RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 LDLRAD1Q5T700 205 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 SAPCD2Q86UD0 394 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 STAG1Q8WVM7 1258 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 SLC10A4Q96EP9 437 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 ELP3Q9H9T3 547 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 ROBO3Q96MS0 1386 aa21.73■■□□□ 1.07
CROCCP3-205ENST00000591316 SIPA1L1O43166 1804 aa21.73■■□□□ 1.07
CROCCP3-205ENST00000591316 E7EWF7 191 aa21.73■■□□□ 1.07
CROCCP3-205ENST00000591316 GH2P01242 217 aa21.73■■□□□ 1.07
CROCCP3-205ENST00000591316 HSPA4P34932 840 aa21.73■■□□□ 1.07
CROCCP3-205ENST00000591316 RASEFQ8IZ41 740 aa21.73■■□□□ 1.07
CROCCP3-205ENST00000591316 CABP5Q9NP86 173 aa21.73■■□□□ 1.07
CROCCP3-205ENST00000591316 ZKSCAN1P17029 563 aaPredicted RBP21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 MCCP23508 829 aa21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 HTRA3P83110 453 aa21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 TFAP4Q01664 338 aa21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 RAB3GAP1Q15042 981 aa21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 CCDC84Q86UT8 332 aaPredicted RBP21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 NKX2-3Q8TAU0 364 aa21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 BACH2Q9BYV9 841 aa21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 PICK1Q9NRD5 415 aa21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 TLL2Q9Y6L7 1015 aa21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 NEDD4P46934 1319 aa21.72■■□□□ 1.07
CROCCP3-205ENST00000591316 TSPY2A6NKD2 308 aa21.71■■□□□ 1.07
CROCCP3-205ENST00000591316 B4E1Z4 1266 aa21.71■■□□□ 1.07
CROCCP3-205ENST00000591316 FGRP09769 529 aa21.71■■□□□ 1.07
CROCCP3-205ENST00000591316 TSPY3P0CV98 308 aa21.71■■□□□ 1.07
CROCCP3-205ENST00000591316 TSPY8P0CW00 308 aa21.71■■□□□ 1.07
CROCCP3-205ENST00000591316 TRDNQ13061 729 aa21.71■■□□□ 1.07
CROCCP3-205ENST00000591316 STOX1Q6ZVD7 989 aa21.71■■□□□ 1.07
CROCCP3-205ENST00000591316 SCYL3Q8IZE3 742 aa21.71■■□□□ 1.07
CROCCP3-205ENST00000591316 CCDC17Q96LX7 622 aa21.71■■□□□ 1.07
CROCCP3-205ENST00000591316 TRPM7Q96QT4 1865 aa21.71■■□□□ 1.07
CROCCP3-205ENST00000591316 EPB41L2O43491 1005 aaKnown RBP21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 PAXIP1Q6ZW49 1069 aaPredicted RBP21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 CREBZFQ9NS37 354 aa21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 TAOK2Q9UL54 1235 aa21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 ORC4O43929 436 aa21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 KDM4AO75164 1064 aa21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 ZNF157P51786 506 aaPredicted RBP21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 GRM1Q13255 1194 aa21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 SEPT2Q15019 361 aa21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 CNKSR2Q8WXI2 1034 aa21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 ZBTB21Q9ULJ3 1066 aa21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 SNX14Q9Y5W7 946 aa21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 SNCAIPQ9Y6H5 919 aa21.7■■□□□ 1.06
CROCCP3-205ENST00000591316 ASNSP08243 561 aa21.69■■□□□ 1.06
CROCCP3-205ENST00000591316 PCP11498 1178 aaKnown RBP21.69■■□□□ 1.06
CROCCP3-205ENST00000591316 MKRN3Q13064 507 aaKnown RBP21.69■■□□□ 1.06
CROCCP3-205ENST00000591316 NCOA7Q8NI08 942 aa21.69■■□□□ 1.06
CROCCP3-205ENST00000591316 ESR2Q92731 530 aa21.69■■□□□ 1.06
CROCCP3-205ENST00000591316 KRT23Q9C075 422 aa21.69■■□□□ 1.06
CROCCP3-205ENST00000591316 CNNM2Q9H8M5 875 aa21.69■■□□□ 1.06
CROCCP3-205ENST00000591316 ZSWIM5Q9P217 1185 aa21.69■■□□□ 1.06
CROCCP3-205ENST00000591316 ZHX2Q9Y6X8 837 aa21.69■■□□□ 1.06
CROCCP3-205ENST00000591316 PTPRAP18433 802 aa21.68■■□□□ 1.06
CROCCP3-205ENST00000591316 ADCK5Q3MIX3 580 aa21.68■■□□□ 1.06
CROCCP3-205ENST00000591316 NOL9Q5SY16 702 aaKnown RBP21.68■■□□□ 1.06
CROCCP3-205ENST00000591316 RGMBQ6NW40 437 aa21.68■■□□□ 1.06
CROCCP3-205ENST00000591316 CHST3Q7LGC8 479 aa21.68■■□□□ 1.06
CROCCP3-205ENST00000591316 RALYLQ86SE5 291 aaKnown RBP21.68■■□□□ 1.06
CROCCP3-205ENST00000591316 ZKSCAN3Q9BRR0 538 aa21.68■■□□□ 1.06
CROCCP3-205ENST00000591316 PAPPA2Q9BXP8 1791 aa21.67■■□□□ 1.06
CROCCP3-205ENST00000591316 GUCY1A2P33402 732 aa21.67■■□□□ 1.06
CROCCP3-205ENST00000591316 ATP2B2Q01814 1243 aa21.67■■□□□ 1.06
CROCCP3-205ENST00000591316 TMEM179Q6ZVK1 233 aa21.67■■□□□ 1.06
CROCCP3-205ENST00000591316 CLEC10AQ8IUN9 316 aa21.67■■□□□ 1.06
CROCCP3-205ENST00000591316 OPTNQ96CV9 577 aa21.67■■□□□ 1.06
CROCCP3-205ENST00000591316 OTUD5Q96G74 571 aa21.67■■□□□ 1.06
CROCCP3-205ENST00000591316 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.67■■□□□ 1.06
CROCCP3-205ENST00000591316 UPF2Q9HAU5 1272 aaKnown RBP21.67■■□□□ 1.06
CROCCP3-205ENST00000591316 LAMB1P07942 1786 aa21.67■■□□□ 1.06
CROCCP3-205ENST00000591316 UNCXA6NJT0 531 aa21.66■■□□□ 1.06
CROCCP3-205ENST00000591316 USP17L5A8MUK1 530 aa21.66■■□□□ 1.06
CROCCP3-205ENST00000591316 NMT2O60551 498 aa21.66■■□□□ 1.06
CROCCP3-205ENST00000591316 DEFB115Q30KQ5 88 aa21.66■■□□□ 1.06
CROCCP3-205ENST00000591316 NEDD1Q8NHV4 660 aa21.66■■□□□ 1.06
CROCCP3-205ENST00000591316 KCNB2Q92953 911 aa21.66■■□□□ 1.06
CROCCP3-205ENST00000591316 NEK1Q96PY6 1258 aa21.66■■□□□ 1.06
CROCCP3-205ENST00000591316 TSGA10IPQ3SY00 556 aa21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 CYB5R4Q7L1T6 521 aa21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 ERO1BQ86YB8 467 aa21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 JAKMIP1Q96N16 626 aaKnown RBP21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 C22orf23Q9BZE7 217 aa21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 HSPA6P17066 643 aa21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 COL9A3Q14050 684 aaPredicted RBP21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 KRT32Q14532 448 aa21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 CYP4F22Q6NT55 531 aa21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 CEP95Q96GE4 821 aa21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 IL17RBQ9NRM6 502 aa21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 GINM1Q9NU53 330 aa21.65■■□□□ 1.06
CROCCP3-205ENST00000591316 PPATQ06203 517 aa21.64■■□□□ 1.05
CROCCP3-205ENST00000591316 SPP2Q13103 211 aa21.64■■□□□ 1.05
CROCCP3-205ENST00000591316 KANSL2Q9H9L4 492 aa21.64■■□□□ 1.05
CROCCP3-205ENST00000591316 SPDYE5A6NIY4 337 aa21.63■■□□□ 1.05
CROCCP3-205ENST00000591316 TRIM75PA6NK02 468 aa21.63■■□□□ 1.05
CROCCP3-205ENST00000591316 IRF6O14896 467 aa21.63■■□□□ 1.05
CROCCP3-205ENST00000591316 CPA1P15085 419 aa21.63■■□□□ 1.05
CROCCP3-205ENST00000591316 GJA5P36382 358 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms