RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 PRC1O43663 620 aa26.66■■□□□ 1.86
ACTN4-210ENST00000588618 AK2P54819 239 aa26.66■■□□□ 1.86
ACTN4-210ENST00000588618 FAM47AQ5JRC9 791 aa26.66■■□□□ 1.86
ACTN4-210ENST00000588618 CDC37L1Q7L3B6 337 aa26.66■■□□□ 1.86
ACTN4-210ENST00000588618 MIGA2Q7L4E1 593 aa26.66■■□□□ 1.86
ACTN4-210ENST00000588618 IQCA1Q86XH1 822 aa26.66■■□□□ 1.86
ACTN4-210ENST00000588618 TOB2Q14106 344 aaPredicted RBP26.65■■□□□ 1.86
ACTN4-210ENST00000588618 DCAF15Q66K64 600 aa26.65■■□□□ 1.86
ACTN4-210ENST00000588618 LDHDQ86WU2 507 aa26.65■■□□□ 1.86
ACTN4-210ENST00000588618 LARP6Q9BRS8 491 aaKnown RBP26.65■■□□□ 1.86
ACTN4-210ENST00000588618 UBAC1Q9BSL1 405 aa26.65■■□□□ 1.86
ACTN4-210ENST00000588618 GPBP1L1Q9HC44 474 aaPredicted RBP26.65■■□□□ 1.86
ACTN4-210ENST00000588618 GREB1LQ9C091 1923 aaPredicted RBP26.65■■□□□ 1.86
ACTN4-210ENST00000588618 ERICH2A1L162 156 aa26.65■■□□□ 1.86
ACTN4-210ENST00000588618 ADM5C9JUS6 153 aa26.65■■□□□ 1.86
ACTN4-210ENST00000588618 TBC1D12O60347 775 aa26.65■■□□□ 1.86
ACTN4-210ENST00000588618 TFAP4Q01664 338 aa26.65■■□□□ 1.86
ACTN4-210ENST00000588618 NBPF12Q5TAG4 269 aaPredicted RBP26.65■■□□□ 1.86
ACTN4-210ENST00000588618 PRAMEF18Q5VWM3 479 aa26.65■■□□□ 1.86
ACTN4-210ENST00000588618 DLK2Q6UY11 383 aa26.65■■□□□ 1.86
ACTN4-210ENST00000588618 Q6ZUG5 572 aa26.65■■□□□ 1.86
ACTN4-210ENST00000588618 TBC1D2Q9BYX2 928 aa26.65■■□□□ 1.86
ACTN4-210ENST00000588618 POTEIP0CG38 1075 aa26.64■■□□□ 1.85
ACTN4-210ENST00000588618 POTEJP0CG39 1038 aa26.64■■□□□ 1.85
ACTN4-210ENST00000588618 CERKLQ49MI3 558 aaPredicted RBP26.64■■□□□ 1.85
ACTN4-210ENST00000588618 USP48Q86UV5 1035 aa26.64■■□□□ 1.85
ACTN4-210ENST00000588618 SNX21Q969T3 373 aa26.64■■□□□ 1.85
ACTN4-210ENST00000588618 ZKSCAN3Q9BRR0 538 aa26.64■■□□□ 1.85
ACTN4-210ENST00000588618 WDR19Q8NEZ3 1342 aa26.64■■□□□ 1.85
ACTN4-210ENST00000588618 NOL8Q76FK4 1167 aaKnown RBP26.63■■□□□ 1.85
ACTN4-210ENST00000588618 CCDC17Q96LX7 622 aa26.63■■□□□ 1.85
ACTN4-210ENST00000588618 AGXT2Q9BYV1 514 aa26.63■■□□□ 1.85
ACTN4-210ENST00000588618 MPHOSPH10O00566 681 aaKnown RBP26.62■■□□□ 1.85
ACTN4-210ENST00000588618 NF2P35240 595 aa26.62■■□□□ 1.85
ACTN4-210ENST00000588618 RRP1BQ14684 758 aaKnown RBP26.62■■□□□ 1.85
ACTN4-210ENST00000588618 TATDN1Q6P1N9 297 aa26.62■■□□□ 1.85
ACTN4-210ENST00000588618 TMEM87BQ96K49 555 aa26.62■■□□□ 1.85
ACTN4-210ENST00000588618 ALDH8A1Q9H2A2 487 aaPredicted RBP26.62■■□□□ 1.85
ACTN4-210ENST00000588618 SENP2Q9HC62 589 aa26.62■■□□□ 1.85
ACTN4-210ENST00000588618 NMT2O60551 498 aa26.62■■□□□ 1.85
ACTN4-210ENST00000588618 ANKRD1Q15327 319 aa26.62■■□□□ 1.85
ACTN4-210ENST00000588618 SHROOM1Q2M3G4 852 aaPredicted RBP26.62■■□□□ 1.85
ACTN4-210ENST00000588618 IGDCC4Q8TDY8 1250 aa26.62■■□□□ 1.85
ACTN4-210ENST00000588618 SSC5DA1L4H1 1573 aa26.61■■□□□ 1.85
ACTN4-210ENST00000588618 IFIT3O14879 490 aaKnown RBP26.61■■□□□ 1.85
ACTN4-210ENST00000588618 MAP1SQ66K74 1059 aaPredicted RBP26.61■■□□□ 1.85
ACTN4-210ENST00000588618 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.61■■□□□ 1.85
ACTN4-210ENST00000588618 GLIS2Q9BZE0 524 aaPredicted RBP26.61■■□□□ 1.85
ACTN4-210ENST00000588618 AKR1B1P15121 316 aa26.6■■□□□ 1.85
ACTN4-210ENST00000588618 MAP3K10Q02779 954 aa26.6■■□□□ 1.85
ACTN4-210ENST00000588618 TMEM67Q5HYA8 995 aa26.6■■□□□ 1.85
ACTN4-210ENST00000588618 MTA3Q9BTC8 594 aa26.6■■□□□ 1.85
ACTN4-210ENST00000588618 CABP5Q9NP86 173 aa26.6■■□□□ 1.85
ACTN4-210ENST00000588618 IL17RBQ9NRM6 502 aa26.6■■□□□ 1.85
ACTN4-210ENST00000588618 SH2B2O14492 632 aaPredicted RBP26.59■■□□□ 1.85
ACTN4-210ENST00000588618 CCDC178Q5BJE1 867 aa26.59■■□□□ 1.85
ACTN4-210ENST00000588618 FBXL16Q8N461 479 aa26.59■■□□□ 1.85
ACTN4-210ENST00000588618 BRF1Q92994 677 aa26.59■■□□□ 1.85
ACTN4-210ENST00000588618 ZSCAN10Q96SZ4 725 aaPredicted RBP26.59■■□□□ 1.85
ACTN4-210ENST00000588618 ZNF341Q9BYN7 854 aa26.59■■□□□ 1.85
ACTN4-210ENST00000588618 MCM2P49736 904 aa26.59■■□□□ 1.85
ACTN4-210ENST00000588618 HSCBQ8IWL3 235 aa26.59■■□□□ 1.85
ACTN4-210ENST00000588618 NEDD1Q8NHV4 660 aa26.59■■□□□ 1.85
ACTN4-210ENST00000588618 CDCA5Q96FF9 252 aa26.59■■□□□ 1.85
ACTN4-210ENST00000588618 PPP1R12BO60237 982 aaPredicted RBP26.58■■□□□ 1.85
ACTN4-210ENST00000588618 LARGE1O95461 756 aa26.58■■□□□ 1.85
ACTN4-210ENST00000588618 JAG1P78504 1218 aa26.58■■□□□ 1.85
ACTN4-210ENST00000588618 SEC23AQ15436 765 aa26.58■■□□□ 1.85
ACTN4-210ENST00000588618 ABCB5Q2M3G0 1257 aa26.58■■□□□ 1.85
ACTN4-210ENST00000588618 LY9Q9HBG7 655 aa26.58■■□□□ 1.85
ACTN4-210ENST00000588618 TPCN1Q9ULQ1 816 aa26.58■■□□□ 1.85
ACTN4-210ENST00000588618 ANGEL1Q9UNK9 670 aaKnown RBP26.58■■□□□ 1.85
ACTN4-210ENST00000588618 TNKSO95271 1327 aa26.58■■□□□ 1.85
ACTN4-210ENST00000588618 PLIN4Q96Q06 1357 aa26.58■■□□□ 1.85
ACTN4-210ENST00000588618 ATAD5Q96QE3 1844 aa26.58■■□□□ 1.85
ACTN4-210ENST00000588618 GDF11O95390 407 aa26.57■■□□□ 1.84
ACTN4-210ENST00000588618 WTAPQ15007 396 aa26.57■■□□□ 1.84
ACTN4-210ENST00000588618 ENAHQ8N8S7 591 aaPredicted RBP26.57■■□□□ 1.84
ACTN4-210ENST00000588618 APOBRQ0VD83 1088 aa26.56■■□□□ 1.84
ACTN4-210ENST00000588618 NFXL1Q6ZNB6 911 aa26.56■■□□□ 1.84
ACTN4-210ENST00000588618 TMEM179Q6ZVK1 233 aa26.56■■□□□ 1.84
ACTN4-210ENST00000588618 SLC4A3P48751 1232 aa26.56■■□□□ 1.84
ACTN4-210ENST00000588618 BECN1Q14457 450 aa26.56■■□□□ 1.84
ACTN4-210ENST00000588618 PPP4R3BQ5MIZ7 849 aa26.56■■□□□ 1.84
ACTN4-210ENST00000588618 RCSD1Q6JBY9 416 aa26.56■■□□□ 1.84
ACTN4-210ENST00000588618 TMTC2Q8N394 836 aa26.56■■□□□ 1.84
ACTN4-210ENST00000588618 TCP11L1Q9NUJ3 509 aa26.56■■□□□ 1.84
ACTN4-210ENST00000588618 STX8Q9UNK0 236 aa26.56■■□□□ 1.84
ACTN4-210ENST00000588618 FZD1Q9UP38 647 aa26.56■■□□□ 1.84
ACTN4-210ENST00000588618 K7ELQ4 463 aaPredicted RBP26.55■■□□□ 1.84
ACTN4-210ENST00000588618 PRKG1Q13976 671 aa26.55■■□□□ 1.84
ACTN4-210ENST00000588618 IFIT1BQ5T764 474 aaKnown RBP26.55■■□□□ 1.84
ACTN4-210ENST00000588618 CLEC10AQ8IUN9 316 aa26.55■■□□□ 1.84
ACTN4-210ENST00000588618 BRPF3Q9ULD4 1205 aa26.55■■□□□ 1.84
ACTN4-210ENST00000588618 NAP1L2Q9ULW6 460 aaPredicted RBP26.55■■□□□ 1.84
ACTN4-210ENST00000588618 IGKV6D-41A0A0C4DH26 115 aa26.54■■□□□ 1.84
ACTN4-210ENST00000588618 CCDC69A6NI79 296 aa26.54■■□□□ 1.84
ACTN4-210ENST00000588618 PHF20L1A8MW92 1017 aa26.54■■□□□ 1.84
ACTN4-210ENST00000588618 CAP2P40123 477 aa26.54■■□□□ 1.84
ACTN4-210ENST00000588618 RAB3GAP1Q15042 981 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms