RNA–Protein interactions for RNA: ENST00000587425.5

TCF3-211, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-211ENST00000587425 BACE1P56817 501 aa18.59■□□□□ 0.57
TCF3-211ENST00000587425 PABPC4Q13310 644 aaKnown RBP eCLIP18.59■□□□□ 0.577e-7■□□□□ 10.8
TCF3-211ENST00000587425 SH3D19Q5HYK7 790 aa18.59■□□□□ 0.57
TCF3-211ENST00000587425 FOXP4Q8IVH2 680 aaPredicted RBP18.59■□□□□ 0.57
TCF3-211ENST00000587425 U2AF1L4Q8WU68 220 aaKnown RBP18.59■□□□□ 0.57
TCF3-211ENST00000587425 DPF3Q92784 378 aa18.59■□□□□ 0.57
TCF3-211ENST00000587425 WDR18Q9BV38 432 aa18.59■□□□□ 0.57
TCF3-211ENST00000587425 TBC1D2Q9BYX2 928 aa18.59■□□□□ 0.57
TCF3-211ENST00000587425 TMOD4Q9NZQ9 345 aa18.59■□□□□ 0.57
TCF3-211ENST00000587425 COG6Q9Y2V7 657 aa18.59■□□□□ 0.57
TCF3-211ENST00000587425 GH2P01242 217 aa18.58■□□□□ 0.56
TCF3-211ENST00000587425 GCLCP48506 637 aaPredicted RBP18.58■□□□□ 0.56
TCF3-211ENST00000587425 IRX3P78415 501 aaPredicted RBP18.58■□□□□ 0.56
TCF3-211ENST00000587425 ZYXQ15942 572 aaKnown RBP18.58■□□□□ 0.56
TCF3-211ENST00000587425 METTL16Q86W50 562 aaKnown RBP18.58■□□□□ 0.56
TCF3-211ENST00000587425 ERC1Q8IUD2 1116 aa18.58■□□□□ 0.56
TCF3-211ENST00000587425 NKX2-3Q8TAU0 364 aa18.58■□□□□ 0.56
TCF3-211ENST00000587425 RHPN1Q8TCX5 695 aa18.58■□□□□ 0.56
TCF3-211ENST00000587425 P2RX7Q99572 595 aaKnown RBP18.58■□□□□ 0.56
TCF3-211ENST00000587425 FARP2O94887 1054 aaPredicted RBP18.57■□□□□ 0.56
TCF3-211ENST00000587425 EVX2Q03828 476 aa18.57■□□□□ 0.56
TCF3-211ENST00000587425 MAP3K12Q12852 859 aa18.57■□□□□ 0.56
TCF3-211ENST00000587425 TRIM32Q13049 653 aa18.57■□□□□ 0.56
TCF3-211ENST00000587425 IRF5Q13568 498 aa18.57■□□□□ 0.56
TCF3-211ENST00000587425 DEFB118Q96PH6 123 aa18.57■□□□□ 0.56
TCF3-211ENST00000587425 TXNRD2Q9NNW7 524 aa18.57■□□□□ 0.56
TCF3-211ENST00000587425 USP17L10C9JJH3 530 aa18.56■□□□□ 0.56
TCF3-211ENST00000587425 UBE2Q1Q7Z7E8 422 aa18.56■□□□□ 0.56
TCF3-211ENST00000587425 SIRT2Q8IXJ6 389 aa18.56■□□□□ 0.56
TCF3-211ENST00000587425 PXYLP1Q8TE99 480 aa18.56■□□□□ 0.56
TCF3-211ENST00000587425 EDC3Q96F86 508 aaKnown RBP18.56■□□□□ 0.56
TCF3-211ENST00000587425 DNAJC2Q99543 621 aaKnown RBP18.56■□□□□ 0.56
TCF3-211ENST00000587425 PLXNB2O15031 1838 aa18.56■□□□□ 0.56
TCF3-211ENST00000587425 SGPL1O95470 568 aa18.55■□□□□ 0.56
TCF3-211ENST00000587425 TFRCP02786 760 aaKnown RBP18.55■□□□□ 0.56
TCF3-211ENST00000587425 HERVK_113P62684 666 aa18.55■□□□□ 0.56
TCF3-211ENST00000587425 EMILIN3Q9NT22 766 aa18.55■□□□□ 0.56
TCF3-211ENST00000587425 NAV1Q8NEY1 1877 aa18.54■□□□□ 0.56
TCF3-211ENST00000587425 MAGEB6P1A0A0J9YX57 407 aa18.54■□□□□ 0.56
TCF3-211ENST00000587425 GOLIM4O00461 696 aa18.54■□□□□ 0.56
TCF3-211ENST00000587425 RAB3GAP1Q15042 981 aa18.54■□□□□ 0.56
TCF3-211ENST00000587425 SLFNL1Q499Z3 407 aa18.54■□□□□ 0.56
TCF3-211ENST00000587425 CHRDL2Q6WN34 429 aa18.54■□□□□ 0.56
TCF3-211ENST00000587425 RIOK1Q9BRS2 568 aaKnown RBP18.54■□□□□ 0.56
TCF3-211ENST00000587425 PAGR1Q9BTK6 254 aa18.54■□□□□ 0.56
TCF3-211ENST00000587425 SERPINB13Q9UIV8 391 aa18.54■□□□□ 0.56
TCF3-211ENST00000587425 GJD2Q9UKL4 321 aa18.54■□□□□ 0.56
TCF3-211ENST00000587425 C19orf81C9J6K1 198 aa18.53■□□□□ 0.56
TCF3-211ENST00000587425 PDE6AP16499 860 aa18.53■□□□□ 0.56
TCF3-211ENST00000587425 CYP2B6P20813 491 aa18.53■□□□□ 0.56
TCF3-211ENST00000587425 HOXA7P31268 230 aaPredicted RBP18.53■□□□□ 0.56
TCF3-211ENST00000587425 FXR1P51114 621 aaKnown RBP eCLIP18.53■□□□□ 0.56
TCF3-211ENST00000587425 PLCD1P51178 756 aa18.53■□□□□ 0.56
TCF3-211ENST00000587425 HSP90AB4PQ58FF6 505 aa18.53■□□□□ 0.56
TCF3-211ENST00000587425 DDX60LQ5H9U9 1706 aaKnown RBP18.53■□□□□ 0.56
TCF3-211ENST00000587425 SLC9C2Q5TAH2 1124 aa18.53■□□□□ 0.56
TCF3-211ENST00000587425 POTEEQ6S8J3 1075 aa18.53■□□□□ 0.56
TCF3-211ENST00000587425 FEZ1Q99689 392 aa18.53■□□□□ 0.56
TCF3-211ENST00000587425 ZBTB40Q9NUA8 1239 aa18.53■□□□□ 0.56
TCF3-211ENST00000587425 MORF4L1Q9UBU8 362 aa18.53■□□□□ 0.56
TCF3-211ENST00000587425 IGSF3O75054 1194 aa18.52■□□□□ 0.56
TCF3-211ENST00000587425 IFIT2P09913 472 aaKnown RBP18.52■□□□□ 0.56
TCF3-211ENST00000587425 Q3C1V9 767 aa18.52■□□□□ 0.56
TCF3-211ENST00000587425 TATDN1Q6P1N9 297 aa18.52■□□□□ 0.56
TCF3-211ENST00000587425 USP17L2Q6R6M4 530 aa18.52■□□□□ 0.56
TCF3-211ENST00000587425 CLASRPQ8N2M8 674 aaKnown RBP18.52■□□□□ 0.56
TCF3-211ENST00000587425 GPRC5AQ8NFJ5 357 aa18.52■□□□□ 0.56
TCF3-211ENST00000587425 ACER1Q8TDN7 264 aa18.52■□□□□ 0.56
TCF3-211ENST00000587425 DIS3LQ8TF46 1054 aaKnown RBP18.52■□□□□ 0.56
TCF3-211ENST00000587425 KIF1BPQ96EK5 621 aa18.52■□□□□ 0.56
TCF3-211ENST00000587425 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.52■□□□□ 0.56
TCF3-211ENST00000587425 PAK6Q9NQU5 681 aaPredicted RBP18.52■□□□□ 0.56
TCF3-211ENST00000587425 RBPJLQ9UBG7 517 aa18.52■□□□□ 0.56
TCF3-211ENST00000587425 RANBP2P49792 3224 aaKnown RBP18.51■□□□□ 0.55
TCF3-211ENST00000587425 ZNF532Q9HCE3 1301 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 TRIOBPQ9H2D6 2365 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 HMGCRP04035 888 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 POLR3DP05423 398 aaPredicted RBP18.51■□□□□ 0.55
TCF3-211ENST00000587425 CYP2D6P10635 497 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 MS4A1P11836 297 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 SHMT1P34896 483 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 ABCB5Q2M3G0 1257 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 CERKLQ49MI3 558 aaPredicted RBP18.51■□□□□ 0.55
TCF3-211ENST00000587425 C20orf194Q5TEA3 1177 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 TRIB2Q92519 343 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 HTATIP2Q9BUP3 242 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 PORCNQ9H237 461 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 GINM1Q9NU53 330 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 DDX19BQ9UMR2 479 aa18.51■□□□□ 0.55
TCF3-211ENST00000587425 HMMRO75330 724 aa18.5■□□□□ 0.55
TCF3-211ENST00000587425 CHGBP05060 677 aa18.5■□□□□ 0.55
TCF3-211ENST00000587425 TTF1Q15361 905 aaPredicted RBP18.5■□□□□ 0.55
TCF3-211ENST00000587425 TTC6Q86TZ1 520 aa18.5■□□□□ 0.55
TCF3-211ENST00000587425 RPAP2Q8IXW5 612 aaPredicted RBP18.5■□□□□ 0.55
TCF3-211ENST00000587425 LCORLQ8N3X6 602 aa18.5■□□□□ 0.55
TCF3-211ENST00000587425 SDR42E1Q8WUS8 393 aa18.5■□□□□ 0.55
TCF3-211ENST00000587425 EHD4Q9H223 541 aa18.5■□□□□ 0.55
TCF3-211ENST00000587425 PCDH10Q9P2E7 1040 aa18.5■□□□□ 0.55
TCF3-211ENST00000587425 TCRBV5S4A2TA0A5A2 114 aa18.49■□□□□ 0.55
TCF3-211ENST00000587425 ERVK-9P63128 1117 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms