RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 IFNAR1P17181 557 aa23.13■■□□□ 1.29
TRIM47-204ENST00000587339 KRT85P78386 507 aa23.13■■□□□ 1.29
TRIM47-204ENST00000587339 RESTQ13127 1097 aa23.13■■□□□ 1.29
TRIM47-204ENST00000587339 FAM173BQ6P4H8 233 aa23.13■■□□□ 1.29
TRIM47-204ENST00000587339 KLHL34Q8N239 644 aa23.13■■□□□ 1.29
TRIM47-204ENST00000587339 SGIP1Q9BQI5 828 aa23.13■■□□□ 1.29
TRIM47-204ENST00000587339 ZNF646O15015 1829 aaPredicted RBP23.13■■□□□ 1.29
TRIM47-204ENST00000587339 FOCADQ5VW36 1801 aa23.13■■□□□ 1.29
TRIM47-204ENST00000587339 PSDA5PKW4 1024 aaPredicted RBP23.12■■□□□ 1.29
TRIM47-204ENST00000587339 FIBPO43427 364 aa23.12■■□□□ 1.29
TRIM47-204ENST00000587339 CDK8P49336 464 aa23.12■■□□□ 1.29
TRIM47-204ENST00000587339 GUCY1B3Q02153 619 aa23.12■■□□□ 1.29
TRIM47-204ENST00000587339 CSPP1Q1MSJ5 1256 aa23.12■■□□□ 1.29
TRIM47-204ENST00000587339 TTC6Q86TZ1 520 aa23.12■■□□□ 1.29
TRIM47-204ENST00000587339 DDX4Q9NQI0 724 aaKnown RBP23.12■■□□□ 1.29
TRIM47-204ENST00000587339 ADAMTSL1Q8N6G6 1762 aa23.12■■□□□ 1.29
TRIM47-204ENST00000587339 CALM1P0DP23 149 aa23.12■■□□□ 1.29
TRIM47-204ENST00000587339 CALM2P0DP24 149 aa23.12■■□□□ 1.29
TRIM47-204ENST00000587339 CALM3P0DP25 149 aa23.12■■□□□ 1.29
TRIM47-204ENST00000587339 FBXO18Q8NFZ0 1043 aa23.12■■□□□ 1.29
TRIM47-204ENST00000587339 CD2APQ9Y5K6 639 aa23.12■■□□□ 1.29
TRIM47-204ENST00000587339 MYH1P12882 1939 aa23.11■■□□□ 1.29
TRIM47-204ENST00000587339 RASA1P20936 1047 aa23.11■■□□□ 1.29
TRIM47-204ENST00000587339 SSRP1Q08945 709 aaKnown RBP23.11■■□□□ 1.29
TRIM47-204ENST00000587339 TROAPQ12815 778 aa23.11■■□□□ 1.29
TRIM47-204ENST00000587339 MYO3BQ8WXR4 1341 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 STK36Q9NRP7 1315 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 DDAH1O94760 285 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 MBD3O95983 291 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 CCDC178Q5BJE1 867 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 DGKHQ86XP1 1220 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 GPT2Q8TD30 523 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 ALG1Q9BT22 464 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 SLC26A6Q9BXS9 759 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 OSBPL5Q9H0X9 879 aaPredicted RBP23.1■■□□□ 1.29
TRIM47-204ENST00000587339 IL17RBQ9NRM6 502 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 TCHHQ07283 1943 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 FMNL1O95466 1100 aaPredicted RBP23.1■■□□□ 1.29
TRIM47-204ENST00000587339 RCSD1Q6JBY9 416 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 TRIM22Q8IYM9 498 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 RGS22Q8NE09 1264 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 TCP11L1Q9NUJ3 509 aa23.1■■□□□ 1.29
TRIM47-204ENST00000587339 RAD17O75943 681 aa23.09■■□□□ 1.29
TRIM47-204ENST00000587339 PCDHAC2Q9Y5I4 1007 aa23.09■■□□□ 1.29
TRIM47-204ENST00000587339 NFIAQ12857 509 aa23.08■■□□□ 1.29
TRIM47-204ENST00000587339 OTUD7BQ6GQQ9 843 aa23.08■■□□□ 1.29
TRIM47-204ENST00000587339 RSBN1LQ6PCB5 846 aaPredicted RBP23.08■■□□□ 1.29
TRIM47-204ENST00000587339 NIM1KQ8IY84 436 aa23.08■■□□□ 1.29
TRIM47-204ENST00000587339 CCDC82Q8N4S0 544 aa23.08■■□□□ 1.29
TRIM47-204ENST00000587339 WASF1Q92558 559 aa23.08■■□□□ 1.29
TRIM47-204ENST00000587339 KAT14Q9H8E8 782 aa23.08■■□□□ 1.29
TRIM47-204ENST00000587339 RBM28Q9NW13 759 aaKnown RBP23.08■■□□□ 1.29
TRIM47-204ENST00000587339 CMTR1Q8N1G2 835 aaKnown RBP23.08■■□□□ 1.28
TRIM47-204ENST00000587339 CRACR2BQ8N4Y2 399 aaPredicted RBP23.08■■□□□ 1.28
TRIM47-204ENST00000587339 AIFM3Q96NN9 605 aa23.08■■□□□ 1.28
TRIM47-204ENST00000587339 SCAND2PQ9GZW5 306 aaPredicted RBP23.08■■□□□ 1.28
TRIM47-204ENST00000587339 TAOK3Q9H2K8 898 aa23.08■■□□□ 1.28
TRIM47-204ENST00000587339 GJB4Q9NTQ9 266 aa23.08■■□□□ 1.28
TRIM47-204ENST00000587339 ZNRF3Q9ULT6 936 aa23.08■■□□□ 1.28
TRIM47-204ENST00000587339 COL4A5P29400 1685 aa23.08■■□□□ 1.28
TRIM47-204ENST00000587339 PSMD14O00487 310 aa23.07■■□□□ 1.28
TRIM47-204ENST00000587339 GADD45BO75293 160 aaPredicted RBP23.07■■□□□ 1.28
TRIM47-204ENST00000587339 VIL1P09327 827 aaKnown RBP23.07■■□□□ 1.28
TRIM47-204ENST00000587339 PTGER2P43116 358 aa23.07■■□□□ 1.28
TRIM47-204ENST00000587339 NBPF11Q86T75 865 aa23.07■■□□□ 1.28
TRIM47-204ENST00000587339 ANKS1AQ92625 1134 aa23.07■■□□□ 1.28
TRIM47-204ENST00000587339 SERPINB13Q9UIV8 391 aa23.07■■□□□ 1.28
TRIM47-204ENST00000587339 HLA-DOAP06340 250 aa23.06■■□□□ 1.28
TRIM47-204ENST00000587339 GABPAQ06546 454 aa23.06■■□□□ 1.28
TRIM47-204ENST00000587339 CAVIN1Q6NZI2 390 aaKnown RBP23.06■■□□□ 1.28
TRIM47-204ENST00000587339 CTCFLQ8NI51 663 aaPredicted RBP23.06■■□□□ 1.28
TRIM47-204ENST00000587339 IDI2Q9BXS1 227 aa23.06■■□□□ 1.28
TRIM47-204ENST00000587339 TFIP11Q9UBB9 837 aaKnown RBP23.06■■□□□ 1.28
TRIM47-204ENST00000587339 CACNB3P54284 484 aa23.06■■□□□ 1.28
TRIM47-204ENST00000587339 UBE2HP62256 183 aa23.06■■□□□ 1.28
TRIM47-204ENST00000587339 TRIM29Q14134 588 aa23.06■■□□□ 1.28
TRIM47-204ENST00000587339 CFAP100Q494V2 611 aa23.06■■□□□ 1.28
TRIM47-204ENST00000587339 NEDD1Q8NHV4 660 aa23.06■■□□□ 1.28
TRIM47-204ENST00000587339 CFAP45Q9UL16 551 aa23.06■■□□□ 1.28
TRIM47-204ENST00000587339 STX8Q9UNK0 236 aa23.06■■□□□ 1.28
TRIM47-204ENST00000587339 BCS1LQ9Y276 419 aa23.06■■□□□ 1.28
TRIM47-204ENST00000587339 BRCA1P38398 1863 aaKnown RBP23.06■■□□□ 1.28
TRIM47-204ENST00000587339 PSME4Q14997 1843 aa23.05■■□□□ 1.28
TRIM47-204ENST00000587339 DEXIO95424 95 aa23.05■■□□□ 1.28
TRIM47-204ENST00000587339 ECM29Q5VYK3 1845 aa23.04■■□□□ 1.28
TRIM47-204ENST00000587339 DEKP35659 375 aaKnown RBP23.04■■□□□ 1.28
TRIM47-204ENST00000587339 OGFOD1Q8N543 542 aa23.04■■□□□ 1.28
TRIM47-204ENST00000587339 PNMA1Q8ND90 353 aa23.04■■□□□ 1.28
TRIM47-204ENST00000587339 SPATA32Q96LK8 384 aa23.04■■□□□ 1.28
TRIM47-204ENST00000587339 RNF26Q9BY78 433 aaPredicted RBP23.04■■□□□ 1.28
TRIM47-204ENST00000587339 SWAP70Q9UH65 585 aa23.04■■□□□ 1.28
TRIM47-204ENST00000587339 TAOK2Q9UL54 1235 aa23.04■■□□□ 1.28
TRIM47-204ENST00000587339 UBE2Q2LH0YL09 131 aa23.04■■□□□ 1.28
TRIM47-204ENST00000587339 TCP10Q12799 353 aa23.04■■□□□ 1.28
TRIM47-204ENST00000587339 KRT40Q6A162 431 aa23.04■■□□□ 1.28
TRIM47-204ENST00000587339 JDP2Q8WYK2 163 aa23.04■■□□□ 1.28
TRIM47-204ENST00000587339 DHX36Q9H2U1 1008 aaKnown RBP23.04■■□□□ 1.28
TRIM47-204ENST00000587339 HDAC9Q9UKV0 1011 aa23.04■■□□□ 1.28
TRIM47-204ENST00000587339 ELP1O95163 1332 aa23.03■■□□□ 1.28
TRIM47-204ENST00000587339 GUCY1A2P33402 732 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms