RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 EDC3Q96F86 508 aaKnown RBP17.44■□□□□ 0.38
VMP1-206ENST00000587945 DNAJC2Q99543 621 aaKnown RBP17.44■□□□□ 0.38
VMP1-206ENST00000587945 RIOK1Q9BRS2 568 aaKnown RBP17.44■□□□□ 0.38
VMP1-206ENST00000587945 RNF208Q9H0X6 261 aa17.44■□□□□ 0.38
VMP1-206ENST00000587945 TMOD4Q9NZQ9 345 aa17.44■□□□□ 0.38
VMP1-206ENST00000587945 PHIPQ8WWQ0 1821 aa17.43■□□□□ 0.38
VMP1-206ENST00000587945 GOLIM4O00461 696 aa17.43■□□□□ 0.38
VMP1-206ENST00000587945 GH2P01242 217 aa17.43■□□□□ 0.38
VMP1-206ENST00000587945 PDE6AP16499 860 aa17.43■□□□□ 0.38
VMP1-206ENST00000587945 GCLCP48506 637 aaPredicted RBP17.43■□□□□ 0.38
VMP1-206ENST00000587945 SLC9C2Q5TAH2 1124 aa17.43■□□□□ 0.38
VMP1-206ENST00000587945 COA7Q96BR5 231 aa17.43■□□□□ 0.38
VMP1-206ENST00000587945 P2RX7Q99572 595 aaKnown RBP17.43■□□□□ 0.38
VMP1-206ENST00000587945 UNC93B1Q9H1C4 597 aa17.43■□□□□ 0.38
VMP1-206ENST00000587945 MAST2Q6P0Q8 1798 aa17.43■□□□□ 0.38
VMP1-206ENST00000587945 MAGEB6P1A0A0J9YX57 407 aa17.42■□□□□ 0.38
VMP1-206ENST00000587945 USP17L10C9JJH3 530 aa17.42■□□□□ 0.38
VMP1-206ENST00000587945 RAB11FIP3O75154 756 aa17.42■□□□□ 0.38
VMP1-206ENST00000587945 GJB1P08034 283 aa17.42■□□□□ 0.38
VMP1-206ENST00000587945 PLCD1P51178 756 aa17.42■□□□□ 0.38
VMP1-206ENST00000587945 IRX3P78415 501 aaPredicted RBP17.42■□□□□ 0.38
VMP1-206ENST00000587945 TTF1Q15361 905 aaPredicted RBP17.42■□□□□ 0.38
VMP1-206ENST00000587945 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
VMP1-206ENST00000587945 GINM1Q9NU53 330 aa17.42■□□□□ 0.38
VMP1-206ENST00000587945 C19orf81C9J6K1 198 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 INHAP05111 366 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 GJA8P48165 433 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 EVX2Q03828 476 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 IRF5Q13568 498 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 SLFNL1Q499Z3 407 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 TATDN1Q6P1N9 297 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.41■□□□□ 0.38
VMP1-206ENST00000587945 BOLA2Q9H3K6 86 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 EMILIN3Q9NT22 766 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 SERPINB13Q9UIV8 391 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 SIPA1L1O43166 1804 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 ZNF532Q9HCE3 1301 aa17.41■□□□□ 0.38
VMP1-206ENST00000587945 HOXA7P31268 230 aaPredicted RBP17.4■□□□□ 0.38
VMP1-206ENST00000587945 ZYXQ15942 572 aaKnown RBP17.4■□□□□ 0.38
VMP1-206ENST00000587945 TTC6Q86TZ1 520 aa17.4■□□□□ 0.38
VMP1-206ENST00000587945 NKX2-3Q8TAU0 364 aa17.4■□□□□ 0.38
VMP1-206ENST00000587945 PXYLP1Q8TE99 480 aa17.4■□□□□ 0.38
VMP1-206ENST00000587945 U2AF1L4Q8WU68 220 aaKnown RBP17.4■□□□□ 0.38
VMP1-206ENST00000587945 EHD4Q9H223 541 aa17.4■□□□□ 0.38
VMP1-206ENST00000587945 TXNRD2Q9NNW7 524 aa17.4■□□□□ 0.38
VMP1-206ENST00000587945 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
VMP1-206ENST00000587945 PTPRFP10586 1907 aa17.39■□□□□ 0.37
VMP1-206ENST00000587945 TCRBV5S4A2TA0A5A2 114 aa17.39■□□□□ 0.37
VMP1-206ENST00000587945 POLR3DP05423 398 aaPredicted RBP17.39■□□□□ 0.37
VMP1-206ENST00000587945 HERVK_113P62684 666 aa17.39■□□□□ 0.37
VMP1-206ENST00000587945 RAB3GAP1Q15042 981 aa17.39■□□□□ 0.37
VMP1-206ENST00000587945 CERKLQ49MI3 558 aaPredicted RBP17.39■□□□□ 0.37
VMP1-206ENST00000587945 TMED8Q6PL24 325 aaPredicted RBP17.39■□□□□ 0.37
VMP1-206ENST00000587945 LCORLQ8N3X6 602 aa17.39■□□□□ 0.37
VMP1-206ENST00000587945 SDR42E1Q8WUS8 393 aa17.39■□□□□ 0.37
VMP1-206ENST00000587945 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
VMP1-206ENST00000587945 MORF4L1Q9UBU8 362 aa17.39■□□□□ 0.37
VMP1-206ENST00000587945 GJD2Q9UKL4 321 aa17.39■□□□□ 0.37
VMP1-206ENST00000587945 MYO5AQ9Y4I1 1855 aaKnown RBP17.38■□□□□ 0.37
VMP1-206ENST00000587945 SMARCA5O60264 1052 aaPredicted RBP17.38■□□□□ 0.37
VMP1-206ENST00000587945 CHGBP05060 677 aa17.38■□□□□ 0.37
VMP1-206ENST00000587945 SHMT1P34896 483 aa17.38■□□□□ 0.37
VMP1-206ENST00000587945 USP17L2Q6R6M4 530 aa17.38■□□□□ 0.37
VMP1-206ENST00000587945 ACER1Q8TDN7 264 aa17.38■□□□□ 0.37
VMP1-206ENST00000587945 GCC1Q96CN9 775 aa17.38■□□□□ 0.37
VMP1-206ENST00000587945 CRNKL1Q9BZJ0 848 aaKnown RBP17.38■□□□□ 0.37
VMP1-206ENST00000587945 PAG1Q9NWQ8 432 aa17.38■□□□□ 0.37
VMP1-206ENST00000587945 H0YGN5 161 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 SGPL1O95470 568 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 CYP2D6P10635 497 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 ATP5JP18859 108 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 PDE3AQ14432 1141 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 ABCB5Q2M3G0 1257 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 Q3C1V9 767 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 POTEEQ6S8J3 1075 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 UBE2Q1Q7Z7E8 422 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 GPRC5AQ8NFJ5 357 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 DEFB118Q96PH6 123 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 FEZ1Q99689 392 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 ARMT1Q9H993 441 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 MCM9Q9NXL9 1143 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 RBPJLQ9UBG7 517 aa17.37■□□□□ 0.37
VMP1-206ENST00000587945 LOC285556D6RIA3 1793 aa17.36■□□□□ 0.37
VMP1-206ENST00000587945 GABPAQ06546 454 aa17.36■□□□□ 0.37
VMP1-206ENST00000587945 TRIM32Q13049 653 aa17.36■□□□□ 0.37
VMP1-206ENST00000587945 HABP4Q5JVS0 413 aaKnown RBP17.36■□□□□ 0.37
VMP1-206ENST00000587945 DPF3Q92784 378 aa17.36■□□□□ 0.37
VMP1-206ENST00000587945 PAGR1Q9BTK6 254 aa17.36■□□□□ 0.37
VMP1-206ENST00000587945 DCP1AQ9NPI6 582 aaPredicted RBP17.36■□□□□ 0.37
VMP1-206ENST00000587945 PRKAB2O43741 272 aa17.35■□□□□ 0.37
VMP1-206ENST00000587945 FARP2O94887 1054 aaPredicted RBP17.35■□□□□ 0.37
VMP1-206ENST00000587945 TFRCP02786 760 aaKnown RBP17.35■□□□□ 0.37
VMP1-206ENST00000587945 CYP2B6P20813 491 aa17.35■□□□□ 0.37
VMP1-206ENST00000587945 GUCY1A2P33402 732 aa17.35■□□□□ 0.37
VMP1-206ENST00000587945 ADD2P35612 726 aa17.35■□□□□ 0.37
VMP1-206ENST00000587945 SLC44A5Q8NCS7 719 aa17.35■□□□□ 0.37
VMP1-206ENST00000587945 C12orf42Q96LP6 360 aa17.35■□□□□ 0.37
VMP1-206ENST00000587945 HAUS7Q99871 368 aa17.35■□□□□ 0.37
VMP1-206ENST00000587945 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
VMP1-206ENST00000587945 PORCNQ9H237 461 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms