RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 ZKSCAN1P17029 563 aaPredicted RBP21.66■■□□□ 1.06
H3F3B-206ENST00000587560 NT5C2P49902 561 aa21.66■■□□□ 1.06
H3F3B-206ENST00000587560 RRP1BQ14684 758 aaKnown RBP21.66■■□□□ 1.06
H3F3B-206ENST00000587560 TM6SF1Q9BZW5 370 aa21.66■■□□□ 1.06
H3F3B-206ENST00000587560 RNF41Q9H4P4 317 aaPredicted RBP21.66■■□□□ 1.06
H3F3B-206ENST00000587560 UPF2Q9HAU5 1272 aaKnown RBP21.66■■□□□ 1.06
H3F3B-206ENST00000587560 ZNF112Q9UJU3 913 aa21.66■■□□□ 1.06
H3F3B-206ENST00000587560 OTOFQ9HC10 1997 aa21.66■■□□□ 1.06
H3F3B-206ENST00000587560 ATAD5Q96QE3 1844 aa21.66■■□□□ 1.06
H3F3B-206ENST00000587560 WDR33Q9C0J8 1336 aaKnown RBP21.65■■□□□ 1.06
H3F3B-206ENST00000587560 FAM196BA6NMK8 535 aa21.65■■□□□ 1.06
H3F3B-206ENST00000587560 SLC3A2P08195 630 aaKnown RBP21.65■■□□□ 1.06
H3F3B-206ENST00000587560 KRT32Q14532 448 aa21.65■■□□□ 1.06
H3F3B-206ENST00000587560 SUPT20HL1Q3ZLR7 823 aa21.65■■□□□ 1.06
H3F3B-206ENST00000587560 MFSD6Q6ZSS7 791 aa21.65■■□□□ 1.06
H3F3B-206ENST00000587560 MB21D2Q8IYB1 491 aaPredicted RBP21.65■■□□□ 1.06
H3F3B-206ENST00000587560 HOOK2Q96ED9 719 aa21.65■■□□□ 1.06
H3F3B-206ENST00000587560 PLIN4Q96Q06 1357 aa21.64■■□□□ 1.06
H3F3B-206ENST00000587560 PDE4BQ07343 736 aa21.64■■□□□ 1.05
H3F3B-206ENST00000587560 MIGA2Q7L4E1 593 aa21.64■■□□□ 1.05
H3F3B-206ENST00000587560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.64■■□□□ 1.05
H3F3B-206ENST00000587560 DOCK1Q14185 1865 aa21.63■■□□□ 1.05
H3F3B-206ENST00000587560 TRAF5O00463 557 aa21.63■■□□□ 1.05
H3F3B-206ENST00000587560 USP2O75604 605 aaPredicted RBP21.63■■□□□ 1.05
H3F3B-206ENST00000587560 FMR1Q06787 632 aaKnown RBP eCLIP21.63■■□□□ 1.05
H3F3B-206ENST00000587560 MAP3K11Q16584 847 aa21.63■■□□□ 1.05
H3F3B-206ENST00000587560 DEFB115Q30KQ5 88 aa21.63■■□□□ 1.05
H3F3B-206ENST00000587560 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.63■■□□□ 1.05
H3F3B-206ENST00000587560 CNNM2Q9H8M5 875 aa21.63■■□□□ 1.05
H3F3B-206ENST00000587560 ZSWIM6Q9HCJ5 1215 aa21.63■■□□□ 1.05
H3F3B-206ENST00000587560 PRDM1O75626 825 aa21.62■■□□□ 1.05
H3F3B-206ENST00000587560 ANTXR2P58335 489 aa21.62■■□□□ 1.05
H3F3B-206ENST00000587560 JAG1P78504 1218 aa21.62■■□□□ 1.05
H3F3B-206ENST00000587560 DCAF15Q66K64 600 aa21.62■■□□□ 1.05
H3F3B-206ENST00000587560 STK11IPQ8N1F8 1099 aa21.62■■□□□ 1.05
H3F3B-206ENST00000587560 CRACR2BQ8N4Y2 399 aaPredicted RBP21.62■■□□□ 1.05
H3F3B-206ENST00000587560 NCOA7Q8NI08 942 aa21.62■■□□□ 1.05
H3F3B-206ENST00000587560 NEK1Q96PY6 1258 aa21.62■■□□□ 1.05
H3F3B-206ENST00000587560 ZNF341Q9BYN7 854 aa21.62■■□□□ 1.05
H3F3B-206ENST00000587560 KRT23Q9C075 422 aa21.62■■□□□ 1.05
H3F3B-206ENST00000587560 ZNF287Q9HBT7 754 aa21.62■■□□□ 1.05
H3F3B-206ENST00000587560 IGKV6D-41A0A0C4DH26 115 aa21.61■■□□□ 1.05
H3F3B-206ENST00000587560 B4E1Z4 1266 aa21.61■■□□□ 1.05
H3F3B-206ENST00000587560 NOVP48745 357 aa21.61■■□□□ 1.05
H3F3B-206ENST00000587560 EXOSC10Q01780 885 aaKnown RBP21.61■■□□□ 1.05
H3F3B-206ENST00000587560 CYB5R4Q7L1T6 521 aa21.61■■□□□ 1.05
H3F3B-206ENST00000587560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.61■■□□□ 1.052e-9■□□□□ 8
H3F3B-206ENST00000587560 CCDC17Q96LX7 622 aa21.61■■□□□ 1.05
H3F3B-206ENST00000587560 ZSWIM5Q9P217 1185 aa21.61■■□□□ 1.05
H3F3B-206ENST00000587560 TSKSQ9UJT2 592 aa21.61■■□□□ 1.05
H3F3B-206ENST00000587560 PHIPQ8WWQ0 1821 aa21.61■■□□□ 1.05
H3F3B-206ENST00000587560 WDR19Q8NEZ3 1342 aa21.6■■□□□ 1.05
H3F3B-206ENST00000587560 GUCY1A2P33402 732 aa21.6■■□□□ 1.05
H3F3B-206ENST00000587560 NEDD1Q8NHV4 660 aa21.6■■□□□ 1.05
H3F3B-206ENST00000587560 JAKMIP1Q96N16 626 aaKnown RBP21.6■■□□□ 1.05
H3F3B-206ENST00000587560 MKNK2Q9HBH9 465 aa21.6■■□□□ 1.05
H3F3B-206ENST00000587560 AKR1B1P15121 316 aa21.59■■□□□ 1.05
H3F3B-206ENST00000587560 CAP2P40123 477 aa21.59■■□□□ 1.05
H3F3B-206ENST00000587560 SHROOM1Q2M3G4 852 aaPredicted RBP21.59■■□□□ 1.05
H3F3B-206ENST00000587560 FBXL16Q8N461 479 aa21.59■■□□□ 1.05
H3F3B-206ENST00000587560 MTA3Q9BTC8 594 aa21.59■■□□□ 1.05
H3F3B-206ENST00000587560 TCP11L1Q9NUJ3 509 aa21.59■■□□□ 1.05
H3F3B-206ENST00000587560 FZD1Q9UP38 647 aa21.59■■□□□ 1.05
H3F3B-206ENST00000587560 KDM4AO75164 1064 aa21.58■■□□□ 1.05
H3F3B-206ENST00000587560 HMGB1P09429 215 aaKnown RBP21.58■■□□□ 1.05
H3F3B-206ENST00000587560 PSMA5P28066 241 aa21.58■■□□□ 1.05
H3F3B-206ENST00000587560 CERKLQ49MI3 558 aaPredicted RBP21.58■■□□□ 1.05
H3F3B-206ENST00000587560 NOL9Q5SY16 702 aaKnown RBP21.58■■□□□ 1.05
H3F3B-206ENST00000587560 CST9Q5W186 159 aa21.58■■□□□ 1.05
H3F3B-206ENST00000587560 DHX32Q7L7V1 743 aaKnown RBP21.58■■□□□ 1.05
H3F3B-206ENST00000587560 ESR2Q92731 530 aa21.58■■□□□ 1.05
H3F3B-206ENST00000587560 IL17RBQ9NRM6 502 aa21.58■■□□□ 1.05
H3F3B-206ENST00000587560 GINM1Q9NU53 330 aa21.58■■□□□ 1.05
H3F3B-206ENST00000587560 CTNND1O60716 968 aaKnown RBP21.57■■□□□ 1.04
H3F3B-206ENST00000587560 RPS6KB1P23443 525 aa21.57■■□□□ 1.04
H3F3B-206ENST00000587560 INPP5BP32019 993 aa21.57■■□□□ 1.04
H3F3B-206ENST00000587560 SOX10P56693 466 aa21.57■■□□□ 1.04
H3F3B-206ENST00000587560 TFAP4Q01664 338 aa21.57■■□□□ 1.04
H3F3B-206ENST00000587560 TRDNQ13061 729 aa21.57■■□□□ 1.04
H3F3B-206ENST00000587560 FAM47AQ5JRC9 791 aa21.57■■□□□ 1.04
H3F3B-206ENST00000587560 LDLRAD1Q5T700 205 aa21.57■■□□□ 1.04
H3F3B-206ENST00000587560 RUFY3Q7L099 469 aa21.57■■□□□ 1.04
H3F3B-206ENST00000587560 ZNF444Q8N0Y2 327 aaPredicted RBP21.57■■□□□ 1.04
H3F3B-206ENST00000587560 TTC14Q96N46 770 aa21.57■■□□□ 1.04
H3F3B-206ENST00000587560 AGXT2Q9BYV1 514 aa21.57■■□□□ 1.04
H3F3B-206ENST00000587560 ALDH8A1Q9H2A2 487 aaPredicted RBP21.57■■□□□ 1.04
H3F3B-206ENST00000587560 PPP1R12BO60237 982 aaPredicted RBP21.56■■□□□ 1.04
H3F3B-206ENST00000587560 RANBP6O60518 1105 aaKnown RBP21.56■■□□□ 1.04
H3F3B-206ENST00000587560 CPA1P15085 419 aa21.56■■□□□ 1.04
H3F3B-206ENST00000587560 CASTP20810 708 aaKnown RBP21.56■■□□□ 1.04
H3F3B-206ENST00000587560 MCM5P33992 734 aa21.56■■□□□ 1.04
H3F3B-206ENST00000587560 NF2P35240 595 aa21.56■■□□□ 1.04
H3F3B-206ENST00000587560 FKBP1BP68106 108 aa21.56■■□□□ 1.04
H3F3B-206ENST00000587560 SEC23AQ15436 765 aa21.56■■□□□ 1.04
H3F3B-206ENST00000587560 RRP12Q5JTH9 1297 aaKnown RBP21.56■■□□□ 1.04
H3F3B-206ENST00000587560 BLOC1S2Q6QNY1 142 aa21.56■■□□□ 1.04
H3F3B-206ENST00000587560 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.56■■□□□ 1.04
H3F3B-206ENST00000587560 RALYLQ86SE5 291 aaKnown RBP21.56■■□□□ 1.04
H3F3B-206ENST00000587560 IGDCC4Q8TDY8 1250 aa21.56■■□□□ 1.04
H3F3B-206ENST00000587560 ANKS1AQ92625 1134 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms