RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, humanhuman

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-208ENST00000590470 FGRP09769 529 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 RXRAP19793 462 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 GABPAQ06546 454 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 TMEM67Q5HYA8 995 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 USP48Q86UV5 1035 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 HSCBQ8IWL3 235 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 CCDC144CPQ8IYA2 1237 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 ZNF444Q8N0Y2 327 aaPredicted RBP11.05□□□□□ -0.64
ZNF397-208ENST00000590470 ESR2Q92731 530 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 MYL10Q9BUA6 226 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 TRIM34Q9BYJ4 488 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 KRT23Q9C075 422 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 CNNM2Q9H8M5 875 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.05□□□□□ -0.64
ZNF397-208ENST00000590470 PI4KBQ9UBF8 816 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 TPCN1Q9ULQ1 816 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 CLEC11AQ9Y240 323 aa11.05□□□□□ -0.64
ZNF397-208ENST00000590470 ATRNL1Q5VV63 1379 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 MYH4Q9Y623 1939 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 K7ELQ4 463 aaPredicted RBP11.04□□□□□ -0.64
ZNF397-208ENST00000590470 SH2B2O14492 632 aaPredicted RBP11.04□□□□□ -0.64
ZNF397-208ENST00000590470 TNNI2P48788 182 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 CCT2P78371 535 aaKnown RBP11.04□□□□□ -0.64
ZNF397-208ENST00000590470 ME3Q16798 604 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 RASGRP2Q7LDG7 609 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 CCDC84Q86UT8 332 aaPredicted RBP11.04□□□□□ -0.64
ZNF397-208ENST00000590470 FAM83AQ86UY5 434 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 IGDCC4Q8TDY8 1250 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 SNX21Q969T3 373 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 DCPSQ96C86 337 aaKnown RBP11.04□□□□□ -0.64
ZNF397-208ENST00000590470 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.04□□□□□ -0.64
ZNF397-208ENST00000590470 GLIS2Q9BZE0 524 aaPredicted RBP11.04□□□□□ -0.64
ZNF397-208ENST00000590470 DHX36Q9H2U1 1008 aaKnown RBP11.04□□□□□ -0.64
ZNF397-208ENST00000590470 LY9Q9HBG7 655 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 IL17RBQ9NRM6 502 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 MTMR7Q9Y216 660 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 TNKSO95271 1327 aa11.04□□□□□ -0.64
ZNF397-208ENST00000590470 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
ZNF397-208ENST00000590470 GREB1LQ9C091 1923 aaPredicted RBP11.03□□□□□ -0.64
ZNF397-208ENST00000590470 SSC5DA1L4H1 1573 aa11.03□□□□□ -0.64
ZNF397-208ENST00000590470 KLF18A0A0U1RQI7 1052 aa11.03□□□□□ -0.64
ZNF397-208ENST00000590470 NPM3O75607 178 aaKnown RBP11.03□□□□□ -0.64
ZNF397-208ENST00000590470 HMGB1P09429 215 aaKnown RBP11.03□□□□□ -0.64
ZNF397-208ENST00000590470 TSPY3P0CV98 308 aa11.03□□□□□ -0.64
ZNF397-208ENST00000590470 TSPY8P0CW00 308 aa11.03□□□□□ -0.64
ZNF397-208ENST00000590470 ST3GAL1Q11201 340 aa11.03□□□□□ -0.64
ZNF397-208ENST00000590470 FKBP1CQ5VVH2 108 aa11.03□□□□□ -0.64
ZNF397-208ENST00000590470 MAP1SQ66K74 1059 aaPredicted RBP11.03□□□□□ -0.64
ZNF397-208ENST00000590470 NFXL1Q6ZNB6 911 aa11.03□□□□□ -0.64
ZNF397-208ENST00000590470 CCDC83Q8IWF9 413 aa11.03□□□□□ -0.64
ZNF397-208ENST00000590470 ENAHQ8N8S7 591 aaPredicted RBP11.03□□□□□ -0.64
ZNF397-208ENST00000590470 TMX3Q96JJ7 454 aa11.03□□□□□ -0.64
ZNF397-208ENST00000590470 IPO9Q96P70 1041 aaKnown RBP11.03□□□□□ -0.64
ZNF397-208ENST00000590470 ZSCAN10Q96SZ4 725 aaPredicted RBP11.03□□□□□ -0.64
ZNF397-208ENST00000590470 UBAC1Q9BSL1 405 aa11.03□□□□□ -0.64
ZNF397-208ENST00000590470 EHD4Q9H223 541 aa11.03□□□□□ -0.64
ZNF397-208ENST00000590470 NCOA5Q9HCD5 579 aaKnown RBP11.03□□□□□ -0.64
ZNF397-208ENST00000590470 COL2A1P02458 1487 aaPredicted RBP11.03□□□□□ -0.64
ZNF397-208ENST00000590470 TRAF5O00463 557 aa11.02□□□□□ -0.65
ZNF397-208ENST00000590470 MMP14P50281 582 aa11.02□□□□□ -0.65
ZNF397-208ENST00000590470 ATP2B2Q01814 1243 aa11.02□□□□□ -0.65
ZNF397-208ENST00000590470 WTAPQ15007 396 aa11.02□□□□□ -0.65
ZNF397-208ENST00000590470 SEC23AQ15436 765 aa11.02□□□□□ -0.65
ZNF397-208ENST00000590470 CERKLQ49MI3 558 aaPredicted RBP11.02□□□□□ -0.65
ZNF397-208ENST00000590470 USP50Q70EL3 339 aaPredicted RBP11.02□□□□□ -0.65
ZNF397-208ENST00000590470 MOB2Q70IA6 237 aa11.02□□□□□ -0.65
ZNF397-208ENST00000590470 APOBEC3FQ8IUX4 373 aaKnown RBP11.02□□□□□ -0.65
ZNF397-208ENST00000590470 FOXP4Q8IVH2 680 aaPredicted RBP11.02□□□□□ -0.65
ZNF397-208ENST00000590470 SWAP70Q9UH65 585 aa11.02□□□□□ -0.65
ZNF397-208ENST00000590470 LIMCH1Q9UPQ0 1083 aa11.02□□□□□ -0.65
ZNF397-208ENST00000590470 OTOFQ9HC10 1997 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 IQCA1LA6NCM1 817 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 GOLGA8BA8MQT2 603 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 GH2P01242 217 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 GUCY1A2P33402 732 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 TNFAIP1Q13829 316 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 BECN1Q14457 450 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 SEPT2Q15019 361 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 RCSD1Q6JBY9 416 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 TATDN1Q6P1N9 297 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 KRT26Q7Z3Y9 468 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 CEP95Q96GE4 821 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 TAOK2Q9UL54 1235 aa11.01□□□□□ -0.65
ZNF397-208ENST00000590470 ANGEL1Q9UNK9 670 aaKnown RBP11.01□□□□□ -0.65
ZNF397-208ENST00000590470 DOCK1Q14185 1865 aa11□□□□□ -0.65
ZNF397-208ENST00000590470 ERICH2A1L162 156 aa11□□□□□ -0.65
ZNF397-208ENST00000590470 CCDC69A6NI79 296 aa11□□□□□ -0.65
ZNF397-208ENST00000590470 VEGFAP15692 232 aaPredicted RBP11□□□□□ -0.65
ZNF397-208ENST00000590470 PDIA3P30101 505 aaKnown RBP11□□□□□ -0.65
ZNF397-208ENST00000590470 INPP5BP32019 993 aa11□□□□□ -0.65
ZNF397-208ENST00000590470 SCRN1Q12765 414 aa11□□□□□ -0.65
ZNF397-208ENST00000590470 RAB3GAP1Q15042 981 aa11□□□□□ -0.65
ZNF397-208ENST00000590470 ABCB5Q2M3G0 1257 aa11□□□□□ -0.65
ZNF397-208ENST00000590470 IFIT1BQ5T764 474 aaKnown RBP11□□□□□ -0.65
ZNF397-208ENST00000590470 METTL16Q86W50 562 aaKnown RBP11□□□□□ -0.65
ZNF397-208ENST00000590470 MICU3Q86XE3 530 aa11□□□□□ -0.65
ZNF397-208ENST00000590470 IQCA1Q86XH1 822 aa11□□□□□ -0.65
ZNF397-208ENST00000590470 SULF1Q8IWU6 871 aa11□□□□□ -0.65
ZNF397-208ENST00000590470 CMTR1Q8N1G2 835 aaKnown RBP11□□□□□ -0.65
ZNF397-208ENST00000590470 LRRC47Q8N1G4 583 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms