RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 SHROOM1Q2M3G4 852 aaPredicted RBP10.41□□□□□ -0.74
ATG4D-202ENST00000585437 TTC6Q86TZ1 520 aa10.41□□□□□ -0.74
ATG4D-202ENST00000585437 CCDC84Q86UT8 332 aaPredicted RBP10.41□□□□□ -0.74
ATG4D-202ENST00000585437 CRACR2BQ8N4Y2 399 aaPredicted RBP10.41□□□□□ -0.74
ATG4D-202ENST00000585437 APPBP2Q92624 585 aa10.41□□□□□ -0.74
ATG4D-202ENST00000585437 PUS7LQ9H0K6 701 aaKnown RBP10.41□□□□□ -0.74
ATG4D-202ENST00000585437 RWDD1Q9H446 243 aaPredicted RBP10.41□□□□□ -0.74
ATG4D-202ENST00000585437 ATP8A2Q9NTI2 1148 aa10.41□□□□□ -0.74
ATG4D-202ENST00000585437 ZBTB21Q9ULJ3 1066 aa10.41□□□□□ -0.74
ATG4D-202ENST00000585437 SLC45A1Q9Y2W3 748 aa10.41□□□□□ -0.74
ATG4D-202ENST00000585437 COL11A1P12107 1806 aaPredicted RBP10.4□□□□□ -0.74
ATG4D-202ENST00000585437 ZFYP08048 801 aaPredicted RBP10.4□□□□□ -0.74
ATG4D-202ENST00000585437 SHMT1P34896 483 aa10.4□□□□□ -0.74
ATG4D-202ENST00000585437 PDE1AP54750 535 aa10.4□□□□□ -0.74
ATG4D-202ENST00000585437 NUCB1Q02818 461 aa10.4□□□□□ -0.74
ATG4D-202ENST00000585437 SH3D19Q5HYK7 790 aa10.4□□□□□ -0.74
ATG4D-202ENST00000585437 ANKRD45Q5TZF3 282 aa10.4□□□□□ -0.74
ATG4D-202ENST00000585437 PROCA1Q8NCQ7 364 aaPredicted RBP10.4□□□□□ -0.74
ATG4D-202ENST00000585437 ZNF280CQ8ND82 737 aa10.4□□□□□ -0.74
ATG4D-202ENST00000585437 WDR18Q9BV38 432 aa10.4□□□□□ -0.74
ATG4D-202ENST00000585437 ZFYVE28Q9HCC9 887 aa10.4□□□□□ -0.74
ATG4D-202ENST00000585437 BRCA2P51587 3418 aa10.4□□□□□ -0.75
ATG4D-202ENST00000585437 DOCK3Q8IZD9 2030 aa10.4□□□□□ -0.75
ATG4D-202ENST00000585437 TRIM75PA6NK02 468 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 USP17L5A8MUK1 530 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 PDHXO00330 501 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 RNF113AO15541 343 aaKnown RBP10.39□□□□□ -0.75
ATG4D-202ENST00000585437 PRKAB2O43741 272 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 GDF11O95390 407 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 SP3Q02447 781 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 PKN2Q16513 984 aaKnown RBP10.39□□□□□ -0.75
ATG4D-202ENST00000585437 SLC4A8Q2Y0W8 1093 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 C17orf99Q6UX52 265 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 CENPQQ7L2Z9 268 aaPredicted RBP10.39□□□□□ -0.75
ATG4D-202ENST00000585437 FASTKD5Q7L8L6 764 aaKnown RBP10.39□□□□□ -0.75
ATG4D-202ENST00000585437 TICAM2Q86XR7 235 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 OSBP2Q969R2 916 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 ERO1AQ96HE7 468 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 STRBPQ96SI9 672 aaKnown RBP10.39□□□□□ -0.75
ATG4D-202ENST00000585437 OSBPL3Q9H4L5 887 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 AS3MTQ9HBK9 375 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 MCM9Q9NXL9 1143 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 AGTPBP1Q9UPW5 1226 aa10.39□□□□□ -0.75
ATG4D-202ENST00000585437 TNRC18O15417 2968 aaPredicted RBP10.38□□□□□ -0.75
ATG4D-202ENST00000585437 BCRP11274 1271 aa10.38□□□□□ -0.75
ATG4D-202ENST00000585437 SPP2Q13103 211 aa10.38□□□□□ -0.75
ATG4D-202ENST00000585437 C12orf60Q5U649 245 aa10.38□□□□□ -0.75
ATG4D-202ENST00000585437 GIMAP6Q6P9H5 292 aa10.38□□□□□ -0.75
ATG4D-202ENST00000585437 OTOP1Q7RTM1 612 aa10.38□□□□□ -0.75
ATG4D-202ENST00000585437 CHD1LQ86WJ1 897 aa10.38□□□□□ -0.75
ATG4D-202ENST00000585437 PARK7Q99497 189 aaKnown RBP10.38□□□□□ -0.75
ATG4D-202ENST00000585437 TRIM34Q9BYJ4 488 aa10.38□□□□□ -0.75
ATG4D-202ENST00000585437 LNPKQ9C0E8 428 aa10.38□□□□□ -0.75
ATG4D-202ENST00000585437 EPB41L4AQ9HCS5 686 aaPredicted RBP10.38□□□□□ -0.75
ATG4D-202ENST00000585437 ARPP21Q9UBL0 812 aaPredicted RBP10.38□□□□□ -0.75
ATG4D-202ENST00000585437 ZNF236Q9UL36 1845 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 GSG1L2A8MUP6 293 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 SMIM22K7EJ46 135 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 M0R2C6 588 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 GPAA1O43292 621 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 GH2P01242 217 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 POLR3DP05423 398 aaPredicted RBP10.37□□□□□ -0.75
ATG4D-202ENST00000585437 CYP2D6P10635 497 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 GUCY1A2P33402 732 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 HMGCS2P54868 508 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 BACE1P56817 501 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 LACTBP83111 547 aaPredicted RBP10.37□□□□□ -0.75
ATG4D-202ENST00000585437 MTMR2Q13614 643 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 LRRFIP1Q32MZ4 808 aaKnown RBP10.37□□□□□ -0.75
ATG4D-202ENST00000585437 SBK1Q52WX2 424 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 ZMYM1Q5SVZ6 1142 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 TREML2Q5T2D2 321 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 FBXO46Q6PJ61 603 aaPredicted RBP10.37□□□□□ -0.75
ATG4D-202ENST00000585437 GADL1Q6ZQY3 521 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 C16orf86Q6ZW13 317 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 CD99L2Q8TCZ2 262 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 C12orf42Q96LP6 360 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 FSD1Q9BTV5 496 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
ATG4D-202ENST00000585437 SWAP70Q9UH65 585 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 RBM19Q9Y4C8 960 aaKnown RBP10.37□□□□□ -0.75
ATG4D-202ENST00000585437 SLC4A4Q9Y6R1 1079 aa10.37□□□□□ -0.75
ATG4D-202ENST00000585437 CYP2D7A0A087X1C5 515 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 C19orf81C9J6K1 198 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 USP17L12C9JPN9 530 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 USP17L21D6R901 530 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 FOXP2O15409 715 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 CYP2C8P10632 490 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 GNAT2P19087 354 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 ABCB5Q2M3G0 1257 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 CERKLQ49MI3 558 aaPredicted RBP10.36□□□□□ -0.75
ATG4D-202ENST00000585437 CTR9Q6PD62 1173 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 PLEKHM2Q8IWE5 1019 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 SLC44A5Q8NCS7 719 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 EVI5LQ96CN4 794 aa10.36□□□□□ -0.75
ATG4D-202ENST00000585437 SEC62Q99442 399 aaKnown RBP10.36□□□□□ -0.75
ATG4D-202ENST00000585437 FRMPD3Q5JV73 1810 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 USP17L10C9JJH3 530 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 GNRH1P01148 92 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 CTGFP29279 349 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms