RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 CCL5P13501 91 aa19.53■□□□□ 0.72
CIRBP-240ENST00000592815 UBXN2AP68543 259 aa19.53■□□□□ 0.72
CIRBP-240ENST00000592815 FAM110CQ1W6H9 321 aa19.53■□□□□ 0.72
CIRBP-240ENST00000592815 SLC9C2Q5TAH2 1124 aa19.53■□□□□ 0.72
CIRBP-240ENST00000592815 C20orf194Q5TEA3 1177 aa19.53■□□□□ 0.72
CIRBP-240ENST00000592815 SLAIN1Q8ND83 568 aa19.53■□□□□ 0.72
CIRBP-240ENST00000592815 COA7Q96BR5 231 aa19.53■□□□□ 0.72
CIRBP-240ENST00000592815 DNAJC2Q99543 621 aaKnown RBP19.53■□□□□ 0.72
CIRBP-240ENST00000592815 RNF208Q9H0X6 261 aa19.53■□□□□ 0.72
CIRBP-240ENST00000592815 MYO5AQ9Y4I1 1855 aaKnown RBP19.53■□□□□ 0.72
CIRBP-240ENST00000592815 MAST2Q6P0Q8 1798 aa19.52■□□□□ 0.72
CIRBP-240ENST00000592815 BRCA2P51587 3418 aa19.52■□□□□ 0.72
CIRBP-240ENST00000592815 MAGEB6P1A0A0J9YX57 407 aa19.52■□□□□ 0.72
CIRBP-240ENST00000592815 C19orf81C9J6K1 198 aa19.52■□□□□ 0.72
CIRBP-240ENST00000592815 USP17L10C9JJH3 530 aa19.52■□□□□ 0.72
CIRBP-240ENST00000592815 PDE6AP16499 860 aa19.52■□□□□ 0.72
CIRBP-240ENST00000592815 TTC6Q86TZ1 520 aa19.52■□□□□ 0.72
CIRBP-240ENST00000592815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.52■□□□□ 0.72
CIRBP-240ENST00000592815 RIOK1Q9BRS2 568 aaKnown RBP19.52■□□□□ 0.72
CIRBP-240ENST00000592815 TAOK2Q9UL54 1235 aa19.52■□□□□ 0.72
CIRBP-240ENST00000592815 GH2P01242 217 aa19.51■□□□□ 0.71
CIRBP-240ENST00000592815 ELNP15502 786 aa19.51■□□□□ 0.71
CIRBP-240ENST00000592815 IRX3P78415 501 aaPredicted RBP19.51■□□□□ 0.71
CIRBP-240ENST00000592815 PDE3AQ14432 1141 aa19.51■□□□□ 0.71
CIRBP-240ENST00000592815 TATDN1Q6P1N9 297 aa19.51■□□□□ 0.71
CIRBP-240ENST00000592815 NKX2-3Q8TAU0 364 aa19.51■□□□□ 0.71
CIRBP-240ENST00000592815 P2RX7Q99572 595 aaKnown RBP19.51■□□□□ 0.71
CIRBP-240ENST00000592815 SERPINB13Q9UIV8 391 aa19.51■□□□□ 0.71
CIRBP-240ENST00000592815 RBBP6Q7Z6E9 1792 aaKnown RBP19.51■□□□□ 0.71
CIRBP-240ENST00000592815 PTPRFP10586 1907 aa19.51■□□□□ 0.71
CIRBP-240ENST00000592815 POLR3DP05423 398 aaPredicted RBP19.5■□□□□ 0.71
CIRBP-240ENST00000592815 GJB1P08034 283 aa19.5■□□□□ 0.71
CIRBP-240ENST00000592815 HOXA7P31268 230 aaPredicted RBP19.5■□□□□ 0.71
CIRBP-240ENST00000592815 IRF5Q13568 498 aa19.5■□□□□ 0.71
CIRBP-240ENST00000592815 PXYLP1Q8TE99 480 aa19.5■□□□□ 0.71
CIRBP-240ENST00000592815 EDC3Q96F86 508 aaKnown RBP19.5■□□□□ 0.71
CIRBP-240ENST00000592815 EHD4Q9H223 541 aa19.5■□□□□ 0.71
CIRBP-240ENST00000592815 ZNF532Q9HCE3 1301 aa19.5■□□□□ 0.71
CIRBP-240ENST00000592815 SIPA1L1O43166 1804 aa19.49■□□□□ 0.71
CIRBP-240ENST00000592815 GJA8P48165 433 aa19.49■□□□□ 0.71
CIRBP-240ENST00000592815 PLCD1P51178 756 aa19.49■□□□□ 0.71
CIRBP-240ENST00000592815 SHISA4Q96DD7 197 aa19.49■□□□□ 0.71
CIRBP-240ENST00000592815 CRNKL1Q9BZJ0 848 aaKnown RBP19.49■□□□□ 0.71
CIRBP-240ENST00000592815 UNC93B1Q9H1C4 597 aa19.49■□□□□ 0.71
CIRBP-240ENST00000592815 BOLA2Q9H3K6 86 aa19.49■□□□□ 0.71
CIRBP-240ENST00000592815 EMILIN3Q9NT22 766 aa19.49■□□□□ 0.71
CIRBP-240ENST00000592815 INHAP05111 366 aa19.48■□□□□ 0.71
CIRBP-240ENST00000592815 ATP5JP18859 108 aa19.48■□□□□ 0.71
CIRBP-240ENST00000592815 RAB3GAP1Q15042 981 aa19.48■□□□□ 0.71
CIRBP-240ENST00000592815 CERKLQ49MI3 558 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-240ENST00000592815 USP17L2Q6R6M4 530 aa19.48■□□□□ 0.71
CIRBP-240ENST00000592815 PAG1Q9NWQ8 432 aa19.48■□□□□ 0.71
CIRBP-240ENST00000592815 MORF4L1Q9UBU8 362 aa19.48■□□□□ 0.71
CIRBP-240ENST00000592815 TCRBV5S4A2TA0A5A2 114 aa19.47■□□□□ 0.71
CIRBP-240ENST00000592815 PEX10O60683 326 aa19.47■□□□□ 0.71
CIRBP-240ENST00000592815 HERVK_113P62684 666 aa19.47■□□□□ 0.71
CIRBP-240ENST00000592815 ABCB5Q2M3G0 1257 aa19.47■□□□□ 0.71
CIRBP-240ENST00000592815 GCC1Q96CN9 775 aa19.47■□□□□ 0.71
CIRBP-240ENST00000592815 MCM9Q9NXL9 1143 aa19.47■□□□□ 0.71
CIRBP-240ENST00000592815 ATAD5Q96QE3 1844 aa19.46■□□□□ 0.71
CIRBP-240ENST00000592815 CDK5RAP2Q96SN8 1893 aa19.46■□□□□ 0.71
CIRBP-240ENST00000592815 SHMT1P34896 483 aa19.46■□□□□ 0.71
CIRBP-240ENST00000592815 ZYXQ15942 572 aaKnown RBP19.46■□□□□ 0.71
CIRBP-240ENST00000592815 LCORLQ8N3X6 602 aa19.46■□□□□ 0.71
CIRBP-240ENST00000592815 GPRC5AQ8NFJ5 357 aa19.46■□□□□ 0.71
CIRBP-240ENST00000592815 U2AF1L4Q8WU68 220 aaKnown RBP19.46■□□□□ 0.71
CIRBP-240ENST00000592815 FEZ1Q99689 392 aa19.46■□□□□ 0.71
CIRBP-240ENST00000592815 LRRCC1Q9C099 1032 aa19.46■□□□□ 0.71
CIRBP-240ENST00000592815 TXNRD2Q9NNW7 524 aa19.46■□□□□ 0.71
CIRBP-240ENST00000592815 CABP5Q9NP86 173 aa19.46■□□□□ 0.71
CIRBP-240ENST00000592815 GJD2Q9UKL4 321 aa19.46■□□□□ 0.71
CIRBP-240ENST00000592815 SMARCA5O60264 1052 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-240ENST00000592815 SGPL1O95470 568 aa19.45■□□□□ 0.7
CIRBP-240ENST00000592815 SLFNL1Q499Z3 407 aa19.45■□□□□ 0.7
CIRBP-240ENST00000592815 SDR42E1Q8WUS8 393 aa19.45■□□□□ 0.7
CIRBP-240ENST00000592815 HAUS7Q99871 368 aa19.45■□□□□ 0.7
CIRBP-240ENST00000592815 ARMT1Q9H993 441 aa19.45■□□□□ 0.7
CIRBP-240ENST00000592815 RBPJLQ9UBG7 517 aa19.45■□□□□ 0.7
CIRBP-240ENST00000592815 FOCADQ5VW36 1801 aa19.45■□□□□ 0.7
CIRBP-240ENST00000592815 MGAMO43451 1857 aa19.45■□□□□ 0.7
CIRBP-240ENST00000592815 LOC285556D6RIA3 1793 aa19.44■□□□□ 0.7
CIRBP-240ENST00000592815 TFRCP02786 760 aaKnown RBP19.44■□□□□ 0.7
CIRBP-240ENST00000592815 ADD2P35612 726 aa19.44■□□□□ 0.7
CIRBP-240ENST00000592815 EVX2Q03828 476 aa19.44■□□□□ 0.7
CIRBP-240ENST00000592815 ACER1Q8TDN7 264 aa19.44■□□□□ 0.7
CIRBP-240ENST00000592815 DPF3Q92784 378 aa19.44■□□□□ 0.7
CIRBP-240ENST00000592815 DEFB118Q96PH6 123 aa19.44■□□□□ 0.7
CIRBP-240ENST00000592815 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.44■□□□□ 0.77e-7■■■■□ 24
CIRBP-240ENST00000592815 DCP1AQ9NPI6 582 aaPredicted RBP19.44■□□□□ 0.7
CIRBP-240ENST00000592815 USP17L15C9J2P7 530 aa19.43■□□□□ 0.7
CIRBP-240ENST00000592815 USP17L13C9JLJ4 530 aa19.43■□□□□ 0.7
CIRBP-240ENST00000592815 USP17L11C9JVI0 530 aa19.43■□□□□ 0.7
CIRBP-240ENST00000592815 USP17L18D6R9N7 530 aa19.43■□□□□ 0.7
CIRBP-240ENST00000592815 USP17L22D6RA61 530 aa19.43■□□□□ 0.7
CIRBP-240ENST00000592815 USP17L17D6RBQ6 530 aa19.43■□□□□ 0.7
CIRBP-240ENST00000592815 USP17L19D6RCP7 530 aa19.43■□□□□ 0.7
CIRBP-240ENST00000592815 USP17L20D6RJB6 530 aa19.43■□□□□ 0.7
CIRBP-240ENST00000592815 PRKAB2O43741 272 aa19.43■□□□□ 0.7
CIRBP-240ENST00000592815 CYP2D6P10635 497 aa19.43■□□□□ 0.7
CIRBP-240ENST00000592815 USP14P54578 494 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms