RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 WDR18Q9BV38 432 aa19.44■□□□□ 0.7
USHBP1-206ENST00000596436 MORF4L1Q9UBU8 362 aa19.44■□□□□ 0.7
USHBP1-206ENST00000596436 GJD2Q9UKL4 321 aa19.44■□□□□ 0.7
USHBP1-206ENST00000596436 MYO5AQ9Y4I1 1855 aaKnown RBP19.43■□□□□ 0.7
USHBP1-206ENST00000596436 A0A1W2PPC1 479 aa19.43■□□□□ 0.7
USHBP1-206ENST00000596436 HMGCS2P54868 508 aa19.43■□□□□ 0.7
USHBP1-206ENST00000596436 PABPC4Q13310 644 aaKnown RBP eCLIP19.43■□□□□ 0.7
USHBP1-206ENST00000596436 TEX11Q8IYF3 940 aa19.43■□□□□ 0.7
USHBP1-206ENST00000596436 ASCC2Q9H1I8 757 aaPredicted RBP19.43■□□□□ 0.7
USHBP1-206ENST00000596436 DCTPP1Q9H773 170 aa19.43■□□□□ 0.7
USHBP1-206ENST00000596436 RAI14Q9P0K7 980 aa19.43■□□□□ 0.7
USHBP1-206ENST00000596436 IGSF3O75054 1194 aa19.42■□□□□ 0.7
USHBP1-206ENST00000596436 PPP4CP60510 307 aa19.42■□□□□ 0.7
USHBP1-206ENST00000596436 IRX6P78412 446 aaPredicted RBP19.42■□□□□ 0.7
USHBP1-206ENST00000596436 TTC39AQ5SRH9 613 aa19.42■□□□□ 0.7
USHBP1-206ENST00000596436 SH3RF3Q8TEJ3 882 aaPredicted RBP19.42■□□□□ 0.7
USHBP1-206ENST00000596436 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.42■□□□□ 0.7
USHBP1-206ENST00000596436 DHX36Q9H2U1 1008 aaKnown RBP19.42■□□□□ 0.7
USHBP1-206ENST00000596436 PI4KBQ9UBF8 816 aa19.42■□□□□ 0.7
USHBP1-206ENST00000596436 SMARCA5O60264 1052 aaPredicted RBP19.41■□□□□ 0.7
USHBP1-206ENST00000596436 TFRCP02786 760 aaKnown RBP19.41■□□□□ 0.7
USHBP1-206ENST00000596436 HMGCRP04035 888 aa19.41■□□□□ 0.7
USHBP1-206ENST00000596436 CCDC158Q5M9N0 1113 aa19.41■□□□□ 0.7
USHBP1-206ENST00000596436 CLASRPQ8N2M8 674 aaKnown RBP19.41■□□□□ 0.7
USHBP1-206ENST00000596436 ANKLE1Q8NAG6 615 aa19.41■□□□□ 0.7
USHBP1-206ENST00000596436 DNAJC18Q9H819 358 aa19.41■□□□□ 0.7
USHBP1-206ENST00000596436 COL6A3P12111 3177 aa19.4■□□□□ 0.7
USHBP1-206ENST00000596436 HOXA7P31268 230 aaPredicted RBP19.4■□□□□ 0.7
USHBP1-206ENST00000596436 JAG1P78504 1218 aa19.4■□□□□ 0.7
USHBP1-206ENST00000596436 ZNF512BQ96KM6 892 aaPredicted RBP19.4■□□□□ 0.7
USHBP1-206ENST00000596436 LRRCC1Q9C099 1032 aa19.4■□□□□ 0.7
USHBP1-206ENST00000596436 BCL11AQ9H165 835 aa19.4■□□□□ 0.7
USHBP1-206ENST00000596436 AS3MTQ9HBK9 375 aa19.4■□□□□ 0.7
USHBP1-206ENST00000596436 SNRKQ9NRH2 765 aa19.4■□□□□ 0.7
USHBP1-206ENST00000596436 LRP2BPQ9P2M1 347 aa19.4■□□□□ 0.7
USHBP1-206ENST00000596436 EVI5O60447 810 aa19.39■□□□□ 0.69
USHBP1-206ENST00000596436 ASNSP08243 561 aa19.39■□□□□ 0.69
USHBP1-206ENST00000596436 PLCG2P16885 1265 aa19.39■□□□□ 0.69
USHBP1-206ENST00000596436 MNX1P50219 401 aaPredicted RBP19.39■□□□□ 0.69
USHBP1-206ENST00000596436 BACE1P56817 501 aa19.39■□□□□ 0.69
USHBP1-206ENST00000596436 ADGRA1Q86SQ6 560 aa19.39■□□□□ 0.69
USHBP1-206ENST00000596436 PAWRQ96IZ0 340 aaKnown RBP19.39■□□□□ 0.69
USHBP1-206ENST00000596436 GINM1Q9NU53 330 aa19.39■□□□□ 0.69
USHBP1-206ENST00000596436 BAG3O95817 575 aa19.38■□□□□ 0.69
USHBP1-206ENST00000596436 CYP2E1P05181 493 aaPredicted RBP19.38■□□□□ 0.69
USHBP1-206ENST00000596436 FLT1P17948 1338 aa19.38■□□□□ 0.69
USHBP1-206ENST00000596436 MAP3K21Q5TCX8 1036 aa19.38■□□□□ 0.69
USHBP1-206ENST00000596436 NAA16Q6N069 864 aaPredicted RBP19.38■□□□□ 0.69
USHBP1-206ENST00000596436 NECAB2Q7Z6G3 386 aa19.38■□□□□ 0.69
USHBP1-206ENST00000596436 RPTORQ8N122 1335 aa19.38■□□□□ 0.69
USHBP1-206ENST00000596436 DIS3LQ8TF46 1054 aaKnown RBP19.38■□□□□ 0.69
USHBP1-206ENST00000596436 AATFQ9NY61 560 aaKnown RBP eCLIP19.38■□□□□ 0.69
USHBP1-206ENST00000596436 DDX60LQ5H9U9 1706 aaKnown RBP19.37■□□□□ 0.69
USHBP1-206ENST00000596436 ZAP70P43403 619 aa19.37■□□□□ 0.69
USHBP1-206ENST00000596436 HDAC1Q13547 482 aaPredicted RBP19.37■□□□□ 0.69
USHBP1-206ENST00000596436 MTMR2Q13614 643 aa19.37■□□□□ 0.69
USHBP1-206ENST00000596436 AAMPQ13685 434 aa19.37■□□□□ 0.69
USHBP1-206ENST00000596436 FOXP4Q8IVH2 680 aaPredicted RBP19.37■□□□□ 0.69
USHBP1-206ENST00000596436 NOL10Q9BSC4 688 aaKnown RBP19.37■□□□□ 0.69
USHBP1-206ENST00000596436 TAOK2Q9UL54 1235 aa19.37■□□□□ 0.69
USHBP1-206ENST00000596436 NDUFB9Q9Y6M9 179 aa19.37■□□□□ 0.69
USHBP1-206ENST00000596436 C19orf81C9J6K1 198 aa19.36■□□□□ 0.69
USHBP1-206ENST00000596436 IFIT2P09913 472 aaKnown RBP19.36■□□□□ 0.69
USHBP1-206ENST00000596436 XRCC5P13010 732 aaKnown RBP19.36■□□□□ 0.69
USHBP1-206ENST00000596436 TRIM32Q13049 653 aa19.36■□□□□ 0.69
USHBP1-206ENST00000596436 TRIB2Q92519 343 aa19.36■□□□□ 0.69
USHBP1-206ENST00000596436 HMX1Q9NP08 348 aaPredicted RBP19.36■□□□□ 0.69
USHBP1-206ENST00000596436 HERVK_113P62684 666 aa19.35■□□□□ 0.69
USHBP1-206ENST00000596436 SHROOM1Q2M3G4 852 aaPredicted RBP19.35■□□□□ 0.69
USHBP1-206ENST00000596436 MAPKAPK5Q8IW41 473 aa19.35■□□□□ 0.69
USHBP1-206ENST00000596436 TGFBRAP1Q8WUH2 860 aa19.35■□□□□ 0.69
USHBP1-206ENST00000596436 USP6NLQ92738 828 aa19.35■□□□□ 0.69
USHBP1-206ENST00000596436 P2RX7Q99572 595 aaKnown RBP19.35■□□□□ 0.69
USHBP1-206ENST00000596436 GDF15Q99988 308 aa19.35■□□□□ 0.69
USHBP1-206ENST00000596436 TXNRD2Q9NNW7 524 aa19.35■□□□□ 0.69
USHBP1-206ENST00000596436 PIH1D3Q9NQM4 214 aaKnown RBP19.35■□□□□ 0.69
USHBP1-206ENST00000596436 OGDHLQ9ULD0 1010 aa19.35■□□□□ 0.69
USHBP1-206ENST00000596436 USP17L10C9JJH3 530 aa19.34■□□□□ 0.69
USHBP1-206ENST00000596436 BMP8BP34820 402 aa19.34■□□□□ 0.69
USHBP1-206ENST00000596436 IRX3P78415 501 aaPredicted RBP19.34■□□□□ 0.69
USHBP1-206ENST00000596436 POTEEQ6S8J3 1075 aa19.34■□□□□ 0.69
USHBP1-206ENST00000596436 SOCS4Q8WXH5 440 aa19.34■□□□□ 0.69
USHBP1-206ENST00000596436 TMOD4Q9NZQ9 345 aa19.34■□□□□ 0.69
USHBP1-206ENST00000596436 RBPJLQ9UBG7 517 aa19.34■□□□□ 0.69
USHBP1-206ENST00000596436 PALD1Q9ULE6 856 aa19.34■□□□□ 0.69
USHBP1-206ENST00000596436 ZBTB21Q9ULJ3 1066 aa19.34■□□□□ 0.69
USHBP1-206ENST00000596436 SOX1O00570 391 aaPredicted RBP19.33■□□□□ 0.68
USHBP1-206ENST00000596436 GPRC5AQ8NFJ5 357 aa19.33■□□□□ 0.68
USHBP1-206ENST00000596436 NBPF3Q9H094 633 aa19.33■□□□□ 0.68
USHBP1-206ENST00000596436 ANTXR1Q9H6X2 564 aa19.33■□□□□ 0.68
USHBP1-206ENST00000596436 STAP2Q9UGK3 403 aa19.33■□□□□ 0.68
USHBP1-206ENST00000596436 DNAH12Q6ZR08 3092 aa19.33■□□□□ 0.68
USHBP1-206ENST00000596436 MYH1P12882 1939 aa19.32■□□□□ 0.68
USHBP1-206ENST00000596436 PEX10O60683 326 aa19.32■□□□□ 0.68
USHBP1-206ENST00000596436 IGHDP01880 384 aa19.32■□□□□ 0.68
USHBP1-206ENST00000596436 C12orf42Q96LP6 360 aa19.32■□□□□ 0.68
USHBP1-206ENST00000596436 EMILIN3Q9NT22 766 aa19.32■□□□□ 0.68
USHBP1-206ENST00000596436 A0A0C4DFX4 3053 aa19.31■□□□□ 0.68
USHBP1-206ENST00000596436 GDF11O95390 407 aa19.31■□□□□ 0.68
USHBP1-206ENST00000596436 MAPK4P31152 587 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms