RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PNPLA7Q6ZV29 1317 aa15.11■□□□□ 0.01
VRK3-209ENST00000594948 FGFR2P21802 821 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 TXLNAP40222 546 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 PBX1P40424 430 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 SPATA1Q5VX52 437 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 CADPS2Q86UW7 1296 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 NLRP10Q86W26 655 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 HNRNPLLQ8WVV9 542 aaKnown RBP15.1■□□□□ 0.01
VRK3-209ENST00000594948 LPIN2Q92539 896 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 CTAGE1Q96RT6 745 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 GREM2Q9H772 168 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 EPB41L4AQ9HCS5 686 aaPredicted RBP15.1■□□□□ 0.01
VRK3-209ENST00000594948 AATFQ9NY61 560 aaKnown RBP eCLIP15.1■□□□□ 0.01
VRK3-209ENST00000594948 WWC3Q9ULE0 1092 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 BMP15O95972 392 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 ADKP55263 362 aaKnown RBP15.1■□□□□ 0.01
VRK3-209ENST00000594948 MAP3K12Q12852 859 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 GPS2Q13227 327 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 WTAPQ15007 396 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 PUM3Q15397 648 aaKnown RBP15.1■□□□□ 0.01
VRK3-209ENST00000594948 MFSD6Q6ZSS7 791 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 TOM1L2Q6ZVM7 507 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 APTXQ7Z2E3 356 aaKnown RBP15.1■□□□□ 0.01
VRK3-209ENST00000594948 CRACR2BQ8N4Y2 399 aaPredicted RBP15.1■□□□□ 0.01
VRK3-209ENST00000594948 DDX17Q92841 729 aaKnown RBP15.1■□□□□ 0.01
VRK3-209ENST00000594948 PSD3Q9NYI0 1048 aa15.1■□□□□ 0.01
VRK3-209ENST00000594948 ITIH6Q6UXX5 1313 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 PDE8AO60658 829 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 SEC31AO94979 1220 aaKnown RBP15.09■□□□□ 0.01
VRK3-209ENST00000594948 PHKA1P46020 1223 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 SMC1AQ14683 1233 aaKnown RBP15.09■□□□□ 0.01
VRK3-209ENST00000594948 MUM1L1Q5H9M0 696 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 SRGAP1Q7Z6B7 1085 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 SH3RF1Q7Z6J0 888 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 CEP112Q8N8E3 955 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 AK7Q96M32 723 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 CCDC85AQ96PX6 553 aaPredicted RBP15.09■□□□□ 0.01
VRK3-209ENST00000594948 MED15Q96RN5 788 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 MYL10Q9BUA6 226 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 FUT8Q9BYC5 575 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 PARD6BQ9BYG5 372 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 ADGRG1Q9Y653 693 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 LAMB2P55268 1798 aa15.09■□□□□ 0.01
VRK3-209ENST00000594948 SASH3O75995 380 aa15.08■□□□□ 0.01
VRK3-209ENST00000594948 STARD3NLO95772 234 aa15.08■□□□□ 0.01
VRK3-209ENST00000594948 OAS2P29728 719 aaKnown RBP15.08■□□□□ 0.01
VRK3-209ENST00000594948 GRIN1Q05586 938 aa15.08■□□□□ 0.01
VRK3-209ENST00000594948 CDKAL1Q5VV42 579 aa15.08■□□□□ 0.01
VRK3-209ENST00000594948 PPFIBP1Q86W92 1011 aa15.08■□□□□ 0.01
VRK3-209ENST00000594948 CCDC12Q8WUD4 166 aaPredicted RBP15.08■□□□□ 0.01
VRK3-209ENST00000594948 DHX58Q96C10 678 aa15.08■□□□□ 0.01
VRK3-209ENST00000594948 RNF26Q9BY78 433 aaPredicted RBP15.08■□□□□ 0.01
VRK3-209ENST00000594948 NACAP1Q9BZK3 213 aa15.08■□□□□ 0.01
VRK3-209ENST00000594948 RNF41Q9H4P4 317 aaPredicted RBP15.08■□□□□ 0.01
VRK3-209ENST00000594948 STRN4Q9NRL3 753 aa15.08■□□□□ 0.01
VRK3-209ENST00000594948 TMOD3Q9NYL9 352 aa15.08■□□□□ 0.01
VRK3-209ENST00000594948 RTL9Q8NET4 1388 aa15.08■□□□□ 0
VRK3-209ENST00000594948 ERICH2A1L162 156 aa15.08■□□□□ 0
VRK3-209ENST00000594948 ERICH4A6NGS2 130 aa15.08■□□□□ 0
VRK3-209ENST00000594948 GSG1L2A8MUP6 293 aa15.08■□□□□ 0
VRK3-209ENST00000594948 TULP2O00295 520 aa15.08■□□□□ 0
VRK3-209ENST00000594948 GUCY1A2P33402 732 aa15.08■□□□□ 0
VRK3-209ENST00000594948 USP5P45974 858 aa15.08■□□□□ 0
VRK3-209ENST00000594948 CUL4BQ13620 913 aa15.08■□□□□ 0
VRK3-209ENST00000594948 FILIP1LQ4L180 1135 aa15.08■□□□□ 0
VRK3-209ENST00000594948 RASGRP2Q7LDG7 609 aa15.08■□□□□ 0
VRK3-209ENST00000594948 FAM177A1Q8N128 213 aaPredicted RBP15.08■□□□□ 0
VRK3-209ENST00000594948 SPATA5Q8NB90 893 aa15.08■□□□□ 0
VRK3-209ENST00000594948 MSANTD4Q8NCY6 345 aa15.08■□□□□ 0
VRK3-209ENST00000594948 GSDMAQ96QA5 445 aa15.08■□□□□ 0
VRK3-209ENST00000594948 TSPYL1Q9H0U9 437 aa15.08■□□□□ 0
VRK3-209ENST00000594948 SAMSN1Q9NSI8 373 aaKnown RBP15.08■□□□□ 0
VRK3-209ENST00000594948 CDC23Q9UJX2 597 aa15.08■□□□□ 0
VRK3-209ENST00000594948 RAB21Q9UL25 225 aa15.08■□□□□ 0
VRK3-209ENST00000594948 KCNJ14Q9UNX9 436 aa15.08■□□□□ 0
VRK3-209ENST00000594948 PCDHB6Q9Y5E3 794 aa15.08■□□□□ 0
VRK3-209ENST00000594948 SYNRGQ9UMZ2 1314 aa15.07■□□□□ 0
VRK3-209ENST00000594948 IRS4O14654 1257 aaPredicted RBP15.07■□□□□ 0
VRK3-209ENST00000594948 MAP2K7O14733 419 aa15.07■□□□□ 0
VRK3-209ENST00000594948 KIF5CO60282 957 aa15.07■□□□□ 0
VRK3-209ENST00000594948 MBD4O95243 580 aa15.07■□□□□ 0
VRK3-209ENST00000594948 TUBBP07437 444 aa15.07■□□□□ 0
VRK3-209ENST00000594948 SLC5A1P13866 664 aa15.07■□□□□ 0
VRK3-209ENST00000594948 XBP1P17861 261 aa15.07■□□□□ 0
VRK3-209ENST00000594948 CTDSPL2Q05D32 466 aa15.07■□□□□ 0
VRK3-209ENST00000594948 SPECC1Q5M775 1068 aa15.07■□□□□ 0
VRK3-209ENST00000594948 TRMT44Q8IYL2 757 aaKnown RBP15.07■□□□□ 0
VRK3-209ENST00000594948 FERMT2Q96AC1 680 aa15.07■□□□□ 0
VRK3-209ENST00000594948 CSRNP2Q9H175 543 aa15.07■□□□□ 0
VRK3-209ENST00000594948 MRPL44Q9H9J2 332 aaKnown RBP15.07■□□□□ 0
VRK3-209ENST00000594948 ADD3Q9UEY8 706 aaKnown RBP15.07■□□□□ 0
VRK3-209ENST00000594948 TACC3Q9Y6A5 838 aa15.07■□□□□ 0
VRK3-209ENST00000594948 XIRP1Q702N8 1843 aaKnown RBP15.07■□□□□ 0
VRK3-209ENST00000594948 MFAP3LO75121 409 aa15.06■□□□□ 0
VRK3-209ENST00000594948 CNGA4Q8IV77 575 aa15.06■□□□□ 0
VRK3-209ENST00000594948 DNAJC10Q8IXB1 793 aa15.06■□□□□ 0
VRK3-209ENST00000594948 IGSF22Q8N9C0 903 aa15.06■□□□□ 0
VRK3-209ENST00000594948 EXOC4Q96A65 974 aa15.06■□□□□ 0
VRK3-209ENST00000594948 MYO1AQ9UBC5 1043 aa15.06■□□□□ 0
VRK3-209ENST00000594948 TTF2Q9UNY4 1162 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms