RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 GIMAP6Q6P9H5 292 aa14.23□□□□□ -0.13
H3F3B-212ENST00000592643 TTC6Q86TZ1 520 aa14.23□□□□□ -0.13
H3F3B-212ENST00000592643 TICAM2Q86XR7 235 aa14.23□□□□□ -0.13
H3F3B-212ENST00000592643 IFNL3Q8IZI9 196 aa14.23□□□□□ -0.13
H3F3B-212ENST00000592643 HELLSQ9NRZ9 838 aa14.23□□□□□ -0.13
H3F3B-212ENST00000592643 ZBTB21Q9ULJ3 1066 aa14.23□□□□□ -0.13
H3F3B-212ENST00000592643 AK9Q5TCS8 1911 aa14.23□□□□□ -0.13
H3F3B-212ENST00000592643 PHIPQ8WWQ0 1821 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 MYH1P12882 1939 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 CCL15-CCL14A0A0B4J2E2 113 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 BTBD19C9JJ37 291 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 TBC1D8O95759 1140 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 GH2P01242 217 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 GTF2A2P52657 109 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 CAP1Q01518 475 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 CCL15Q16663 113 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 SIAH1Q8IUQ4 282 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 REM2Q8IYK8 340 aaPredicted RBP14.22□□□□□ -0.13
H3F3B-212ENST00000592643 CRACR2BQ8N4Y2 399 aaPredicted RBP14.22□□□□□ -0.13
H3F3B-212ENST00000592643 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.22□□□□□ -0.13
H3F3B-212ENST00000592643 CFHR5Q9BXR6 569 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 SAGE1Q9NXZ1 904 aa14.22□□□□□ -0.13
H3F3B-212ENST00000592643 DOCK1Q14185 1865 aa14.21□□□□□ -0.13
H3F3B-212ENST00000592643 HTTP42858 3142 aa14.21□□□□□ -0.13
H3F3B-212ENST00000592643 A0A0G2JLL6 359 aaPredicted RBP14.21□□□□□ -0.13
H3F3B-212ENST00000592643 CXCL11O14625 94 aa14.21□□□□□ -0.13
H3F3B-212ENST00000592643 CTCFP49711 727 aaPredicted RBP14.21□□□□□ -0.13
H3F3B-212ENST00000592643 INHBEP58166 350 aa14.21□□□□□ -0.13
H3F3B-212ENST00000592643 SREBF2Q12772 1141 aa14.21□□□□□ -0.13
H3F3B-212ENST00000592643 SNAPC2Q13487 334 aa14.21□□□□□ -0.13
H3F3B-212ENST00000592643 LRRFIP1Q32MZ4 808 aaKnown RBP14.21□□□□□ -0.13
H3F3B-212ENST00000592643 MCMDC2Q4G0Z9 681 aa14.21□□□□□ -0.13
H3F3B-212ENST00000592643 COL13A1Q5TAT6 717 aaPredicted RBP14.21□□□□□ -0.13
H3F3B-212ENST00000592643 C16orf86Q6ZW13 317 aa14.21□□□□□ -0.13
H3F3B-212ENST00000592643 PRRT2Q7Z6L0 340 aaPredicted RBP14.21□□□□□ -0.13
H3F3B-212ENST00000592643 NKX2-3Q8TAU0 364 aa14.21□□□□□ -0.13
H3F3B-212ENST00000592643 CCDC136Q96JN2 1154 aa14.21□□□□□ -0.13
H3F3B-212ENST00000592643 PICK1Q9NRD5 415 aa14.21□□□□□ -0.13
H3F3B-212ENST00000592643 BAZ2AQ9UIF9 1905 aaKnown RBP14.21□□□□□ -0.14
H3F3B-212ENST00000592643 ROBO3Q96MS0 1386 aa14.21□□□□□ -0.14
H3F3B-212ENST00000592643 TRIM75PA6NK02 468 aa14.2□□□□□ -0.14
H3F3B-212ENST00000592643 AKR1B1P15121 316 aa14.2□□□□□ -0.14
H3F3B-212ENST00000592643 GNAT2P19087 354 aa14.2□□□□□ -0.14
H3F3B-212ENST00000592643 CDK8P49336 464 aa14.2□□□□□ -0.14
H3F3B-212ENST00000592643 SPP2Q13103 211 aa14.2□□□□□ -0.14
H3F3B-212ENST00000592643 WDR18Q9BV38 432 aa14.2□□□□□ -0.14
H3F3B-212ENST00000592643 ARPP21Q9UBL0 812 aaPredicted RBP14.2□□□□□ -0.14
H3F3B-212ENST00000592643 USP17L5A8MUK1 530 aa14.19□□□□□ -0.14
H3F3B-212ENST00000592643 CA12O43570 354 aa14.19□□□□□ -0.14
H3F3B-212ENST00000592643 HSPD1P10809 573 aaKnown RBP14.19□□□□□ -0.14
H3F3B-212ENST00000592643 CETPP11597 493 aa14.19□□□□□ -0.14
H3F3B-212ENST00000592643 CRHR2Q13324 411 aa14.19□□□□□ -0.14
H3F3B-212ENST00000592643 CERKLQ49MI3 558 aaPredicted RBP14.19□□□□□ -0.14
H3F3B-212ENST00000592643 CWC27Q6UX04 472 aaKnown RBP14.19□□□□□ -0.14
H3F3B-212ENST00000592643 CLEC10AQ8IUN9 316 aa14.19□□□□□ -0.14
H3F3B-212ENST00000592643 ZNF280CQ8ND82 737 aa14.19□□□□□ -0.14
H3F3B-212ENST00000592643 ACER1Q8TDN7 264 aa14.19□□□□□ -0.14
H3F3B-212ENST00000592643 NBPF3Q9H094 633 aa14.19□□□□□ -0.14
H3F3B-212ENST00000592643 INCENPQ9NQS7 918 aa14.19□□□□□ -0.14
H3F3B-212ENST00000592643 CCDC171Q6TFL3 1326 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 ADGRA2Q96PE1 1338 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 A0A1W2PRG0 241 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 MINDY4BA8MYZ0 360 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 FGAP02671 866 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 NEFLP07196 543 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 ASNSP08243 561 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 RASA1P20936 1047 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 CHMLP26374 656 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 SEPT2Q15019 361 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 ALX1Q15699 326 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 ABCB5Q2M3G0 1257 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 SH3D19Q5HYK7 790 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 TREML2Q5T2D2 321 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 STK11IPQ8N1F8 1099 aa14.18□□□□□ -0.14
H3F3B-212ENST00000592643 APPP05067 770 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 TDO2P48775 406 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 HMGCS2P54868 508 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 KIAA1755Q5JYT7 1200 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 POTEEQ6S8J3 1075 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 ANKRD23Q86SG2 305 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 BEGAINQ9BUH8 593 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 TRIM34Q9BYJ4 488 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 PRDM10Q9NQV6 1147 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 EMILIN3Q9NT22 766 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 GINM1Q9NU53 330 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 PPP4R2Q9NY27 417 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 SWAP70Q9UH65 585 aa14.17□□□□□ -0.14
H3F3B-212ENST00000592643 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.17□□□□□ -0.14
H3F3B-212ENST00000592643 ATAD5Q96QE3 1844 aa14.16□□□□□ -0.14
H3F3B-212ENST00000592643 GPR25O00155 361 aa14.16□□□□□ -0.14
H3F3B-212ENST00000592643 PDHXO00330 501 aa14.16□□□□□ -0.14
H3F3B-212ENST00000592643 PRDM1O75626 825 aa14.16□□□□□ -0.14
H3F3B-212ENST00000592643 BACE1P56817 501 aa14.16□□□□□ -0.14
H3F3B-212ENST00000592643 PPARAQ07869 468 aa14.16□□□□□ -0.14
H3F3B-212ENST00000592643 MTMR2Q13614 643 aa14.16□□□□□ -0.14
H3F3B-212ENST00000592643 ERICH6BQ5W0A0 696 aa14.16□□□□□ -0.14
H3F3B-212ENST00000592643 ANAPC4Q9UJX5 808 aa14.16□□□□□ -0.14
H3F3B-212ENST00000592643 TAOK2Q9UL54 1235 aa14.16□□□□□ -0.14
H3F3B-212ENST00000592643 PTPRFP10586 1907 aa14.15□□□□□ -0.14
H3F3B-212ENST00000592643 IGKV6D-41A0A0C4DH26 115 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms