RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 MCOLN1Q9GZU1 580 aa17.46■□□□□ 0.39
DDX39A-217ENST00000592391 AS3MTQ9HBK9 375 aa17.46■□□□□ 0.39
DDX39A-217ENST00000592391 ZBTB21Q9ULJ3 1066 aa17.46■□□□□ 0.39
DDX39A-217ENST00000592391 PHIPQ8WWQ0 1821 aa17.46■□□□□ 0.39
DDX39A-217ENST00000592391 PDHXO00330 501 aa17.45■□□□□ 0.38
DDX39A-217ENST00000592391 EVX2Q03828 476 aa17.45■□□□□ 0.38
DDX39A-217ENST00000592391 SHROOM1Q2M3G4 852 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-217ENST00000592391 EVI5LQ96CN4 794 aa17.45■□□□□ 0.38
DDX39A-217ENST00000592391 WDR18Q9BV38 432 aa17.45■□□□□ 0.38
DDX39A-217ENST00000592391 TAOK2Q9UL54 1235 aa17.45■□□□□ 0.38
DDX39A-217ENST00000592391 ATAD5Q96QE3 1844 aa17.44■□□□□ 0.38
DDX39A-217ENST00000592391 GPAA1O43292 621 aa17.44■□□□□ 0.38
DDX39A-217ENST00000592391 TLR2O60603 784 aa17.44■□□□□ 0.38
DDX39A-217ENST00000592391 CYP2D6P10635 497 aa17.44■□□□□ 0.38
DDX39A-217ENST00000592391 SHMT1P34896 483 aa17.44■□□□□ 0.38
DDX39A-217ENST00000592391 CERKLQ49MI3 558 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-217ENST00000592391 GADL1Q6ZQY3 521 aa17.44■□□□□ 0.38
DDX39A-217ENST00000592391 AMOTL1Q8IY63 956 aa17.44■□□□□ 0.38
DDX39A-217ENST00000592391 USP17L12C9JPN9 530 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 USP17L21D6R901 530 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 M0R2C6 588 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 GH2P01242 217 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 GNAT2P19087 354 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 SP3Q02447 781 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 ZMYM1Q5SVZ6 1142 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 C12orf60Q5U649 245 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 GIMAP6Q6P9H5 292 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 PLEKHM2Q8IWE5 1019 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 ERO1AQ96HE7 468 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 ABHD8Q96I13 439 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 OSBPL3Q9H4L5 887 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 SWAP70Q9UH65 585 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 SLC45A1Q9Y2W3 748 aa17.43■□□□□ 0.38
DDX39A-217ENST00000592391 GSG1L2A8MUP6 293 aa17.42■□□□□ 0.38
DDX39A-217ENST00000592391 BACE1P56817 501 aa17.42■□□□□ 0.38
DDX39A-217ENST00000592391 PKN2Q16513 984 aaKnown RBP17.42■□□□□ 0.38
DDX39A-217ENST00000592391 ABCB5Q2M3G0 1257 aa17.42■□□□□ 0.38
DDX39A-217ENST00000592391 SH3D19Q5HYK7 790 aa17.42■□□□□ 0.38
DDX39A-217ENST00000592391 PROCA1Q8NCQ7 364 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-217ENST00000592391 PARK7Q99497 189 aaKnown RBP17.42■□□□□ 0.38
DDX39A-217ENST00000592391 ARPP21Q9UBL0 812 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-217ENST00000592391 AGTPBP1Q9UPW5 1226 aa17.42■□□□□ 0.38
DDX39A-217ENST00000592391 PTPRFP10586 1907 aa17.42■□□□□ 0.38
DDX39A-217ENST00000592391 CYP2D7A0A087X1C5 515 aa17.41■□□□□ 0.38
DDX39A-217ENST00000592391 HMGCS2P54868 508 aa17.41■□□□□ 0.38
DDX39A-217ENST00000592391 MTMR2Q13614 643 aa17.41■□□□□ 0.38
DDX39A-217ENST00000592391 CTR9Q6PD62 1173 aa17.41■□□□□ 0.38
DDX39A-217ENST00000592391 TICAM2Q86XR7 235 aa17.41■□□□□ 0.38
DDX39A-217ENST00000592391 SLC44A5Q8NCS7 719 aa17.41■□□□□ 0.38
DDX39A-217ENST00000592391 CD99L2Q8TCZ2 262 aa17.41■□□□□ 0.38
DDX39A-217ENST00000592391 DYNLL2Q96FJ2 89 aa17.41■□□□□ 0.38
DDX39A-217ENST00000592391 SEC62Q99442 399 aaKnown RBP17.41■□□□□ 0.38
DDX39A-217ENST00000592391 CABP5Q9NP86 173 aa17.41■□□□□ 0.38
DDX39A-217ENST00000592391 ADGRA2Q96PE1 1338 aa17.41■□□□□ 0.38
DDX39A-217ENST00000592391 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
DDX39A-217ENST00000592391 USP17L10C9JJH3 530 aa17.4■□□□□ 0.38
DDX39A-217ENST00000592391 CYP2C8P10632 490 aa17.4■□□□□ 0.38
DDX39A-217ENST00000592391 SBK1Q52WX2 424 aa17.4■□□□□ 0.38
DDX39A-217ENST00000592391 TREML2Q5T2D2 321 aa17.4■□□□□ 0.38
DDX39A-217ENST00000592391 C17orf99Q6UX52 265 aa17.4■□□□□ 0.38
DDX39A-217ENST00000592391 EPB41L4AQ9HCS5 686 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-217ENST00000592391 BAZ2AQ9UIF9 1905 aaKnown RBP17.39■□□□□ 0.37
DDX39A-217ENST00000592391 TRIM6-TRIM34B2RNG4 842 aa17.39■□□□□ 0.37
DDX39A-217ENST00000592391 PATL2C9JE40 543 aaKnown RBP17.39■□□□□ 0.37
DDX39A-217ENST00000592391 SMIM22K7EJ46 135 aa17.39■□□□□ 0.37
DDX39A-217ENST00000592391 RAB3GAP1Q15042 981 aa17.39■□□□□ 0.37
DDX39A-217ENST00000592391 C16orf86Q6ZW13 317 aa17.39■□□□□ 0.37
DDX39A-217ENST00000592391 OTOP1Q7RTM1 612 aa17.39■□□□□ 0.37
DDX39A-217ENST00000592391 TMOD4Q9NZQ9 345 aa17.39■□□□□ 0.37
DDX39A-217ENST00000592391 CPA4Q9UI42 421 aa17.39■□□□□ 0.37
DDX39A-217ENST00000592391 LOC285556D6RIA3 1793 aa17.38■□□□□ 0.37
DDX39A-217ENST00000592391 APPP05067 770 aa17.38■□□□□ 0.37
DDX39A-217ENST00000592391 TDO2P48775 406 aa17.38■□□□□ 0.37
DDX39A-217ENST00000592391 CDK8P49336 464 aa17.38■□□□□ 0.37
DDX39A-217ENST00000592391 PABPC4Q13310 644 aaKnown RBP eCLIP17.38■□□□□ 0.37
DDX39A-217ENST00000592391 PNMA3Q9UL41 463 aa17.38■□□□□ 0.37
DDX39A-217ENST00000592391 TRIM17Q9Y577 477 aa17.38■□□□□ 0.37
DDX39A-217ENST00000592391 MPHOSPH10O00566 681 aaKnown RBP17.37■□□□□ 0.37
DDX39A-217ENST00000592391 CAPN15O75808 1086 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 GUCY1A2P33402 732 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 LACTBP83111 547 aaPredicted RBP17.37■□□□□ 0.37
DDX39A-217ENST00000592391 CAP1Q01518 475 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 SEPT2Q15019 361 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 ARHGEF6Q15052 776 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 FBXO46Q6PJ61 603 aaPredicted RBP17.37■□□□□ 0.37
DDX39A-217ENST00000592391 TMEM179Q6ZVK1 233 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 IFNL3Q8IZI9 196 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 SMCR8Q8TEV9 937 aaPredicted RBP17.37■□□□□ 0.37
DDX39A-217ENST00000592391 RILPL2Q969X0 211 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 CCDC17Q96LX7 622 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 NACAP1Q9BZK3 213 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 EFCC1Q9HA90 598 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 HELLSQ9NRZ9 838 aa17.37■□□□□ 0.37
DDX39A-217ENST00000592391 MINDY4BA8MYZ0 360 aa17.36■□□□□ 0.37
DDX39A-217ENST00000592391 BCRP11274 1271 aa17.36■□□□□ 0.37
DDX39A-217ENST00000592391 PDE4AP27815 886 aa17.36■□□□□ 0.37
DDX39A-217ENST00000592391 KIF22Q14807 665 aa17.36■□□□□ 0.37
DDX39A-217ENST00000592391 USP17L2Q6R6M4 530 aa17.36■□□□□ 0.37
DDX39A-217ENST00000592391 CCDC129Q6ZRS4 1044 aa17.36■□□□□ 0.37
DDX39A-217ENST00000592391 FEZ1Q99689 392 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms