RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 PLAURQ03405 335 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 NFX1Q12986 1120 aaKnown RBP10.43□□□□□ -0.74
ATG4D-210ENST00000588972 SDE2Q6IQ49 451 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 ZNF746Q6NUN9 644 aaPredicted RBP10.43□□□□□ -0.74
ATG4D-210ENST00000588972 RIPOR1Q6ZS17 1223 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 ZNF662Q6ZS27 426 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 CEP120Q8N960 986 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 DZANK1Q9NVP4 752 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 STK32BQ9NY57 414 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 TLR6Q9Y2C9 796 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 NHSQ6T4R5 1651 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 ABCC6O95255 1503 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 TNS2Q63HR2 1409 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 GREM1O60565 184 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 ITPKAP23677 461 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 SOX9P48436 509 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 FAM160A1Q05DH4 1040 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 SPEM2Q0P670 501 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 SERINC3Q13530 473 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 NBPF6Q5VWK0 638 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 PTF1AQ7RTS3 328 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 MARCH10Q8NA82 808 aaPredicted RBP10.42□□□□□ -0.74
ATG4D-210ENST00000588972 NBPF4Q96M43 638 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 MTFR1LQ9H019 292 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 NUCKS1Q9H1E3 243 aaKnown RBP10.42□□□□□ -0.74
ATG4D-210ENST00000588972 EFCC1Q9HA90 598 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 ZFYVE1Q9HBF4 777 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 NDFIP2Q9NV92 336 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 PAPPAQ13219 1627 aa10.42□□□□□ -0.74
ATG4D-210ENST00000588972 USP47Q96K76 1375 aa10.41□□□□□ -0.74
ATG4D-210ENST00000588972 PF4P02776 101 aa10.41□□□□□ -0.74
ATG4D-210ENST00000588972 TXNRD1Q16881 649 aa10.41□□□□□ -0.74
ATG4D-210ENST00000588972 SPRED3Q2MJR0 410 aa10.41□□□□□ -0.74
ATG4D-210ENST00000588972 NLGN1Q8N2Q7 840 aa10.41□□□□□ -0.74
ATG4D-210ENST00000588972 SLC30A3Q99726 388 aa10.41□□□□□ -0.74
ATG4D-210ENST00000588972 CEP44Q9C0F1 390 aa10.41□□□□□ -0.74
ATG4D-210ENST00000588972 BHLHE41Q9C0J9 482 aaPredicted RBP10.41□□□□□ -0.74
ATG4D-210ENST00000588972 MARK1Q9P0L2 795 aa10.41□□□□□ -0.74
ATG4D-210ENST00000588972 SUPT16HQ9Y5B9 1047 aaKnown RBP10.41□□□□□ -0.74
ATG4D-210ENST00000588972 MAP3K5Q99683 1374 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 METTL12A8MUP2 240 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 NFKBIEO00221 500 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 ENC1O14682 589 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 BNIP3LO60238 219 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 COL9A2Q14055 689 aaPredicted RBP10.4□□□□□ -0.74
ATG4D-210ENST00000588972 NFE2L2Q16236 605 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 SLC15A2Q16348 729 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 DHX32Q7L7V1 743 aaKnown RBP10.4□□□□□ -0.74
ATG4D-210ENST00000588972 JAZF1Q86VZ6 243 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 BHMTQ93088 406 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 NSUN5Q96P11 429 aaKnown RBP10.4□□□□□ -0.74
ATG4D-210ENST00000588972 NECAB3Q96P71 396 aaPredicted RBP10.4□□□□□ -0.74
ATG4D-210ENST00000588972 HHIPQ96QV1 700 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 SYT17Q9BSW7 474 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 STRIP2Q9ULQ0 834 aa10.4□□□□□ -0.74
ATG4D-210ENST00000588972 RGPD5Q99666 1765 aa10.39□□□□□ -0.75
ATG4D-210ENST00000588972 NFAT5O94916 1531 aa10.39□□□□□ -0.75
ATG4D-210ENST00000588972 ST20-MTHFSA0A0A6YYL1 179 aa10.39□□□□□ -0.75
ATG4D-210ENST00000588972 MAN1A2O60476 641 aa10.39□□□□□ -0.75
ATG4D-210ENST00000588972 ETFBP38117 255 aa10.39□□□□□ -0.75
ATG4D-210ENST00000588972 LMNB2Q03252 620 aa10.39□□□□□ -0.75
ATG4D-210ENST00000588972 CAMK2GQ13555 558 aaPredicted RBP10.39□□□□□ -0.75
ATG4D-210ENST00000588972 RAB44Q7Z6P3 723 aaPredicted RBP10.39□□□□□ -0.75
ATG4D-210ENST00000588972 CARD10Q9BWT7 1032 aa10.39□□□□□ -0.75
ATG4D-210ENST00000588972 UBP1Q9NZI7 540 aa10.39□□□□□ -0.75
ATG4D-210ENST00000588972 MRVI1Q9Y6F6 885 aa10.39□□□□□ -0.75
ATG4D-210ENST00000588972 CCDC7Q96M83 1385 aa10.39□□□□□ -0.75
ATG4D-210ENST00000588972 SBNO2Q9Y2G9 1366 aa10.39□□□□□ -0.75
ATG4D-210ENST00000588972 EVC2Q86UK5 1308 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 A0A096LPE4 126 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 A0A1W2PPZ6 126 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 SLC35F4A4IF30 521 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 K7ELQ4 463 aaPredicted RBP10.38□□□□□ -0.75
ATG4D-210ENST00000588972 NRLP54845 237 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 C1QTNF8P60827 252 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 SNAP47Q5SQN1 464 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 AGMOQ6ZNB7 445 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 ARHGEF25Q86VW2 580 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 TMEM102Q8N9M5 508 aaPredicted RBP10.38□□□□□ -0.75
ATG4D-210ENST00000588972 GOLM1Q8NBJ4 401 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 NXPE3Q969Y0 559 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 SEC31BQ9NQW1 1179 aa10.38□□□□□ -0.75
ATG4D-210ENST00000588972 H7C1W4 665 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 TFE3P19532 575 aaPredicted RBP10.37□□□□□ -0.75
ATG4D-210ENST00000588972 CRKP46108 304 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 PTSQ03393 145 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 DBN1Q16643 649 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 EGFLAMQ63HQ2 1017 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 TTBK2Q6IQ55 1244 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 ANKS3Q6ZW76 656 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 KCNH5Q8NCM2 988 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 MRFAP1L1Q96HT8 127 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 TESK2Q96S53 571 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 ZNF576Q9H609 170 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 BTAF1O14981 1849 aa10.37□□□□□ -0.75
ATG4D-210ENST00000588972 EXOC5O00471 708 aa10.36□□□□□ -0.75
ATG4D-210ENST00000588972 PAGE1O75459 146 aa10.36□□□□□ -0.75
ATG4D-210ENST00000588972 CD33P20138 364 aa10.36□□□□□ -0.75
ATG4D-210ENST00000588972 APOBRQ0VD83 1088 aa10.36□□□□□ -0.75
ATG4D-210ENST00000588972 FAAP100Q0VG06 881 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms