RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-206	ENST00000591515	TAOK2	Q9UL54	1235 aa		28.01	■■■□□ 2.07
LSM7-206	ENST00000591515	LOC285556	D6RIA3	1793 aa		28.01	■■■□□ 2.07
LSM7-206	ENST00000591515	PLXNB2	O15031	1838 aa		28	■■■□□ 2.07
LSM7-206	ENST00000591515	MX1	P20591	662 aa		28	■■■□□ 2.07
LSM7-206	ENST00000591515	NUCB1	Q02818	461 aa		28	■■■□□ 2.07
LSM7-206	ENST00000591515		Q7L0L9	218 aa		28	■■■□□ 2.07
LSM7-206	ENST00000591515	DEFB123	Q8N688	67 aa		28	■■■□□ 2.07
LSM7-206	ENST00000591515	SMCR8	Q8TEV9	937 aa	Predicted RBP	28	■■■□□ 2.07
LSM7-206	ENST00000591515	DNAJC2	Q99543	621 aa	Known RBP	28	■■■□□ 2.07
LSM7-206	ENST00000591515	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	28	■■■□□ 2.07
LSM7-206	ENST00000591515	ATAD5	Q96QE3	1844 aa		27.99	■■■□□ 2.07
LSM7-206	ENST00000591515	CYP2E1	P05181	493 aa	Predicted RBP	27.99	■■■□□ 2.07
LSM7-206	ENST00000591515	MAP3K12	Q12852	859 aa		27.99	■■■□□ 2.07
LSM7-206	ENST00000591515	LNPK	Q9C0E8	428 aa		27.99	■■■□□ 2.07
LSM7-206	ENST00000591515	BOLA2	Q9H3K6	86 aa		27.99	■■■□□ 2.07
LSM7-206	ENST00000591515	RFX7	Q2KHR2	1363 aa		27.99	■■■□□ 2.07
LSM7-206	ENST00000591515	GLRX3	O76003	335 aa	Known RBP	27.98	■■■□□ 2.07
LSM7-206	ENST00000591515	SLURP2	P0DP57	97 aa		27.98	■■■□□ 2.07
LSM7-206	ENST00000591515	TBC1D9	Q6ZT07	1266 aa		27.98	■■■□□ 2.07
LSM7-206	ENST00000591515	SH3BP5L	Q7L8J4	393 aa		27.98	■■■□□ 2.07
LSM7-206	ENST00000591515	HAUS7	Q99871	368 aa		27.98	■■■□□ 2.07
LSM7-206	ENST00000591515	NOL10	Q9BSC4	688 aa	Known RBP	27.98	■■■□□ 2.07
LSM7-206	ENST00000591515	RGS3	P49796	1198 aa		27.97	■■■□□ 2.07
LSM7-206	ENST00000591515	ANKRD13C	Q8N6S4	541 aa		27.97	■■■□□ 2.07
LSM7-206	ENST00000591515	COA7	Q96BR5	231 aa		27.97	■■■□□ 2.07
LSM7-206	ENST00000591515	PAG1	Q9NWQ8	432 aa		27.97	■■■□□ 2.07
LSM7-206	ENST00000591515	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	27.97	■■■□□ 2.07
LSM7-206	ENST00000591515	IDH1	O75874	414 aa	Known RBP	27.96	■■■□□ 2.07
LSM7-206	ENST00000591515	MECOM	Q03112	1051 aa		27.96	■■■□□ 2.07
LSM7-206	ENST00000591515	ANKLE1	Q8NAG6	615 aa		27.96	■■■□□ 2.07
LSM7-206	ENST00000591515	FAM163A	Q96GL9	167 aa	Predicted RBP	27.96	■■■□□ 2.07
LSM7-206	ENST00000591515	CCDC136	Q96JN2	1154 aa		27.96	■■■□□ 2.07
LSM7-206	ENST00000591515	GOLIM4	O00461	696 aa		27.95	■■■□□ 2.06
LSM7-206	ENST00000591515	MAP3K10	Q02779	954 aa		27.95	■■■□□ 2.06
LSM7-206	ENST00000591515	NAA16	Q6N069	864 aa	Predicted RBP	27.95	■■■□□ 2.06
LSM7-206	ENST00000591515	CENPQ	Q7L2Z9	268 aa	Predicted RBP	27.95	■■■□□ 2.06
LSM7-206	ENST00000591515	NSUN4	Q96CB9	384 aa	Known RBP	27.95	■■■□□ 2.06
LSM7-206	ENST00000591515	IDI2	Q9BXS1	227 aa		27.95	■■■□□ 2.06
LSM7-206	ENST00000591515	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	27.95	■■■□□ 2.06
LSM7-206	ENST00000591515	AGTPBP1	Q9UPW5	1226 aa		27.95	■■■□□ 2.06
LSM7-206	ENST00000591515	STXBP5L	Q9Y2K9	1186 aa		27.95	■■■□□ 2.06
LSM7-206	ENST00000591515	TRIM75P	A6NK02	468 aa		27.94	■■■□□ 2.06
LSM7-206	ENST00000591515	FAM110C	Q1W6H9	321 aa		27.94	■■■□□ 2.06
LSM7-206	ENST00000591515	LRRFIP1	Q32MZ4	808 aa	Known RBP	27.94	■■■□□ 2.06
LSM7-206	ENST00000591515	LRIT3	Q3SXY7	679 aa		27.94	■■■□□ 2.06
LSM7-206	ENST00000591515	CCDC84	Q86UT8	332 aa	Predicted RBP	27.94	■■■□□ 2.06
LSM7-206	ENST00000591515	PIH1D3	Q9NQM4	214 aa	Known RBP	27.94	■■■□□ 2.06
LSM7-206	ENST00000591515	MTMR10	Q9NXD2	777 aa		27.94	■■■□□ 2.06
LSM7-206	ENST00000591515	MAST2	Q6P0Q8	1798 aa		27.94	■■■□□ 2.06
LSM7-206	ENST00000591515	MROH7-TTC4	A0A0A0MT08	1334 aa		27.93	■■■□□ 2.06
LSM7-206	ENST00000591515	ENTPD3	O75355	529 aa		27.93	■■■□□ 2.06
LSM7-206	ENST00000591515	MAP4K4	O95819	1239 aa	Predicted RBP	27.93	■■■□□ 2.06
LSM7-206	ENST00000591515	SYN1	P17600	705 aa		27.93	■■■□□ 2.06
LSM7-206	ENST00000591515	MAGEA10	P43363	369 aa	Predicted RBP	27.93	■■■□□ 2.06
LSM7-206	ENST00000591515	TREML2	Q5T2D2	321 aa		27.93	■■■□□ 2.06
LSM7-206	ENST00000591515	GAK	O14976	1311 aa		27.92	■■■□□ 2.06
LSM7-206	ENST00000591515	DDTL	A6NHG4	134 aa	Predicted RBP	27.92	■■■□□ 2.06
LSM7-206	ENST00000591515	BAG3	O95817	575 aa		27.92	■■■□□ 2.06
LSM7-206	ENST00000591515	HMGCR	P04035	888 aa		27.92	■■■□□ 2.06
LSM7-206	ENST00000591515	ZSCAN25	Q6NSZ9	544 aa		27.92	■■■□□ 2.06
LSM7-206	ENST00000591515	CERS3	Q8IU89	383 aa		27.92	■■■□□ 2.06
LSM7-206	ENST00000591515	CTNND1	O60716	968 aa	Known RBP	27.91	■■■□□ 2.06
LSM7-206	ENST00000591515	TRIM32	Q13049	653 aa		27.91	■■■□□ 2.06
LSM7-206	ENST00000591515	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	27.91	■■■□□ 2.06
LSM7-206	ENST00000591515	TDH	Q8IZJ6	230 aa		27.91	■■■□□ 2.06
LSM7-206	ENST00000591515	NBPF3	Q9H094	633 aa		27.91	■■■□□ 2.06
LSM7-206	ENST00000591515	SALL3	Q9BXA9	1300 aa		27.91	■■■□□ 2.06
LSM7-206	ENST00000591515	PLCG2	P16885	1265 aa		27.9	■■■□□ 2.06
LSM7-206	ENST00000591515	PDE1A	P54750	535 aa		27.9	■■■□□ 2.06
LSM7-206	ENST00000591515	OTUD7A	Q8TE49	926 aa	Predicted RBP	27.9	■■■□□ 2.06
LSM7-206	ENST00000591515	ANTXR1	Q9H6X2	564 aa		27.9	■■■□□ 2.06
LSM7-206	ENST00000591515	NDUFB9	Q9Y6M9	179 aa		27.9	■■■□□ 2.06
LSM7-206	ENST00000591515	DDX4	Q9NQI0	724 aa	Known RBP	27.89	■■■□□ 2.06
LSM7-206	ENST00000591515	PNMA3	Q9UL41	463 aa		27.89	■■■□□ 2.06
LSM7-206	ENST00000591515	RPTOR	Q8N122	1335 aa		27.89	■■■□□ 2.05
LSM7-206	ENST00000591515	GPR75-ASB3	A0A0A6YYF3	556 aa		27.88	■■■□□ 2.05
LSM7-206	ENST00000591515	BTD	P43251	543 aa		27.88	■■■□□ 2.05
LSM7-206	ENST00000591515	MAGEB6	Q8N7X4	407 aa		27.88	■■■□□ 2.05
LSM7-206	ENST00000591515	PI4K2B	Q8TCG2	481 aa		27.88	■■■□□ 2.05
LSM7-206	ENST00000591515	C11orf49	Q9H6J7	331 aa		27.88	■■■□□ 2.05
LSM7-206	ENST00000591515	GJD2	Q9UKL4	321 aa		27.88	■■■□□ 2.05
LSM7-206	ENST00000591515	CYP7A1	P22680	504 aa		27.87	■■■□□ 2.05
LSM7-206	ENST00000591515	SLC9C2	Q5TAH2	1124 aa		27.87	■■■□□ 2.05
LSM7-206	ENST00000591515	TSHZ3	Q63HK5	1081 aa		27.87	■■■□□ 2.05
LSM7-206	ENST00000591515	HMX1	Q9NP08	348 aa	Predicted RBP	27.87	■■■□□ 2.05
LSM7-206	ENST00000591515	PPP4R2	Q9NY27	417 aa		27.87	■■■□□ 2.05
LSM7-206	ENST00000591515	FRMPD3	Q5JV73	1810 aa		27.86	■■■□□ 2.05
LSM7-206	ENST00000591515	PROCA1	Q8NCQ7	364 aa	Predicted RBP	27.86	■■■□□ 2.05
LSM7-206	ENST00000591515	COL25A1	Q9BXS0	654 aa	Predicted RBP	27.86	■■■□□ 2.05
LSM7-206	ENST00000591515	OSBPL3	Q9H4L5	887 aa		27.86	■■■□□ 2.05
LSM7-206	ENST00000591515	PICALM	Q13492	652 aa		27.85	■■■□□ 2.05
LSM7-206	ENST00000591515	KBTBD3	Q8NAB2	608 aa		27.85	■■■□□ 2.05
LSM7-206	ENST00000591515	UBE2O	Q9C0C9	1292 aa	Known RBP	27.85	■■■□□ 2.05
LSM7-206	ENST00000591515	OGDHL	Q9ULD0	1010 aa		27.85	■■■□□ 2.05
LSM7-206	ENST00000591515	PFAS	O15067	1338 aa		27.85	■■■□□ 2.05
LSM7-206	ENST00000591515	ZFY	P08048	801 aa	Predicted RBP	27.84	■■■□□ 2.05
LSM7-206	ENST00000591515	PDE6A	P16499	860 aa		27.84	■■■□□ 2.05
LSM7-206	ENST00000591515	PLEKHM2	Q8IWE5	1019 aa		27.84	■■■□□ 2.05
LSM7-206	ENST00000591515	TRIB2	Q92519	343 aa		27.84	■■■□□ 2.05
LSM7-206	ENST00000591515	GCLC	P48506	637 aa	Predicted RBP	27.83	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms