RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 ABCB5Q2M3G0 1257 aa17.33■□□□□ 0.36
CNN1-208ENST00000588935 TATDN1Q6P1N9 297 aa17.33■□□□□ 0.36
CNN1-208ENST00000588935 SCYL3Q8IZE3 742 aa17.33■□□□□ 0.36
CNN1-208ENST00000588935 SNCAIPQ9Y6H5 919 aa17.33■□□□□ 0.36
CNN1-208ENST00000588935 RAB3GAP1Q15042 981 aa17.32■□□□□ 0.36
CNN1-208ENST00000588935 FAM47AQ5JRC9 791 aa17.32■□□□□ 0.36
CNN1-208ENST00000588935 MFSD6Q6ZSS7 791 aa17.32■□□□□ 0.36
CNN1-208ENST00000588935 TBC1D10CQ8IV04 446 aa17.32■□□□□ 0.36
CNN1-208ENST00000588935 OTUD5Q96G74 571 aa17.32■□□□□ 0.36
CNN1-208ENST00000588935 NBPF3Q9H094 633 aa17.32■□□□□ 0.36
CNN1-208ENST00000588935 CABP5Q9NP86 173 aa17.32■□□□□ 0.36
CNN1-208ENST00000588935 ANAPC4Q9UJX5 808 aa17.32■□□□□ 0.36
CNN1-208ENST00000588935 ATAD5Q96QE3 1844 aa17.31■□□□□ 0.36
CNN1-208ENST00000588935 ZMYM6O95789 1325 aa17.31■□□□□ 0.36
CNN1-208ENST00000588935 RANBP6O60518 1105 aaKnown RBP17.31■□□□□ 0.36
CNN1-208ENST00000588935 REC8O95072 547 aa17.31■□□□□ 0.36
CNN1-208ENST00000588935 SEC24BO95487 1268 aa17.31■□□□□ 0.36
CNN1-208ENST00000588935 CYP21A2P08686 494 aa17.31■□□□□ 0.36
CNN1-208ENST00000588935 RASA1P20936 1047 aa17.31■□□□□ 0.36
CNN1-208ENST00000588935 AKNAD1Q5T1N1 836 aa17.31■□□□□ 0.36
CNN1-208ENST00000588935 OPTNQ96CV9 577 aa17.31■□□□□ 0.36
CNN1-208ENST00000588935 CAPNS2Q96L46 248 aa17.31■□□□□ 0.36
CNN1-208ENST00000588935 TAF6LQ9Y6J9 622 aa17.31■□□□□ 0.36
CNN1-208ENST00000588935 ZHX2Q9Y6X8 837 aa17.31■□□□□ 0.36
CNN1-208ENST00000588935 PTPRAP18433 802 aa17.3■□□□□ 0.36
CNN1-208ENST00000588935 TFAP4Q01664 338 aa17.3■□□□□ 0.36
CNN1-208ENST00000588935 SEPT2Q15019 361 aa17.3■□□□□ 0.36
CNN1-208ENST00000588935 NOL9Q5SY16 702 aaKnown RBP17.3■□□□□ 0.36
CNN1-208ENST00000588935 CREB3L3Q68CJ9 461 aa17.3■□□□□ 0.36
CNN1-208ENST00000588935 RASAL3Q86YV0 1011 aa17.3■□□□□ 0.36
CNN1-208ENST00000588935 WNK4Q96J92 1243 aa17.3■□□□□ 0.36
CNN1-208ENST00000588935 ZNF287Q9HBT7 754 aa17.3■□□□□ 0.36
CNN1-208ENST00000588935 ZBTB21Q9ULJ3 1066 aa17.3■□□□□ 0.36
CNN1-208ENST00000588935 DOCK1Q14185 1865 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 SLC27A2O14975 620 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 AOC2O75106 756 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 GJA5P36382 358 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 VEGFBP49765 207 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 ATP2B2Q01814 1243 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 NECTIN1Q15223 517 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 C8orf34Q49A92 452 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 ERO1BQ86YB8 467 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 CLEC10AQ8IUN9 316 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 NKX2-3Q8TAU0 364 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 ZIC5Q96T25 663 aa17.29■□□□□ 0.36
CNN1-208ENST00000588935 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.29■□□□□ 0.36
CNN1-208ENST00000588935 ROBO3Q96MS0 1386 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 NEDD4P46934 1319 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 SPDYE5A6NIY4 337 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 TSPY2A6NKD2 308 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 USP17L5A8MUK1 530 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 B4E1Z4 1266 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 ASNSP08243 561 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 TSPY3P0CV98 308 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 TSPY8P0CW00 308 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 GUCY1A2P33402 732 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 SPRYD7Q5W111 196 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 STAG1Q8WVM7 1258 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 USP26Q9BXU7 913 aa17.28■□□□□ 0.36
CNN1-208ENST00000588935 RNF41Q9H4P4 317 aaPredicted RBP17.28■□□□□ 0.36
CNN1-208ENST00000588935 WDR33Q9C0J8 1336 aaKnown RBP17.27■□□□□ 0.36
CNN1-208ENST00000588935 UNCXA6NJT0 531 aa17.27■□□□□ 0.36
CNN1-208ENST00000588935 TRIM75PA6NK02 468 aa17.27■□□□□ 0.36
CNN1-208ENST00000588935 IRF6O14896 467 aa17.27■□□□□ 0.36
CNN1-208ENST00000588935 SLC10A3P09131 477 aa17.27■□□□□ 0.36
CNN1-208ENST00000588935 SPP2Q13103 211 aa17.27■□□□□ 0.36
CNN1-208ENST00000588935 STOX1Q6ZVD7 989 aa17.27■□□□□ 0.36
CNN1-208ENST00000588935 HHIPL1Q96JK4 782 aa17.27■□□□□ 0.36
CNN1-208ENST00000588935 LAMA4Q16363 1823 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 FAM155AB1AL88 458 aaPredicted RBP17.26■□□□□ 0.35
CNN1-208ENST00000588935 E7EWF7 191 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 ORC4O43929 436 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 NMT2O60551 498 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 KDM4AO75164 1064 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 ECE1P42892 770 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 KIF23Q02241 960 aaPredicted RBP17.26■□□□□ 0.35
CNN1-208ENST00000588935 PPATQ06203 517 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 TRDNQ13061 729 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 ZYXQ15942 572 aaKnown RBP17.26■□□□□ 0.35
CNN1-208ENST00000588935 RNF20Q5VTR2 975 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 TMEM179Q6ZVK1 233 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 RASEFQ8IZ41 740 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 ACER1Q8TDN7 264 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 ZKSCAN3Q9BRR0 538 aa17.26■□□□□ 0.35
CNN1-208ENST00000588935 FGRP09769 529 aa17.25■□□□□ 0.35
CNN1-208ENST00000588935 CHST3Q7LGC8 479 aa17.25■□□□□ 0.35
CNN1-208ENST00000588935 NEDD1Q8NHV4 660 aa17.25■□□□□ 0.35
CNN1-208ENST00000588935 ESR2Q92731 530 aa17.25■□□□□ 0.35
CNN1-208ENST00000588935 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
CNN1-208ENST00000588935 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.25■□□□□ 0.35
CNN1-208ENST00000588935 AS3MTQ9HBK9 375 aa17.25■□□□□ 0.35
CNN1-208ENST00000588935 TAOK2Q9UL54 1235 aa17.25■□□□□ 0.35
CNN1-208ENST00000588935 AFG3L2Q9Y4W6 797 aa17.25■□□□□ 0.35
CNN1-208ENST00000588935 RAD21O60216 631 aa17.24■□□□□ 0.35
CNN1-208ENST00000588935 HSPA4P34932 840 aa17.24■□□□□ 0.35
CNN1-208ENST00000588935 PPIL2Q13356 520 aa17.24■□□□□ 0.35
CNN1-208ENST00000588935 DGKZQ13574 1117 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms