RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 WDR66Q8TBY9 1149 aa16■□□□□ 0.15
SMARCA4-211ENST00000586921 DNAAF4Q8WXU2 420 aa16■□□□□ 0.15
SMARCA4-211ENST00000586921 FERMT2Q96AC1 680 aa16■□□□□ 0.15
SMARCA4-211ENST00000586921 EDC3Q96F86 508 aaKnown RBP16■□□□□ 0.15
SMARCA4-211ENST00000586921 IDI2Q9BXS1 227 aa16■□□□□ 0.15
SMARCA4-211ENST00000586921 DDTLA6NHG4 134 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-211ENST00000586921 GRXCR1A8MXD5 290 aa15.99■□□□□ 0.15
SMARCA4-211ENST00000586921 KIAA0355O15063 1070 aa15.99■□□□□ 0.15
SMARCA4-211ENST00000586921 ATP2B2Q01814 1243 aa15.99■□□□□ 0.15
SMARCA4-211ENST00000586921 SH3D19Q5HYK7 790 aa15.99■□□□□ 0.15
SMARCA4-211ENST00000586921 TSPYL6Q8N831 410 aa15.99■□□□□ 0.15
SMARCA4-211ENST00000586921 KHSRPQ92945 711 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMARCA4-211ENST00000586921 MYH13Q9UKX3 1938 aa15.98■□□□□ 0.15
SMARCA4-211ENST00000586921 ERC2O15083 957 aa15.98■□□□□ 0.15
SMARCA4-211ENST00000586921 GLRX3O76003 335 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-211ENST00000586921 CENPBP07199 599 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-211ENST00000586921 CYP2C19P33261 490 aa15.98■□□□□ 0.15
SMARCA4-211ENST00000586921 Q3C1V9 767 aa15.98■□□□□ 0.15
SMARCA4-211ENST00000586921 TRPV1Q8NER1 839 aa15.98■□□□□ 0.15
SMARCA4-211ENST00000586921 PAGR1Q9BTK6 254 aa15.98■□□□□ 0.15
SMARCA4-211ENST00000586921 RBPJLQ9UBG7 517 aa15.98■□□□□ 0.15
SMARCA4-211ENST00000586921 USP17L5A8MUK1 530 aa15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 PRR33A8MZF0 331 aa15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 PRDX5P30044 214 aa15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 HOXA7P31268 230 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 CALD1Q05682 793 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 FKBP5Q13451 457 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 RAB30Q15771 203 aa15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 ANO1Q5XXA6 986 aa15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 OSBPL5Q9H0X9 879 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 TMOD4Q9NZQ9 345 aa15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 MSRAQ9UJ68 235 aa15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 RFX7Q2KHR2 1363 aa15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 WDFY4Q6ZS81 3184 aa15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 LRRC37A2A6NM11 1700 aa15.97■□□□□ 0.15
SMARCA4-211ENST00000586921 ATAD5Q96QE3 1844 aa15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 PQBP1O60828 265 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 CYBAP13498 195 aa15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 FLIIQ13045 1269 aa15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 MTMR2Q13614 643 aa15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 METTL24Q5JXM2 366 aa15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 GTF3C2Q8WUA4 911 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 HERVK_113Q902F9 699 aa15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 AS3MTQ9HBK9 375 aa15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 TMEM39AQ9NV64 488 aa15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 NDUFB9Q9Y6M9 179 aa15.96■□□□□ 0.15
SMARCA4-211ENST00000586921 FAM196BA6NMK8 535 aa15.95■□□□□ 0.14
SMARCA4-211ENST00000586921 PI4K2BG5E9Z4 385 aa15.95■□□□□ 0.14
SMARCA4-211ENST00000586921 TBC1D12O60347 775 aa15.95■□□□□ 0.14
SMARCA4-211ENST00000586921 LDHBP07195 334 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-211ENST00000586921 PICALMQ13492 652 aa15.95■□□□□ 0.14
SMARCA4-211ENST00000586921 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-211ENST00000586921 WDR78Q5VTH9 848 aa15.95■□□□□ 0.14
SMARCA4-211ENST00000586921 CCDC174Q6PII3 467 aa15.95■□□□□ 0.14
SMARCA4-211ENST00000586921 UIMC1Q96RL1 719 aa15.95■□□□□ 0.14
SMARCA4-211ENST00000586921 SLC28A3Q9HAS3 691 aa15.95■□□□□ 0.14
SMARCA4-211ENST00000586921 ZDBF2Q9HCK1 2354 aa15.94■□□□□ 0.14
SMARCA4-211ENST00000586921 SLC15A5A6NIM6 579 aa15.94■□□□□ 0.14
SMARCA4-211ENST00000586921 LRRC41Q15345 812 aa15.94■□□□□ 0.14
SMARCA4-211ENST00000586921 NKX2-4Q9H2Z4 354 aa15.94■□□□□ 0.14
SMARCA4-211ENST00000586921 DDX4Q9NQI0 724 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-211ENST00000586921 KIF16BQ96L93 1317 aa15.94■□□□□ 0.14
SMARCA4-211ENST00000586921 TLL1O43897 1013 aa15.93■□□□□ 0.14
SMARCA4-211ENST00000586921 PDE8BO95263 885 aa15.93■□□□□ 0.14
SMARCA4-211ENST00000586921 HOXC6P09630 235 aa15.93■□□□□ 0.14
SMARCA4-211ENST00000586921 IFIT1P09914 478 aaKnown RBP15.93■□□□□ 0.14
SMARCA4-211ENST00000586921 CAP2P40123 477 aa15.93■□□□□ 0.14
SMARCA4-211ENST00000586921 BACE1P56817 501 aa15.93■□□□□ 0.14
SMARCA4-211ENST00000586921 CCNA1P78396 465 aa15.93■□□□□ 0.14
SMARCA4-211ENST00000586921 VGLL2Q8N8G2 317 aa15.93■□□□□ 0.14
SMARCA4-211ENST00000586921 SLC44A5Q8NCS7 719 aa15.93■□□□□ 0.14
SMARCA4-211ENST00000586921 IVNS1ABPQ9Y6Y0 642 aa15.93■□□□□ 0.14
SMARCA4-211ENST00000586921 PRRC2BQ5JSZ5 2229 aaKnown RBP15.92■□□□□ 0.14
SMARCA4-211ENST00000586921 TRANK1O15050 2925 aa15.92■□□□□ 0.14
SMARCA4-211ENST00000586921 SEPT4O43236 478 aa15.92■□□□□ 0.14
SMARCA4-211ENST00000586921 PTPREP23469 700 aa15.92■□□□□ 0.14
SMARCA4-211ENST00000586921 PPIGQ13427 754 aaKnown RBP eCLIP15.92■□□□□ 0.142e-6■□□□□ 8.5
SMARCA4-211ENST00000586921 TMEM240Q5SV17 173 aa15.92■□□□□ 0.14
SMARCA4-211ENST00000586921 RASIP1Q5U651 963 aa15.92■□□□□ 0.14
SMARCA4-211ENST00000586921 NPLOC4Q8TAT6 608 aa15.92■□□□□ 0.14
SMARCA4-211ENST00000586921 FBXL18Q96ME1 805 aa15.92■□□□□ 0.14
SMARCA4-211ENST00000586921 COG5Q9UP83 839 aa15.92■□□□□ 0.14
SMARCA4-211ENST00000586921 PHF24Q9UPV7 400 aa15.92■□□□□ 0.14
SMARCA4-211ENST00000586921 GRM8O00222 908 aa15.91■□□□□ 0.14
SMARCA4-211ENST00000586921 PUM3Q15397 648 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-211ENST00000586921 LRRC24Q50LG9 513 aa15.91■□□□□ 0.14
SMARCA4-211ENST00000586921 MYH2Q9UKX2 1941 aa15.91■□□□□ 0.14
SMARCA4-211ENST00000586921 CFAP54Q96N23 3096 aa15.91■□□□□ 0.14
SMARCA4-211ENST00000586921 TIMP1P01033 207 aa15.9■□□□□ 0.14
SMARCA4-211ENST00000586921 FOXK2Q01167 660 aa15.9■□□□□ 0.14
SMARCA4-211ENST00000586921 FAAP100Q0VG06 881 aa15.9■□□□□ 0.14
SMARCA4-211ENST00000586921 GRB14Q14449 540 aa15.9■□□□□ 0.14
SMARCA4-211ENST00000586921 WDR43Q15061 677 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMARCA4-211ENST00000586921 FAM47AQ5JRC9 791 aa15.9■□□□□ 0.14
SMARCA4-211ENST00000586921 C16orf59Q7L2K0 433 aa15.9■□□□□ 0.14
SMARCA4-211ENST00000586921 WDR18Q9BV38 432 aa15.9■□□□□ 0.14
SMARCA4-211ENST00000586921 KCNH6Q9H252 994 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms