RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 TBC1D10CQ8IV04 446 aa16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 KRI1Q8N9T8 703 aaKnown RBP16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 KIF18AQ8NI77 898 aa16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 FEZ1Q99689 392 aa16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 CGNQ9P2M7 1197 aaKnown RBP16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 HPSEQ9Y251 543 aa16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 ZBTB1Q9Y2K1 713 aa16.15■□□□□ 0.18
NEDD4L-223ENST00000588516 SFPQP23246 707 aaKnown RBP eCLIP16.14■□□□□ 0.17
NEDD4L-223ENST00000588516 TDO2P48775 406 aa16.14■□□□□ 0.17
NEDD4L-223ENST00000588516 AKAP17AQ02040 695 aaKnown RBP16.14■□□□□ 0.17
NEDD4L-223ENST00000588516 WTAPQ15007 396 aa16.14■□□□□ 0.17
NEDD4L-223ENST00000588516 RTN1Q16799 776 aa16.14■□□□□ 0.17
NEDD4L-223ENST00000588516 MAGEB6Q8N7X4 407 aa16.14■□□□□ 0.17
NEDD4L-223ENST00000588516 BCL2L12Q9HB09 334 aa16.14■□□□□ 0.17
NEDD4L-223ENST00000588516 LAMB2P55268 1798 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 MBD4O95243 580 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 SMC2O95347 1197 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 CALM1P0DP23 149 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 CALM2P0DP24 149 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 CALM3P0DP25 149 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 MYL5Q02045 173 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 LRMPQ12912 555 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 NTRK3Q16288 839 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 DPY19L2Q6NUT2 758 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 PI16Q6UXB8 463 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 MICU3Q86XE3 530 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 NOSTRINQ8IVI9 506 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 TRIML1Q8N9V2 468 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 ANKRD7Q92527 254 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 ABHD8Q96I13 439 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 NBPF3Q9H094 633 aa16.13■□□□□ 0.17
NEDD4L-223ENST00000588516 CNTNAP4Q9C0A0 1308 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 LBX1P52954 281 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 PTPAQ15257 358 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 CCDC144BQ3MJ40 725 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 OTUD7BQ6GQQ9 843 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 FILIP1Q7Z7B0 1213 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 FCHSD1Q86WN1 690 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 CCDC144CPQ8IYA2 1237 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 SMAP1Q8IYB5 467 aaPredicted RBP16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 CCAR2Q8N163 923 aaKnown RBP16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 ESR2Q92731 530 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 C16orf45Q96MC5 204 aaPredicted RBP16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 PYM1Q9BRP8 204 aaKnown RBP16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 UBAC1Q9BSL1 405 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 SLC26A6Q9BXS9 759 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 LRP2BPQ9P2M1 347 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 SRP68Q9UHB9 627 aaKnown RBP16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 ANAPC4Q9UJX5 808 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 SLC4A4Q9Y6R1 1079 aa16.12■□□□□ 0.17
NEDD4L-223ENST00000588516 KIF28PB7ZC32 967 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 SEMA3EO15041 775 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 MMP1P03956 469 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 MLLT1Q03111 559 aaPredicted RBP16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 DDR1Q08345 913 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 CHADLQ6NUI6 762 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 CLEC4GQ6UXB4 293 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 MLKLQ8NB16 471 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 CNNM3Q8NE01 707 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 MAP3K14Q99558 947 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 BRMS1Q9HCU9 246 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 RBM28Q9NW13 759 aaKnown RBP16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 KCNH3Q9ULD8 1083 aa16.11■□□□□ 0.17
NEDD4L-223ENST00000588516 GOLGA6L9A6NEM1 432 aa16.1■□□□□ 0.17
NEDD4L-223ENST00000588516 GSG1L2A8MUP6 293 aa16.1■□□□□ 0.17
NEDD4L-223ENST00000588516 POTECB2RU33 542 aa16.1■□□□□ 0.17
NEDD4L-223ENST00000588516 RASGRF1Q13972 1273 aa16.1■□□□□ 0.17
NEDD4L-223ENST00000588516 UBE4AQ14139 1066 aa16.1■□□□□ 0.17
NEDD4L-223ENST00000588516 DPCR1Q3MIW9 517 aa16.1■□□□□ 0.17
NEDD4L-223ENST00000588516 KRBA2Q6ZNG9 492 aa16.1■□□□□ 0.17
NEDD4L-223ENST00000588516 NYAP1Q6ZVC0 841 aa16.1■□□□□ 0.17
NEDD4L-223ENST00000588516 IFNKQ9P0W0 207 aa16.1■□□□□ 0.17
NEDD4L-223ENST00000588516 CNTNAP1P78357 1384 aa16.1■□□□□ 0.17
NEDD4L-223ENST00000588516 NEDD4P46934 1319 aa16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 UBN2Q6ZU65 1347 aa16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 CDC27P30260 824 aa16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 CCZ1BP86790 482 aa16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 CCZ1P86791 482 aaPredicted RBP16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 FANCCQ00597 558 aa16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 CAVIN4Q5BKX8 364 aa16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 SUSD4Q5VX71 490 aa16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 TMC6Q7Z403 805 aa16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 SYNE4Q8N205 404 aa16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 RNF26Q9BY78 433 aaPredicted RBP16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 XPO4Q9C0E2 1151 aaKnown RBP16.09■□□□□ 0.17
NEDD4L-223ENST00000588516 BCORQ6W2J9 1755 aa16.08■□□□□ 0.17
NEDD4L-223ENST00000588516 CCDC85CA6NKD9 419 aa16.08■□□□□ 0.16
NEDD4L-223ENST00000588516 ZBTB22O15209 634 aa16.08■□□□□ 0.16
NEDD4L-223ENST00000588516 ZSCAN12O43309 604 aa16.08■□□□□ 0.16
NEDD4L-223ENST00000588516 WDHD1O75717 1129 aaPredicted RBP16.08■□□□□ 0.16
NEDD4L-223ENST00000588516 SERPINC1P01008 464 aa16.08■□□□□ 0.16
NEDD4L-223ENST00000588516 PRKCSHP14314 528 aaPredicted RBP16.08■□□□□ 0.16
NEDD4L-223ENST00000588516 MARCKSP29966 332 aaPredicted RBP16.08■□□□□ 0.16
NEDD4L-223ENST00000588516 CRACR2BQ8N4Y2 399 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms