RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TOB1P50616 345 aaPredicted RBP18.19■□□□□ 0.5
MBD1-227ENST00000592060 SAFBQ15424 915 aaKnown RBP eCLIP18.19■□□□□ 0.5
MBD1-227ENST00000592060 CRY2Q49AN0 593 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 RESP18Q5W5W9 173 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 IQCA1Q86XH1 822 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 ANKIB1Q9P2G1 1089 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 CUTAO60888 179 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 DDAH1O94760 285 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 CYP2D6P10635 497 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 CDC25BP30305 580 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 TROAPQ12815 778 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 CATIPQ7Z7H3 387 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 DZIP1Q86YF9 867 aaKnown RBP18.19■□□□□ 0.5
MBD1-227ENST00000592060 CEP57L1Q8IYX8 460 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 CCDC82Q8N4S0 544 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 WDR66Q8TBY9 1149 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 TRIM5Q9C035 493 aa18.19■□□□□ 0.5
MBD1-227ENST00000592060 LTBP1Q14766 1721 aa18.18■□□□□ 0.5
MBD1-227ENST00000592060 GOLGA6L19H0YKK7 550 aa18.18■□□□□ 0.5
MBD1-227ENST00000592060 PKN1Q16512 942 aa18.18■□□□□ 0.5
MBD1-227ENST00000592060 RBM28Q9NW13 759 aaKnown RBP18.18■□□□□ 0.5
MBD1-227ENST00000592060 MKRN1Q9UHC7 482 aaKnown RBP18.18■□□□□ 0.5
MBD1-227ENST00000592060 DDX60LQ5H9U9 1706 aaKnown RBP18.18■□□□□ 0.5
MBD1-227ENST00000592060 SLC3A2P08195 630 aaKnown RBP18.17■□□□□ 0.5
MBD1-227ENST00000592060 CALM1P0DP23 149 aa18.17■□□□□ 0.5
MBD1-227ENST00000592060 CALM2P0DP24 149 aa18.17■□□□□ 0.5
MBD1-227ENST00000592060 CALM3P0DP25 149 aa18.17■□□□□ 0.5
MBD1-227ENST00000592060 PRPF3O43395 683 aaKnown RBP18.17■□□□□ 0.5
MBD1-227ENST00000592060 PLEKHA8P1O95397 391 aa18.17■□□□□ 0.5
MBD1-227ENST00000592060 SYKP43405 635 aa18.17■□□□□ 0.5
MBD1-227ENST00000592060 GPSM2P81274 684 aa18.17■□□□□ 0.5
MBD1-227ENST00000592060 CLIC6Q96NY7 704 aa18.17■□□□□ 0.5
MBD1-227ENST00000592060 BPIFA3Q9BQP9 254 aa18.17■□□□□ 0.5
MBD1-227ENST00000592060 SPTLC3Q9NUV7 552 aa18.17■□□□□ 0.5
MBD1-227ENST00000592060 ROBO3Q96MS0 1386 aa18.16■□□□□ 0.5
MBD1-227ENST00000592060 LDHBP07195 334 aaKnown RBP18.16■□□□□ 0.5
MBD1-227ENST00000592060 PTGS1P23219 599 aa18.16■□□□□ 0.5
MBD1-227ENST00000592060 TERF1P54274 439 aa18.16■□□□□ 0.5
MBD1-227ENST00000592060 NR5A1Q13285 461 aa18.16■□□□□ 0.5
MBD1-227ENST00000592060 DPCR1Q3MIW9 517 aa18.16■□□□□ 0.5
MBD1-227ENST00000592060 RILPL1Q5EBL4 403 aa18.16■□□□□ 0.5
MBD1-227ENST00000592060 TMTC3Q6ZXV5 915 aa18.16■□□□□ 0.5
MBD1-227ENST00000592060 ZNF804AQ7Z570 1209 aa18.16■□□□□ 0.5
MBD1-227ENST00000592060 OXER1Q8TDS5 423 aa18.16■□□□□ 0.5
MBD1-227ENST00000592060 RPGRQ92834 1020 aaKnown RBP18.16■□□□□ 0.5
MBD1-227ENST00000592060 RBM6P78332 1123 aaKnown RBP18.15■□□□□ 0.5
MBD1-227ENST00000592060 GRIK5Q16478 980 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 SLC27A3Q5K4L6 730 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 AOPEPQ8N6M6 819 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 GPR101Q96P66 508 aaPredicted RBP18.15■□□□□ 0.5
MBD1-227ENST00000592060 NAT10Q9H0A0 1025 aaKnown RBP18.15■□□□□ 0.5
MBD1-227ENST00000592060 PYCARDQ9ULZ3 195 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 CNTNAP5Q8WYK1 1306 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 NMT2O60551 498 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 SERPINB2P05120 415 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 NLRP12P59046 1061 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 ST5P78524 1137 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 NOLC1Q14978 699 aaKnown RBP eCLIP18.15■□□□□ 0.5
MBD1-227ENST00000592060 FAM47AQ5JRC9 791 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 KRI1Q8N9T8 703 aaKnown RBP18.15■□□□□ 0.5
MBD1-227ENST00000592060 KIAA1524Q8TCG1 905 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 MRFAP1L1Q96HT8 127 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 PHF20Q9BVI0 1012 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 TUBE1Q9UJT0 475 aa18.15■□□□□ 0.5
MBD1-227ENST00000592060 FBXO2Q9UK22 296 aaPredicted RBP18.15■□□□□ 0.5
MBD1-227ENST00000592060 BECN2A8MW95 431 aa18.14■□□□□ 0.49
MBD1-227ENST00000592060 USP17L8P0C7I0 530 aa18.14■□□□□ 0.49
MBD1-227ENST00000592060 AKAP17AQ02040 695 aaKnown RBP18.14■□□□□ 0.49
MBD1-227ENST00000592060 PDE4BQ07343 736 aa18.14■□□□□ 0.49
MBD1-227ENST00000592060 C17orf53Q8N3J3 647 aaPredicted RBP18.14■□□□□ 0.49
MBD1-227ENST00000592060 ANO8Q9HCE9 1232 aaPredicted RBP18.14■□□□□ 0.49
MBD1-227ENST00000592060 MCM9Q9NXL9 1143 aa18.14■□□□□ 0.49
MBD1-227ENST00000592060 MORC2Q9Y6X9 1032 aaPredicted RBP18.14■□□□□ 0.49
MBD1-227ENST00000592060 ANKRD31Q8N7Z5 1873 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 PTPREP23469 700 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 PPP4CP60510 307 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 GSTO1P78417 241 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 C12orf60Q5U649 245 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 SH3RF3Q8TEJ3 882 aaPredicted RBP18.13■□□□□ 0.49
MBD1-227ENST00000592060 VPS54Q9P1Q0 977 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 PCDHB6Q9Y5E3 794 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 TPM2P07951 284 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 ATP2B4P23634 1241 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 NT5C2P49902 561 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 DDR1Q08345 913 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 RCSD1Q6JBY9 416 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 CCDC186Q7Z3E2 898 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 FBXW7Q969H0 707 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 CLIP2Q9UDT6 1046 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 NRBP1Q9UHY1 535 aa18.13■□□□□ 0.49
MBD1-227ENST00000592060 R3HCC1Q9Y3T6 440 aaKnown RBP18.13■□□□□ 0.49
MBD1-227ENST00000592060 UFL1O94874 794 aa18.12■□□□□ 0.49
MBD1-227ENST00000592060 XBP1P17861 261 aa18.12■□□□□ 0.49
MBD1-227ENST00000592060 DIXDC1Q155Q3 683 aa18.12■□□□□ 0.49
MBD1-227ENST00000592060 RBM17Q96I25 401 aaKnown RBP18.12■□□□□ 0.49
MBD1-227ENST00000592060 KCNH3Q9ULD8 1083 aa18.12■□□□□ 0.49
MBD1-227ENST00000592060 V9GY48 417 aaPredicted RBP18.12■□□□□ 0.49
MBD1-227ENST00000592060 IL1R1P14778 569 aa18.11■□□□□ 0.49
MBD1-227ENST00000592060 HOXA10P31260 410 aaPredicted RBP18.11■□□□□ 0.49
MBD1-227ENST00000592060 KRT2P35908 639 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms