3-218ENST00000597369 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.24■□□□□ 0.196e-9■■□□□ 11.9
IRF3-218ENST00000597369 PRRC2BQ5JSZ5 2229 aaKnown RBP16.24■□□□□ 0.19
IRF3-218ENST00000597369 PI4K2BG5E9Z4 385 aa16.23■□□□□ 0.19
IRF3-218ENST00000597369 SEPT4O43236 478 aa16.23■□□□□ 0.19
IRF3-218ENST00000597369 MTMR2Q13614 643 aa16.23■□□□□ 0.19
IRF3-218ENST00000597369 LRRC41Q15345 812 aa16.23■□□□□ 0.19
IRF3-218ENST00000597369 HERVK_113Q902F9 699 aa16.23■□□□□ 0.19
IRF3-218ENST00000597369 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
IRF3-218ENST00000597369 CWC22Q9HCG8 908 aaKnown RBP16.23■□□□□ 0.19
IRF3-218ENST00000597369 C9orf78Q9NZ63 289 aaPredicted RBP16.23■□□□□ 0.19
IRF3-218ENST00000597369 RABGAP1Q9Y3P9 1069 aa16.23■□□□□ 0.19
IRF3-218ENST00000597369 GBF1Q92538 1859 aa16.22■□□□□ 0.19
IRF3-218ENST00000597369 GRXCR1A8MXD5 290 aa16.22■□□□□ 0.19
IRF3-218ENST00000597369 CCNA1P78396 465 aa16.22■□□□□ 0.19
IRF3-218ENST00000597369 PICALMQ13492 652 aa16.22■□□□□ 0.19
IRF3-218ENST00000597369 GRB14Q14449 540 aa16.22■□□□□ 0.19
IRF3-218ENST00000597369 RRP1BQ14684 758 aaKnown RBP16.22■□□□□ 0.19
IRF3-218ENST00000597369 RAB30Q15771 203 aa16.22■□□□□ 0.19
IRF3-218ENST00000597369 NPLOC4Q8TAT6 608 aa16.22■□□□□ 0.19
IRF3-218ENST00000597369 TOX2Q96NM4 488 aa16.22■□□□□ 0.19
IRF3-218ENST00000597369 PAGR1Q9BTK6 254 aa16.22■□□□□ 0.19
IRF3-218ENST00000597369 TMEM39AQ9NV64 488 aa16.22■□□□□ 0.19
IRF3-218ENST00000597369 PHF24Q9UPV7 400 aa16.22■□□□□ 0.19
IRF3-218ENST00000597369 FAM196BA6NMK8 535 aa16.21■□□□□ 0.19
IRF3-218ENST00000597369 PRR33A8MZF0 331 aa16.21■□□□□ 0.19
IRF3-218ENST00000597369 ZBTB22O15209 634 aa16.21■□□□□ 0.19
IRF3-218ENST00000597369 TLL1O43897 1013 aa16.21■□□□□ 0.19
IRF3-218ENST00000597369 TMEM240Q5SV17 173 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms