RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 MICU3Q86XE3 530 aa14.1□□□□□ -0.15
CCBE1-203ENST00000589116 ENAHQ8N8S7 591 aaPredicted RBP14.1□□□□□ -0.15
CCBE1-203ENST00000589116 ZKSCAN3Q9BRR0 538 aa14.1□□□□□ -0.15
CCBE1-203ENST00000589116 SENP2Q9HC62 589 aa14.1□□□□□ -0.15
CCBE1-203ENST00000589116 ZNRF3Q9ULT6 936 aa14.1□□□□□ -0.15
CCBE1-203ENST00000589116 CCDC196A0A1B0GTZ2 297 aa14.09□□□□□ -0.15
CCBE1-203ENST00000589116 VPS37CA5D8V6 355 aaPredicted RBP14.09□□□□□ -0.15
CCBE1-203ENST00000589116 TSPY2A6NKD2 308 aa14.09□□□□□ -0.15
CCBE1-203ENST00000589116 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
CCBE1-203ENST00000589116 VIL1P09327 827 aaKnown RBP14.09□□□□□ -0.15
CCBE1-203ENST00000589116 PLCD1P51178 756 aa14.09□□□□□ -0.15
CCBE1-203ENST00000589116 EVX2Q03828 476 aa14.09□□□□□ -0.15
CCBE1-203ENST00000589116 IFIT1BQ5T764 474 aaKnown RBP14.09□□□□□ -0.15
CCBE1-203ENST00000589116 ZNF654Q8IZM8 581 aa14.09□□□□□ -0.15
CCBE1-203ENST00000589116 DDX11Q96FC9 970 aa14.09□□□□□ -0.15
CCBE1-203ENST00000589116 MKNK2Q9HBH9 465 aa14.09□□□□□ -0.15
CCBE1-203ENST00000589116 SAP30BPQ9UHR5 308 aaKnown RBP14.09□□□□□ -0.15
CCBE1-203ENST00000589116 TAOK2Q9UL54 1235 aa14.09□□□□□ -0.15
CCBE1-203ENST00000589116 CALM1P0DP23 149 aa14.08□□□□□ -0.16
CCBE1-203ENST00000589116 CALM2P0DP24 149 aa14.08□□□□□ -0.16
CCBE1-203ENST00000589116 CALM3P0DP25 149 aa14.08□□□□□ -0.16
CCBE1-203ENST00000589116 FOXD4L5Q5VV16 416 aaPredicted RBP14.08□□□□□ -0.16
CCBE1-203ENST00000589116 FOXD4L4Q8WXT5 416 aaPredicted RBP14.08□□□□□ -0.16
CCBE1-203ENST00000589116 IDI2Q9BXS1 227 aa14.08□□□□□ -0.16
CCBE1-203ENST00000589116 OSBPL5Q9H0X9 879 aaPredicted RBP14.08□□□□□ -0.16
CCBE1-203ENST00000589116 TCP11L1Q9NUJ3 509 aa14.08□□□□□ -0.16
CCBE1-203ENST00000589116 STK36Q9NRP7 1315 aa14.08□□□□□ -0.16
CCBE1-203ENST00000589116 MYH8P13535 1937 aa14.08□□□□□ -0.16
CCBE1-203ENST00000589116 DDAH1O94760 285 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 PICALMQ13492 652 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 SKOR2Q2VWA4 1001 aaPredicted RBP14.07□□□□□ -0.16
CCBE1-203ENST00000589116 MCTP1Q6DN14 999 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 ZNF444Q8N0Y2 327 aaPredicted RBP14.07□□□□□ -0.16
CCBE1-203ENST00000589116 DYNLL2Q96FJ2 89 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 GMLQ99445 158 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 DDX4Q9NQI0 724 aaKnown RBP14.07□□□□□ -0.16
CCBE1-203ENST00000589116 HDAC9Q9UKV0 1011 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 COL2A1P02458 1487 aaPredicted RBP14.07□□□□□ -0.16
CCBE1-203ENST00000589116 H3BQV1 296 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 PSMD14O00487 310 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 HLA-DOAP06340 250 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 RASA1P20936 1047 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 CDK8P49336 464 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 RBM5P52756 815 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCBE1-203ENST00000589116 RTN1Q16799 776 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 SLC4A8Q2Y0W8 1093 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 CATIPQ7Z7H3 387 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 DGKHQ86XP1 1220 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 RAB11FIP4Q86YS3 637 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 AGBL3Q8NEM8 1001 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 JDP2Q8WYK2 163 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 ANKS1AQ92625 1134 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 ORC3Q9UBD5 711 aaPredicted RBP14.07□□□□□ -0.16
CCBE1-203ENST00000589116 SWAP70Q9UH65 585 aa14.07□□□□□ -0.16
CCBE1-203ENST00000589116 PLIN4Q96Q06 1357 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 NFKBIEO00221 500 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 DTNBO60941 627 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 RAD17O75943 681 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 TSPY3P0CV98 308 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 TSPY8P0CW00 308 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 FDPSP14324 419 aaKnown RBP14.06□□□□□ -0.16
CCBE1-203ENST00000589116 IFNAR1P17181 557 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 CDC27P30260 824 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 ADD1P35611 737 aaKnown RBP14.06□□□□□ -0.16
CCBE1-203ENST00000589116 MMP14P50281 582 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 TFAP4Q01664 338 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 GABPAQ06546 454 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 NTRK3Q16288 839 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 FAM47AQ5JRC9 791 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 MYL10Q9BUA6 226 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 EHD4Q9H223 541 aa14.06□□□□□ -0.16
CCBE1-203ENST00000589116 DHX36Q9H2U1 1008 aaKnown RBP14.06□□□□□ -0.16
CCBE1-203ENST00000589116 ZSCAN16Q9H4T2 348 aaPredicted RBP14.06□□□□□ -0.16
CCBE1-203ENST00000589116 FAM217BQ9NTX9 383 aaPredicted RBP14.06□□□□□ -0.16
CCBE1-203ENST00000589116 RBM28Q9NW13 759 aaKnown RBP14.06□□□□□ -0.16
CCBE1-203ENST00000589116 RXRAP19793 462 aa14.05□□□□□ -0.16
CCBE1-203ENST00000589116 CFAP100Q494V2 611 aa14.05□□□□□ -0.16
CCBE1-203ENST00000589116 OGFOD1Q8N543 542 aa14.05□□□□□ -0.16
CCBE1-203ENST00000589116 FANCBQ8NB91 859 aa14.05□□□□□ -0.16
CCBE1-203ENST00000589116 PRDM10Q9NQV6 1147 aa14.05□□□□□ -0.16
CCBE1-203ENST00000589116 SERPINB13Q9UIV8 391 aa14.05□□□□□ -0.16
CCBE1-203ENST00000589116 TCHHQ07283 1943 aa14.05□□□□□ -0.16
CCBE1-203ENST00000589116 FOXN1O15353 648 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 TRAK2O60296 914 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 TROAPQ12815 778 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 CIAPIN1Q6FI81 312 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 TMEM87AQ8NBN3 555 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 SLC44A5Q8NCS7 719 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 NEDD1Q8NHV4 660 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 WASF1Q92558 559 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 MAP3K14Q99558 947 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 MYH15Q9Y2K3 1946 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 ENTPD3O75355 529 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 FMNL1O95466 1100 aaPredicted RBP14.04□□□□□ -0.16
CCBE1-203ENST00000589116 NFIAQ12857 509 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 TNIP1Q15025 636 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 CSPP1Q1MSJ5 1256 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 RCSD1Q6JBY9 416 aa14.04□□□□□ -0.16
CCBE1-203ENST00000589116 CCDC144CPQ8IYA2 1237 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms