RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 DHX40Q8IX18 779 aaKnown RBP22.75■■□□□ 1.23
MBD3-209ENST00000592012 TIGD1Q96MW7 591 aa22.75■■□□□ 1.23
MBD3-209ENST00000592012 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.75■■□□□ 1.23
MBD3-209ENST00000592012 MKRN1Q9UHC7 482 aaKnown RBP22.75■■□□□ 1.23
MBD3-209ENST00000592012 SLC3A2P08195 630 aaKnown RBP22.74■■□□□ 1.23
MBD3-209ENST00000592012 GPSM2P81274 684 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 PKN1Q16512 942 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 ZNF804AQ7Z570 1209 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 CLIC6Q96NY7 704 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 CALM1P0DP23 149 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 CALM2P0DP24 149 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 CALM3P0DP25 149 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 SYKP43405 635 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 NR5A1Q13285 461 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 RESP18Q5W5W9 173 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 PIBF1Q8WXW3 757 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 SHISA4Q96DD7 197 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 GPR101Q96P66 508 aaPredicted RBP22.74■■□□□ 1.23
MBD3-209ENST00000592012 KCNF1Q9H3M0 494 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 RBM28Q9NW13 759 aaKnown RBP22.74■■□□□ 1.23
MBD3-209ENST00000592012 MCM9Q9NXL9 1143 aa22.74■■□□□ 1.23
MBD3-209ENST00000592012 LAMB1P07942 1786 aa22.73■■□□□ 1.23
MBD3-209ENST00000592012 PRPF3O43395 683 aaKnown RBP22.73■■□□□ 1.23
MBD3-209ENST00000592012 NMT2O60551 498 aa22.73■■□□□ 1.23
MBD3-209ENST00000592012 ST5P78524 1137 aa22.73■■□□□ 1.23
MBD3-209ENST00000592012 GRIK5Q16478 980 aa22.73■■□□□ 1.23
MBD3-209ENST00000592012 RILPL1Q5EBL4 403 aa22.73■■□□□ 1.23
MBD3-209ENST00000592012 FAM47AQ5JRC9 791 aa22.73■■□□□ 1.23
MBD3-209ENST00000592012 SARM1Q6SZW1 724 aa22.73■■□□□ 1.23
MBD3-209ENST00000592012 CEP57L1Q8IYX8 460 aa22.73■■□□□ 1.23
MBD3-209ENST00000592012 KIAA1551Q9HCM1 1747 aa22.73■■□□□ 1.23
MBD3-209ENST00000592012 CUTAO60888 179 aa22.72■■□□□ 1.23
MBD3-209ENST00000592012 DDAH1O94760 285 aa22.72■■□□□ 1.23
MBD3-209ENST00000592012 PLEKHA8P1O95397 391 aa22.72■■□□□ 1.23
MBD3-209ENST00000592012 AKAP17AQ02040 695 aaKnown RBP22.72■■□□□ 1.23
MBD3-209ENST00000592012 PDE4BQ07343 736 aa22.72■■□□□ 1.23
MBD3-209ENST00000592012 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.72■■□□□ 1.23
MBD3-209ENST00000592012 OXER1Q8TDS5 423 aa22.72■■□□□ 1.23
MBD3-209ENST00000592012 BECN2A8MW95 431 aa22.72■■□□□ 1.23
MBD3-209ENST00000592012 USP17L8P0C7I0 530 aa22.72■■□□□ 1.23
MBD3-209ENST00000592012 NAT10Q9H0A0 1025 aaKnown RBP22.72■■□□□ 1.23
MBD3-209ENST00000592012 V9GY48 417 aaPredicted RBP22.72■■□□□ 1.23
MBD3-209ENST00000592012 RBM6P78332 1123 aaKnown RBP22.71■■□□□ 1.23
MBD3-209ENST00000592012 DIXDC1Q155Q3 683 aa22.71■■□□□ 1.23
MBD3-209ENST00000592012 KRI1Q8N9T8 703 aaKnown RBP22.71■■□□□ 1.23
MBD3-209ENST00000592012 RBM17Q96I25 401 aaKnown RBP22.71■■□□□ 1.23
MBD3-209ENST00000592012 PPP4CP60510 307 aa22.7■■□□□ 1.22
MBD3-209ENST00000592012 DPCR1Q3MIW9 517 aa22.7■■□□□ 1.22
MBD3-209ENST00000592012 C12orf60Q5U649 245 aa22.7■■□□□ 1.22
MBD3-209ENST00000592012 SH3RF3Q8TEJ3 882 aaPredicted RBP22.7■■□□□ 1.22
MBD3-209ENST00000592012 VPS54Q9P1Q0 977 aa22.7■■□□□ 1.22
MBD3-209ENST00000592012 TRIM37O94972 964 aa22.7■■□□□ 1.22
MBD3-209ENST00000592012 XBP1P17861 261 aa22.7■■□□□ 1.22
MBD3-209ENST00000592012 GSTO1P78417 241 aa22.7■■□□□ 1.22
MBD3-209ENST00000592012 TMTC3Q6ZXV5 915 aa22.7■■□□□ 1.22
MBD3-209ENST00000592012 FBXW7Q969H0 707 aa22.7■■□□□ 1.22
MBD3-209ENST00000592012 CD209Q9NNX6 404 aa22.7■■□□□ 1.22
MBD3-209ENST00000592012 hCG_1642624A0A1W2PR95 340 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 BBOX1O75936 387 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 UFL1O94874 794 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 ATP2B4P23634 1241 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 NOLC1Q14978 699 aaKnown RBP eCLIP22.69■■□□□ 1.22
MBD3-209ENST00000592012 PHF20Q9BVI0 1012 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 TSPY2A6NKD2 308 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 BAG3O95817 575 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 HOXA10P31260 410 aaPredicted RBP22.69■■□□□ 1.22
MBD3-209ENST00000592012 USP5P45974 858 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 DDR1Q08345 913 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 ZRSR1Q15695 479 aaKnown RBP22.69■■□□□ 1.22
MBD3-209ENST00000592012 RCSD1Q6JBY9 416 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 KRT27Q7Z3Y8 459 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 CABP5Q9NP86 173 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 PCDHB6Q9Y5E3 794 aa22.69■■□□□ 1.22
MBD3-209ENST00000592012 BAZ2BQ9UIF8 2168 aaKnown RBP22.69■■□□□ 1.22
MBD3-209ENST00000592012 PTGS1P23219 599 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 PTPREP23469 700 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 CDC25BP30305 580 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 SLC4A8Q2Y0W8 1093 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 DRC7Q8IY82 874 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 BPIFA3Q9BQP9 254 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 NRBP1Q9UHY1 535 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 GGA1Q9UJY5 639 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 IL1R1P14778 569 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 NLRP12P59046 1061 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 CCDC186Q7Z3E2 898 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 SRBD1Q8N5C6 995 aaKnown RBP22.68■■□□□ 1.22
MBD3-209ENST00000592012 AOPEPQ8N6M6 819 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 FBXO2Q9UK22 296 aaPredicted RBP22.68■■□□□ 1.22
MBD3-209ENST00000592012 KCNH3Q9ULD8 1083 aa22.68■■□□□ 1.22
MBD3-209ENST00000592012 POLRMTO00411 1230 aaKnown RBP22.67■■□□□ 1.22
MBD3-209ENST00000592012 PROM2Q8N271 834 aa22.67■■□□□ 1.22
MBD3-209ENST00000592012 CTCFLQ8NI51 663 aaPredicted RBP22.67■■□□□ 1.22
MBD3-209ENST00000592012 KIAA1524Q8TCG1 905 aa22.67■■□□□ 1.22
MBD3-209ENST00000592012 TUBE1Q9UJT0 475 aa22.67■■□□□ 1.22
MBD3-209ENST00000592012 BIN1O00499 593 aa22.67■■□□□ 1.22
MBD3-209ENST00000592012 LDHCP07864 332 aa22.67■■□□□ 1.22
MBD3-209ENST00000592012 LONRF3Q496Y0 759 aa22.67■■□□□ 1.22
MBD3-209ENST00000592012 C17orf53Q8N3J3 647 aaPredicted RBP22.67■■□□□ 1.22
MBD3-209ENST00000592012 MRFAP1L1Q96HT8 127 aa22.67■■□□□ 1.22
MBD3-209ENST00000592012 PODXL2Q9NZ53 605 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 226.4 ms