RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
PRKCSH-201ENST00000585325 ANKRD13CQ8N6S4 541 aa16.28■□□□□ 0.2
PRKCSH-201ENST00000585325 TNPO2O14787 897 aaKnown RBP16.27■□□□□ 0.2
PRKCSH-201ENST00000585325 ASNSP08243 561 aa16.27■□□□□ 0.2
PRKCSH-201ENST00000585325 PABPC4Q13310 644 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRKCSH-201ENST00000585325 MTMR2Q13614 643 aa16.27■□□□□ 0.2
PRKCSH-201ENST00000585325 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
PRKCSH-201ENST00000585325 METTL16Q86W50 562 aaKnown RBP16.27■□□□□ 0.2
PRKCSH-201ENST00000585325 SIRT2Q8IXJ6 389 aa16.27■□□□□ 0.2
PRKCSH-201ENST00000585325 BIN2Q9UBW5 565 aaPredicted RBP16.27■□□□□ 0.2
PRKCSH-201ENST00000585325 GABRQQ9UN88 632 aa16.27■□□□□ 0.2
PRKCSH-201ENST00000585325 RAB11FIP3O75154 756 aa16.26■□□□□ 0.19
PRKCSH-201ENST00000585325 JAG1P78504 1218 aa16.26■□□□□ 0.19
PRKCSH-201ENST00000585325 MTFR1Q15390 333 aa16.26■□□□□ 0.19
PRKCSH-201ENST00000585325 SHROOM1Q2M3G4 852 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-201ENST00000585325 SH3D19Q5HYK7 790 aa16.26■□□□□ 0.19
PRKCSH-201ENST00000585325 TMED8Q6PL24 325 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-201ENST00000585325 DNAJC2Q99543 621 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-201ENST00000585325 WDR18Q9BV38 432 aa16.26■□□□□ 0.19
PRKCSH-201ENST00000585325 PRO3102Q9H379 93 aa16.26■□□□□ 0.19
PRKCSH-201ENST00000585325 TMOD4Q9NZQ9 345 aa16.26■□□□□ 0.19
PRKCSH-201ENST00000585325 SLAIN1Q8ND83 568 aa16.25■□□□□ 0.19
PRKCSH-201ENST00000585325 GINM1Q9NU53 330 aa16.25■□□□□ 0.19
PRKCSH-201ENST00000585325 ZBTB21Q9ULJ3 1066 aa16.25■□□□□ 0.19
PRKCSH-201ENST00000585325 MAGEB6P1A0A0J9YX57 407 aa16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 GOLIM4O00461 696 aa16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 GCLCP48506 637 aaPredicted RBP16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 FLT3LGP49771 235 aa16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 BACE1P56817 501 aa16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 UBXN2AP68543 259 aa16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 FAM110CQ1W6H9 321 aa16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 SLC9C2Q5TAH2 1124 aa16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 C20orf194Q5TEA3 1177 aa16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 ASCC2Q9H1I8 757 aaPredicted RBP16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 TAOK2Q9UL54 1235 aa16.24■□□□□ 0.19
PRKCSH-201ENST00000585325 NAV1Q8NEY1 1877 aa16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 C19orf81C9J6K1 198 aa16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 USP17L10C9JJH3 530 aa16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 ADCY3O60266 1144 aa16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 PDE6AP16499 860 aa16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 IRX3P78415 501 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 PDE3AQ14432 1141 aa16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 COA7Q96BR5 231 aa16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 RIOK1Q9BRS2 568 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 HTATIP2Q9BUP3 242 aa16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 SERPINB13Q9UIV8 391 aa16.23■□□□□ 0.19
PRKCSH-201ENST00000585325 ZNF532Q9HCE3 1301 aa16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 GH2P01242 217 aa16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 POLR3DP05423 398 aaPredicted RBP16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 CCL5P13501 91 aa16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 TATDN1Q6P1N9 297 aa16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 UBE2Q1Q7Z7E8 422 aa16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 NKX2-3Q8TAU0 364 aa16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 EDC3Q96F86 508 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 RNF208Q9H0X6 261 aa16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 EHD4Q9H223 541 aa16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 BOLA2Q9H3K6 86 aa16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 DDX60LQ5H9U9 1706 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-201ENST00000585325 ELNP15502 786 aa16.21■□□□□ 0.19
PRKCSH-201ENST00000585325 GJA8P48165 433 aa16.21■□□□□ 0.19
PRKCSH-201ENST00000585325 IRF5Q13568 498 aa16.21■□□□□ 0.19
PRKCSH-201ENST00000585325 CRNKL1Q9BZJ0 848 aaKnown RBP16.21■□□□□ 0.19
PRKCSH-201ENST00000585325 NR2E3Q9Y5X4 410 aa16.21■□□□□ 0.19
PRKCSH-201ENST00000585325 SOX1O00570 391 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-201ENST00000585325 HOXA7P31268 230 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-201ENST00000585325 PLCD1P51178 756 aa16.2■□□□□ 0.18
PRKCSH-201ENST00000585325 RAB3GAP1Q15042 981 aa16.2■□□□□ 0.18
PRKCSH-201ENST00000585325 ZYXQ15942 572 aaKnown RBP16.2■□□□□ 0.18
PRKCSH-201ENST00000585325 CERKLQ49MI3 558 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-201ENST00000585325 PXYLP1Q8TE99 480 aa16.2■□□□□ 0.18
PRKCSH-201ENST00000585325 FEZ1Q99689 392 aa16.2■□□□□ 0.18
PRKCSH-201ENST00000585325 LRRCC1Q9C099 1032 aa16.2■□□□□ 0.18
PRKCSH-201ENST00000585325 UNC93B1Q9H1C4 597 aa16.2■□□□□ 0.18
PRKCSH-201ENST00000585325 PAG1Q9NWQ8 432 aa16.2■□□□□ 0.18
PRKCSH-201ENST00000585325 TCRBV5S4A2TA0A5A2 114 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 INHAP05111 366 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 GJB1P08034 283 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 ATP5JP18859 108 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 HERVK_113P62684 666 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 ABCB5Q2M3G0 1257 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 USP17L2Q6R6M4 530 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 LCORLQ8N3X6 602 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 SDR42E1Q8WUS8 393 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 LRCH3Q96II8 777 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 P2RX7Q99572 595 aaKnown RBP16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 CABP5Q9NP86 173 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 EMILIN3Q9NT22 766 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 MCM9Q9NXL9 1143 aa16.19■□□□□ 0.18
PRKCSH-201ENST00000585325 RANBP2P49792 3224 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-201ENST00000585325 A0A1W2PPC1 479 aa16.18■□□□□ 0.18
PRKCSH-201ENST00000585325 SMARCA5O60264 1052 aaPredicted RBP16.18■□□□□ 0.18
PRKCSH-201ENST00000585325 SHMT1P34896 483 aa16.18■□□□□ 0.18
PRKCSH-201ENST00000585325 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.18■□□□□ 0.181e-8■■□□□ 13.5
PRKCSH-201ENST00000585325 ARMT1Q9H993 441 aa16.18■□□□□ 0.18
PRKCSH-201ENST00000585325 MORF4L1Q9UBU8 362 aa16.18■□□□□ 0.18
PRKCSH-201ENST00000585325 PEX10O60683 326 aa16.17■□□□□ 0.18
PRKCSH-201ENST00000585325 FARP2O94887 1054 aaPredicted RBP16.17■□□□□ 0.18
PRKCSH-201ENST00000585325 ADD2P35612 726 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms