RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 NKX2-3Q8TAU0 364 aa19.04■□□□□ 0.64
NLE1-204ENST00000588019 IGDCC4Q8TDY8 1250 aa19.04■□□□□ 0.64
NLE1-204ENST00000588019 ZC3H15Q8WU90 426 aaKnown RBP19.04■□□□□ 0.64
NLE1-204ENST00000588019 HOOK2Q96ED9 719 aa19.04■□□□□ 0.64
NLE1-204ENST00000588019 ZSCAN10Q96SZ4 725 aaPredicted RBP19.04■□□□□ 0.64
NLE1-204ENST00000588019 DEFB129Q9H1M3 183 aa19.04■□□□□ 0.64
NLE1-204ENST00000588019 SH2B1Q9NRF2 756 aaPredicted RBP19.04■□□□□ 0.64
NLE1-204ENST00000588019 TCP11L1Q9NUJ3 509 aa19.04■□□□□ 0.64
NLE1-204ENST00000588019 TBC1D12O60347 775 aa19.03■□□□□ 0.64
NLE1-204ENST00000588019 SHMT1P34896 483 aa19.03■□□□□ 0.64
NLE1-204ENST00000588019 WTAPQ15007 396 aa19.03■□□□□ 0.64
NLE1-204ENST00000588019 FAM47AQ5JRC9 791 aa19.03■□□□□ 0.64
NLE1-204ENST00000588019 PNMA8AQ86V59 439 aaPredicted RBP19.03■□□□□ 0.64
NLE1-204ENST00000588019 NEDD1Q8NHV4 660 aa19.03■□□□□ 0.64
NLE1-204ENST00000588019 DCPSQ96C86 337 aaKnown RBP19.03■□□□□ 0.64
NLE1-204ENST00000588019 TMX3Q96JJ7 454 aa19.03■□□□□ 0.64
NLE1-204ENST00000588019 TAF1DQ9H5J8 278 aaPredicted RBP19.03■□□□□ 0.64
NLE1-204ENST00000588019 PGAP2Q9UHJ9 254 aa19.03■□□□□ 0.64
NLE1-204ENST00000588019 EVCP57679 992 aa19.02■□□□□ 0.64
NLE1-204ENST00000588019 TATDN1Q6P1N9 297 aa19.02■□□□□ 0.64
NLE1-204ENST00000588019 ZNF274Q96GC6 653 aaPredicted RBP19.02■□□□□ 0.64
NLE1-204ENST00000588019 TEPSINQ96N21 525 aa19.02■□□□□ 0.64
NLE1-204ENST00000588019 ZKSCAN3Q9BRR0 538 aa19.02■□□□□ 0.64
NLE1-204ENST00000588019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.02■□□□□ 0.64
NLE1-204ENST00000588019 TPCN1Q9ULQ1 816 aa19.02■□□□□ 0.64
NLE1-204ENST00000588019 WDR90Q96KV7 1748 aa19.02■□□□□ 0.63
NLE1-204ENST00000588019 TNKSO95271 1327 aa19.01■□□□□ 0.63
NLE1-204ENST00000588019 MAP3K10Q02779 954 aa19.01■□□□□ 0.63
NLE1-204ENST00000588019 CERKLQ49MI3 558 aaPredicted RBP19.01■□□□□ 0.63
NLE1-204ENST00000588019 PPP4R3BQ5MIZ7 849 aa19.01■□□□□ 0.63
NLE1-204ENST00000588019 NFXL1Q6ZNB6 911 aa19.01■□□□□ 0.63
NLE1-204ENST00000588019 SGMS1Q86VZ5 419 aa19.01■□□□□ 0.63
NLE1-204ENST00000588019 DGKHQ86XP1 1220 aa19.01■□□□□ 0.63
NLE1-204ENST00000588019 CHMP4CQ96CF2 233 aa19.01■□□□□ 0.63
NLE1-204ENST00000588019 LARP6Q9BRS8 491 aaKnown RBP19.01■□□□□ 0.63
NLE1-204ENST00000588019 DNAJC18Q9H819 358 aa19.01■□□□□ 0.63
NLE1-204ENST00000588019 LY9Q9HBG7 655 aa19.01■□□□□ 0.63
NLE1-204ENST00000588019 SCN4AP35499 1836 aa19■□□□□ 0.63
NLE1-204ENST00000588019 CCDC69A6NI79 296 aa19■□□□□ 0.63
NLE1-204ENST00000588019 POTECB2RU33 542 aa19■□□□□ 0.63
NLE1-204ENST00000588019 HSP90AA1P07900 732 aaKnown RBP19■□□□□ 0.63
NLE1-204ENST00000588019 APOBRQ0VD83 1088 aa19■□□□□ 0.63
NLE1-204ENST00000588019 SEC23AQ15436 765 aa19■□□□□ 0.63
NLE1-204ENST00000588019 SYNE3Q6ZMZ3 975 aa19■□□□□ 0.63
NLE1-204ENST00000588019 SULF1Q8IWU6 871 aa19■□□□□ 0.63
NLE1-204ENST00000588019 GPHNQ9NQX3 736 aaPredicted RBP19■□□□□ 0.63
NLE1-204ENST00000588019 PLIN4Q96Q06 1357 aa19■□□□□ 0.63
NLE1-204ENST00000588019 KLF18A0A0U1RQI7 1052 aa18.99■□□□□ 0.63
NLE1-204ENST00000588019 VEGFAP15692 232 aaPredicted RBP18.99■□□□□ 0.63
NLE1-204ENST00000588019 SLC4A3P48751 1232 aa18.99■□□□□ 0.63
NLE1-204ENST00000588019 CUL4AQ13619 759 aa18.99■□□□□ 0.63
NLE1-204ENST00000588019 ME3Q16798 604 aa18.99■□□□□ 0.63
NLE1-204ENST00000588019 IFIT1BQ5T764 474 aaKnown RBP18.99■□□□□ 0.63
NLE1-204ENST00000588019 DCAF15Q66K64 600 aa18.99■□□□□ 0.63
NLE1-204ENST00000588019 ENAHQ8N8S7 591 aaPredicted RBP18.99■□□□□ 0.63
NLE1-204ENST00000588019 ANKS1AQ92625 1134 aa18.99■□□□□ 0.63
NLE1-204ENST00000588019 GOLGB1Q14789 3259 aaKnown RBP18.98■□□□□ 0.63
NLE1-204ENST00000588019 FAM196BA6NMK8 535 aa18.98■□□□□ 0.63
NLE1-204ENST00000588019 AKR1B1P15121 316 aa18.98■□□□□ 0.63
NLE1-204ENST00000588019 SUPT20HL1Q3ZLR7 823 aa18.98■□□□□ 0.63
NLE1-204ENST00000588019 SLKQ9H2G2 1235 aaPredicted RBP18.98■□□□□ 0.63
NLE1-204ENST00000588019 CABP5Q9NP86 173 aa18.98■□□□□ 0.63
NLE1-204ENST00000588019 IL17RBQ9NRM6 502 aa18.98■□□□□ 0.63
NLE1-204ENST00000588019 NAP1L2Q9ULW6 460 aaPredicted RBP18.98■□□□□ 0.63
NLE1-204ENST00000588019 SCAF8Q9UPN6 1271 aaKnown RBP18.98■□□□□ 0.63
NLE1-204ENST00000588019 SLC12A7Q9Y666 1083 aa18.98■□□□□ 0.63
NLE1-204ENST00000588019 SIPA1L1O43166 1804 aa18.97■□□□□ 0.63
NLE1-204ENST00000588019 MPHOSPH10O00566 681 aaKnown RBP18.97■□□□□ 0.63
NLE1-204ENST00000588019 PFKFB2O60825 505 aa18.97■□□□□ 0.63
NLE1-204ENST00000588019 PDIA3P30101 505 aaKnown RBP18.97■□□□□ 0.63
NLE1-204ENST00000588019 RCAN1P53805 252 aa18.97■□□□□ 0.63
NLE1-204ENST00000588019 ABCB5Q2M3G0 1257 aa18.97■□□□□ 0.63
NLE1-204ENST00000588019 EAPPQ56P03 285 aaPredicted RBP18.97■□□□□ 0.63
NLE1-204ENST00000588019 TMEM179Q6ZVK1 233 aa18.97■□□□□ 0.63
NLE1-204ENST00000588019 CDAN1Q8IWY9 1227 aa18.97■□□□□ 0.63
NLE1-204ENST00000588019 INTS4Q96HW7 963 aaKnown RBP18.97■□□□□ 0.63
NLE1-204ENST00000588019 BRPF3Q9ULD4 1205 aa18.97■□□□□ 0.63
NLE1-204ENST00000588019 IGKV6D-41A0A0C4DH26 115 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 GOLGA8BA8MQT2 603 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 ZBTB43O43298 467 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 NMT2O60551 498 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 LARGE1O95461 756 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 SLURP2P0DP57 97 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 NOVP48745 357 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 NBPF12Q5TAG4 269 aaPredicted RBP18.96■□□□□ 0.63
NLE1-204ENST00000588019 APOA5Q6Q788 366 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 MIGA2Q7L4E1 593 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 KRT26Q7Z3Y9 468 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 CATIPQ7Z7H3 387 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.96■□□□□ 0.63
NLE1-204ENST00000588019 KAT14Q9H8E8 782 aa18.96■□□□□ 0.63
NLE1-204ENST00000588019 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.96■□□□□ 0.63
NLE1-204ENST00000588019 DHX16O60231 1041 aaKnown RBP18.95■□□□□ 0.62
NLE1-204ENST00000588019 CALM1P0DP23 149 aa18.95■□□□□ 0.62
NLE1-204ENST00000588019 CALM2P0DP24 149 aa18.95■□□□□ 0.62
NLE1-204ENST00000588019 CALM3P0DP25 149 aa18.95■□□□□ 0.62
NLE1-204ENST00000588019 STK3Q13188 491 aa18.95■□□□□ 0.62
NLE1-204ENST00000588019 RCSD1Q6JBY9 416 aa18.95■□□□□ 0.62
NLE1-204ENST00000588019 GTF3C6Q969F1 213 aa18.95■□□□□ 0.62
NLE1-204ENST00000588019 CEP95Q96GE4 821 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms