RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 DCP1AQ9NPI6 582 aaPredicted RBP20.24■□□□□ 0.83
ERCC2-211ENST00000588652 ANKIB1Q9P2G1 1089 aa20.24■□□□□ 0.83
ERCC2-211ENST00000588652 PPP6R2O75170 966 aa20.24■□□□□ 0.83
ERCC2-211ENST00000588652 ARID5BQ14865 1188 aa20.24■□□□□ 0.83
ERCC2-211ENST00000588652 KIAA1468Q9P260 1216 aa20.24■□□□□ 0.83
ERCC2-211ENST00000588652 JAG2Q9Y219 1238 aa20.24■□□□□ 0.83
ERCC2-211ENST00000588652 UBR3Q6ZT12 1888 aa20.24■□□□□ 0.83
ERCC2-211ENST00000588652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.23■□□□□ 0.83
ERCC2-211ENST00000588652 PPP2R5BQ15173 497 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 TMED8Q6PL24 325 aaPredicted RBP20.23■□□□□ 0.83
ERCC2-211ENST00000588652 FBXW7Q969H0 707 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 ATP8A2Q9NTI2 1148 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 TRPC5Q9UL62 973 aaPredicted RBP20.23■□□□□ 0.83
ERCC2-211ENST00000588652 LAMB1P07942 1786 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 DLEC1Q9Y238 1755 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 MROH7-TTC4A0A0A0MT08 1334 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 BTBD18B2RXH4 712 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 ZNF202O95125 648 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 PFKFB1P16118 471 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 IQCA1Q86XH1 822 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 NOSTRINQ8IVI9 506 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 LEMD3Q9Y2U8 911 aa20.23■□□□□ 0.83
ERCC2-211ENST00000588652 CTIFO43310 598 aaKnown RBP20.22■□□□□ 0.83
ERCC2-211ENST00000588652 NEMFO60524 1076 aa20.22■□□□□ 0.83
ERCC2-211ENST00000588652 EVX2Q03828 476 aa20.22■□□□□ 0.83
ERCC2-211ENST00000588652 PRR5LQ6MZQ0 368 aa20.22■□□□□ 0.83
ERCC2-211ENST00000588652 JMYQ8N9B5 988 aa20.22■□□□□ 0.83
ERCC2-211ENST00000588652 KCNJ14Q9UNX9 436 aa20.22■□□□□ 0.83
ERCC2-211ENST00000588652 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.22■□□□□ 0.83
ERCC2-211ENST00000588652 KIAA1551Q9HCM1 1747 aa20.22■□□□□ 0.83
ERCC2-211ENST00000588652 SAFBQ15424 915 aaKnown RBP eCLIP20.22■□□□□ 0.83
ERCC2-211ENST00000588652 DPCR1Q3MIW9 517 aa20.22■□□□□ 0.83
ERCC2-211ENST00000588652 IFIT1BQ5T764 474 aaKnown RBP20.22■□□□□ 0.83
ERCC2-211ENST00000588652 DIS3L2Q8IYB7 885 aaKnown RBP20.22■□□□□ 0.83
ERCC2-211ENST00000588652 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.22■□□□□ 0.83
ERCC2-211ENST00000588652 RBM6P78332 1123 aaKnown RBP20.21■□□□□ 0.83
ERCC2-211ENST00000588652 SPTY2D1Q68D10 685 aaPredicted RBP20.21■□□□□ 0.83
ERCC2-211ENST00000588652 ARID3AQ99856 593 aa20.21■□□□□ 0.83
ERCC2-211ENST00000588652 BPIFA3Q9BQP9 254 aa20.21■□□□□ 0.83
ERCC2-211ENST00000588652 RNF26Q9BY78 433 aaPredicted RBP20.21■□□□□ 0.83
ERCC2-211ENST00000588652 TNNT1P13805 278 aa20.21■□□□□ 0.83
ERCC2-211ENST00000588652 DZIP1Q86YF9 867 aaKnown RBP20.21■□□□□ 0.83
ERCC2-211ENST00000588652 FOXP1Q9H334 677 aaPredicted RBP20.21■□□□□ 0.83
ERCC2-211ENST00000588652 XDHP47989 1333 aa20.2■□□□□ 0.82
ERCC2-211ENST00000588652 ORC4O43929 436 aa20.2■□□□□ 0.82
ERCC2-211ENST00000588652 CCDC94Q9BW85 323 aaPredicted RBP20.2■□□□□ 0.82
ERCC2-211ENST00000588652 SMTNL1A8MU46 457 aa20.19■□□□□ 0.82
ERCC2-211ENST00000588652 HSPA1LP34931 641 aa20.19■□□□□ 0.82
ERCC2-211ENST00000588652 TPD52L1Q16890 204 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-211ENST00000588652 SHC4Q6S5L8 630 aa20.19■□□□□ 0.82
ERCC2-211ENST00000588652 CATIPQ7Z7H3 387 aa20.19■□□□□ 0.82
ERCC2-211ENST00000588652 ARPP21Q9UBL0 812 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-211ENST00000588652 HPSEQ9Y251 543 aa20.19■□□□□ 0.82
ERCC2-211ENST00000588652 SLC3A2P08195 630 aaKnown RBP20.19■□□□□ 0.82
ERCC2-211ENST00000588652 GYS1P13807 737 aa20.19■□□□□ 0.82
ERCC2-211ENST00000588652 TROAPQ12815 778 aa20.19■□□□□ 0.82
ERCC2-211ENST00000588652 SBK1Q52WX2 424 aa20.19■□□□□ 0.82
ERCC2-211ENST00000588652 WDR66Q8TBY9 1149 aa20.19■□□□□ 0.82
ERCC2-211ENST00000588652 TOB1P50616 345 aaPredicted RBP20.18■□□□□ 0.82
ERCC2-211ENST00000588652 CCZ1BP86790 482 aa20.18■□□□□ 0.82
ERCC2-211ENST00000588652 CCZ1P86791 482 aaPredicted RBP20.18■□□□□ 0.82
ERCC2-211ENST00000588652 FUT2Q10981 343 aa20.18■□□□□ 0.82
ERCC2-211ENST00000588652 FILIP1Q7Z7B0 1213 aa20.18■□□□□ 0.82
ERCC2-211ENST00000588652 CERKQ8TCT0 537 aa20.18■□□□□ 0.82
ERCC2-211ENST00000588652 FAM237AA0A1B0GTK4 181 aa20.18■□□□□ 0.82
ERCC2-211ENST00000588652 CRY2Q49AN0 593 aa20.18■□□□□ 0.82
ERCC2-211ENST00000588652 ANKRD7Q92527 254 aa20.18■□□□□ 0.82
ERCC2-211ENST00000588652 RPGRQ92834 1020 aaKnown RBP20.18■□□□□ 0.82
ERCC2-211ENST00000588652 TIGD1Q96MW7 591 aa20.18■□□□□ 0.82
ERCC2-211ENST00000588652 LDHBP07195 334 aaKnown RBP20.17■□□□□ 0.82
ERCC2-211ENST00000588652 CYP2D6P10635 497 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 SKILP12757 684 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 SYKP43405 635 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 NLRP12P59046 1061 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 NR5A1Q13285 461 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 CLIC6Q96NY7 704 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 USP27XA6NNY8 438 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 CUTAO60888 179 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 IGSF3O75054 1194 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 CALM1P0DP23 149 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 CALM2P0DP24 149 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 CALM3P0DP25 149 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 PKN1Q16512 942 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 RESP18Q5W5W9 173 aa20.17■□□□□ 0.82
ERCC2-211ENST00000588652 RBM28Q9NW13 759 aaKnown RBP20.17■□□□□ 0.82
ERCC2-211ENST00000588652 BIN1O00499 593 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 AKAP17AQ02040 695 aaKnown RBP20.16■□□□□ 0.82
ERCC2-211ENST00000588652 RILPL1Q5EBL4 403 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 C15orf52Q6ZUT6 534 aaKnown RBP20.16■□□□□ 0.82
ERCC2-211ENST00000588652 ZNF804AQ7Z570 1209 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 SHISA4Q96DD7 197 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 NMT2O60551 498 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 DDAH1O94760 285 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 PLEKHA8P1O95397 391 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 SERPINB2P05120 415 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 TPM4P67936 248 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 FAM47AQ5JRC9 791 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 GPR101Q96P66 508 aaPredicted RBP20.16■□□□□ 0.82
ERCC2-211ENST00000588652 MCM9Q9NXL9 1143 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 MKRN1Q9UHC7 482 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms