RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 HTATIP2Q9BUP3 242 aa7.87□□□□□ -1.15
SDF2-205ENST00000587629 TRIM34Q9BYJ4 488 aa7.87□□□□□ -1.15
SDF2-205ENST00000587629 CCDC8Q9H0W5 538 aaPredicted RBP7.87□□□□□ -1.15
SDF2-205ENST00000587629 BCL11AQ9H165 835 aa7.87□□□□□ -1.15
SDF2-205ENST00000587629 ASCC2Q9H1I8 757 aaPredicted RBP7.87□□□□□ -1.15
SDF2-205ENST00000587629 PIH1D3Q9NQM4 214 aaKnown RBP7.87□□□□□ -1.15
SDF2-205ENST00000587629 PI4KBQ9UBF8 816 aa7.87□□□□□ -1.15
SDF2-205ENST00000587629 PNMA3Q9UL41 463 aa7.87□□□□□ -1.15
SDF2-205ENST00000587629 NDUFB9Q9Y6M9 179 aa7.87□□□□□ -1.15
SDF2-205ENST00000587629 DOCK1Q14185 1865 aa7.86□□□□□ -1.15
SDF2-205ENST00000587629 EVI5O60447 810 aa7.86□□□□□ -1.15
SDF2-205ENST00000587629 MAP4K4O95819 1239 aaPredicted RBP7.86□□□□□ -1.15
SDF2-205ENST00000587629 DYNLL1P63167 89 aaKnown RBP7.86□□□□□ -1.15
SDF2-205ENST00000587629 ATP8B2P98198 1209 aa7.86□□□□□ -1.15
SDF2-205ENST00000587629 TRIM32Q13049 653 aa7.86□□□□□ -1.15
SDF2-205ENST00000587629 PABPC4Q13310 644 aaKnown RBP eCLIP7.86□□□□□ -1.155e-6■□□□□ 10.8
SDF2-205ENST00000587629 FAM110CQ1W6H9 321 aa7.86□□□□□ -1.15
SDF2-205ENST00000587629 ITPRIPQ8IWB1 547 aa7.86□□□□□ -1.15
SDF2-205ENST00000587629 MIGA1Q8NAN2 632 aa7.86□□□□□ -1.15
SDF2-205ENST00000587629 PROCA1Q8NCQ7 364 aaPredicted RBP7.86□□□□□ -1.15
SDF2-205ENST00000587629 PXYLP1Q8TE99 480 aa7.86□□□□□ -1.15
SDF2-205ENST00000587629 DIS3LQ8TF46 1054 aaKnown RBP7.86□□□□□ -1.15
SDF2-205ENST00000587629 P2RX7Q99572 595 aaKnown RBP7.86□□□□□ -1.15
SDF2-205ENST00000587629 AS3MTQ9HBK9 375 aa7.86□□□□□ -1.15
SDF2-205ENST00000587629 TLR7Q9NYK1 1049 aaKnown RBP7.86□□□□□ -1.15
SDF2-205ENST00000587629 TMOD4Q9NZQ9 345 aa7.86□□□□□ -1.15
SDF2-205ENST00000587629 HERC5Q9UII4 1024 aaKnown RBP7.86□□□□□ -1.15
SDF2-205ENST00000587629 NR2E3Q9Y5X4 410 aa7.86□□□□□ -1.15
SDF2-205ENST00000587629 PHIPQ8WWQ0 1821 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 FLT1P17948 1338 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 ZBTB7BO15156 539 aaPredicted RBP7.85□□□□□ -1.15
SDF2-205ENST00000587629 IDH1O75874 414 aaKnown RBP7.85□□□□□ -1.15
SDF2-205ENST00000587629 RLBP1P12271 317 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 PLCG2P16885 1265 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 CYP7A1P22680 504 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 GCLCP48506 637 aaPredicted RBP7.85□□□□□ -1.15
SDF2-205ENST00000587629 BACE1P56817 501 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 IRX3P78415 501 aaPredicted RBP7.85□□□□□ -1.15
SDF2-205ENST00000587629 HNRNPUQ00839 825 aaKnown RBP eCLIP7.85□□□□□ -1.15
SDF2-205ENST00000587629 IRF5Q13568 498 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 ZYXQ15942 572 aaKnown RBP7.85□□□□□ -1.15
SDF2-205ENST00000587629 FTSJ3Q8IY81 847 aaKnown RBP7.85□□□□□ -1.15
SDF2-205ENST00000587629 SSH3Q8TE77 659 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 PAWRQ96IZ0 340 aaKnown RBP7.85□□□□□ -1.15
SDF2-205ENST00000587629 DHX36Q9H2U1 1008 aaKnown RBP7.85□□□□□ -1.15
SDF2-205ENST00000587629 DNAJC18Q9H819 358 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 GPR108Q9NPR9 543 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 PAK6Q9NQU5 681 aaPredicted RBP7.85□□□□□ -1.15
SDF2-205ENST00000587629 DBNLQ9UJU6 430 aaKnown RBP7.85□□□□□ -1.15
SDF2-205ENST00000587629 GJD2Q9UKL4 321 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 MGAMO43451 1857 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 CEP290O15078 2479 aa7.85□□□□□ -1.15
SDF2-205ENST00000587629 COL2A1P02458 1487 aaPredicted RBP7.84□□□□□ -1.15
SDF2-205ENST00000587629 USP17L10C9JJH3 530 aa7.84□□□□□ -1.15
SDF2-205ENST00000587629 ASNSP08243 561 aa7.84□□□□□ -1.15
SDF2-205ENST00000587629 CYP2B6P20813 491 aa7.84□□□□□ -1.15
SDF2-205ENST00000587629 PPP4CP60510 307 aa7.84□□□□□ -1.15
SDF2-205ENST00000587629 SH3D19Q5HYK7 790 aa7.84□□□□□ -1.15
SDF2-205ENST00000587629 FOXP4Q8IVH2 680 aaPredicted RBP7.84□□□□□ -1.15
SDF2-205ENST00000587629 EAF2Q96CJ1 260 aaPredicted RBP7.84□□□□□ -1.15
SDF2-205ENST00000587629 PAGR1Q9BTK6 254 aa7.84□□□□□ -1.15
SDF2-205ENST00000587629 WDR18Q9BV38 432 aa7.84□□□□□ -1.15
SDF2-205ENST00000587629 TBC1D2Q9BYX2 928 aa7.84□□□□□ -1.15
SDF2-205ENST00000587629 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.84□□□□□ -1.15
SDF2-205ENST00000587629 TXNRD2Q9NNW7 524 aa7.84□□□□□ -1.15
SDF2-205ENST00000587629 STAP2Q9UGK3 403 aa7.84□□□□□ -1.15
SDF2-205ENST00000587629 ZBTB21Q9ULJ3 1066 aa7.84□□□□□ -1.15
SDF2-205ENST00000587629 PTPRFP10586 1907 aa7.84□□□□□ -1.16
SDF2-205ENST00000587629 APBB1O00213 710 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 GH2P01242 217 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 HMGCRP04035 888 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 HLA-DOAP06340 250 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 USP5P45974 858 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 HERVK_113P62684 666 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 RAB3GAP1Q15042 981 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 Q3C1V9 767 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 NECAB2Q7Z6G3 386 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 CCAR1Q8IX12 1150 aaKnown RBP7.83□□□□□ -1.16
SDF2-205ENST00000587629 C7orf61Q8IZ16 206 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 MAGEB6Q8N7X4 407 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 GPRC5AQ8NFJ5 357 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 TRIB2Q92519 343 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 CRISPLD2Q9H0B8 497 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 ANTXR1Q9H6X2 564 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 HMX1Q9NP08 348 aaPredicted RBP7.83□□□□□ -1.16
SDF2-205ENST00000587629 EMILIN3Q9NT22 766 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 RBPJLQ9UBG7 517 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 MORF4L1Q9UBU8 362 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 ZMYND8Q9ULU4 1186 aaPredicted RBP7.83□□□□□ -1.16
SDF2-205ENST00000587629 EXOC6BQ9Y2D4 811 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 SZT2Q5T011 3432 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 TRIOBPQ9H2D6 2365 aa7.83□□□□□ -1.16
SDF2-205ENST00000587629 RANBP2P49792 3224 aaKnown RBP7.82□□□□□ -1.16
SDF2-205ENST00000587629 RPTORQ8N122 1335 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 C19orf81C9J6K1 198 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 SYN1P17600 705 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 HOXA7P31268 230 aaPredicted RBP7.82□□□□□ -1.16
SDF2-205ENST00000587629 CCL14Q16627 93 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 POTEEQ6S8J3 1075 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 AACSQ86V21 672 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms